RNA–Protein interactions for RNA: ENST00000525009.5

ATG13-204, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-204ENST00000525009 SYNE3Q6ZMZ3 975 aa12.52□□□□□ -0.41
ATG13-204ENST00000525009 SGMS1Q86VZ5 419 aa12.52□□□□□ -0.41
ATG13-204ENST00000525009 STK11IPQ8N1F8 1099 aa12.52□□□□□ -0.41
ATG13-204ENST00000525009 MXD3Q9BW11 206 aa12.52□□□□□ -0.41
ATG13-204ENST00000525009 RRAGCQ9HB90 399 aa12.52□□□□□ -0.41
ATG13-204ENST00000525009 GPHNQ9NQX3 736 aaPredicted RBP12.52□□□□□ -0.41
ATG13-204ENST00000525009 BRPF3Q9ULD4 1205 aa12.52□□□□□ -0.41
ATG13-204ENST00000525009 ZDHHC9Q9Y397 364 aa12.52□□□□□ -0.41
ATG13-204ENST00000525009 CCDC69A6NI79 296 aa12.51□□□□□ -0.41
ATG13-204ENST00000525009 GOLGA6L22H0YM25 854 aa12.51□□□□□ -0.41
ATG13-204ENST00000525009 STX6O43752 255 aa12.51□□□□□ -0.41
ATG13-204ENST00000525009 POLR3DP05423 398 aaPredicted RBP12.51□□□□□ -0.41
ATG13-204ENST00000525009 SYT1P21579 422 aa12.51□□□□□ -0.41
ATG13-204ENST00000525009 CCT2P78371 535 aaKnown RBP12.51□□□□□ -0.41
ATG13-204ENST00000525009 LARP1BQ659C4 914 aaKnown RBP12.51□□□□□ -0.41
ATG13-204ENST00000525009 NFXL1Q6ZNB6 911 aa12.51□□□□□ -0.41
ATG13-204ENST00000525009 LARGE2Q8N3Y3 721 aa12.51□□□□□ -0.41
ATG13-204ENST00000525009 SMARCC2Q8TAQ2 1214 aa12.51□□□□□ -0.41
ATG13-204ENST00000525009 NKX2-3Q8TAU0 364 aa12.51□□□□□ -0.41
ATG13-204ENST00000525009 UBAC1Q9BSL1 405 aa12.51□□□□□ -0.41
ATG13-204ENST00000525009 LY9Q9HBG7 655 aa12.51□□□□□ -0.41
ATG13-204ENST00000525009 ZNF287Q9HBT7 754 aa12.51□□□□□ -0.41
ATG13-204ENST00000525009 KCNQ5Q9NR82 932 aa12.51□□□□□ -0.41
ATG13-204ENST00000525009 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.51□□□□□ -0.41
ATG13-204ENST00000525009 KIF3AQ9Y496 699 aa12.51□□□□□ -0.41
ATG13-204ENST00000525009 GOLGA8BA8MQT2 603 aa12.5□□□□□ -0.41
ATG13-204ENST00000525009 RANBP6O60518 1105 aaKnown RBP12.5□□□□□ -0.41
ATG13-204ENST00000525009 BAG4O95429 457 aaKnown RBP12.5□□□□□ -0.41
ATG13-204ENST00000525009 ZSCAN22P10073 491 aaPredicted RBP12.5□□□□□ -0.41
ATG13-204ENST00000525009 CYP2D6P10635 497 aa12.5□□□□□ -0.41
ATG13-204ENST00000525009 CRKP46108 304 aa12.5□□□□□ -0.41
ATG13-204ENST00000525009 SCNN1DP51172 638 aa12.5□□□□□ -0.41
ATG13-204ENST00000525009 WTAPQ15007 396 aa12.5□□□□□ -0.41
ATG13-204ENST00000525009 IQCA1Q86XH1 822 aa12.5□□□□□ -0.41
ATG13-204ENST00000525009 MAPKAPK5Q8IW41 473 aa12.5□□□□□ -0.41
ATG13-204ENST00000525009 FAM184AQ8NB25 1140 aa12.5□□□□□ -0.41
ATG13-204ENST00000525009 ZDHHC15Q96MV8 337 aa12.5□□□□□ -0.41
ATG13-204ENST00000525009 USP40Q9NVE5 1235 aa12.5□□□□□ -0.41
ATG13-204ENST00000525009 SLC12A7Q9Y666 1083 aa12.5□□□□□ -0.41
ATG13-204ENST00000525009 MYO3BQ8WXR4 1341 aa12.5□□□□□ -0.41
ATG13-204ENST00000525009 ROBO3Q96MS0 1386 aa12.49□□□□□ -0.41
ATG13-204ENST00000525009 FLT1P17948 1338 aa12.49□□□□□ -0.41
ATG13-204ENST00000525009 YDJCA8MPS7 323 aa12.49□□□□□ -0.41
ATG13-204ENST00000525009 CPLX1O14810 134 aa12.49□□□□□ -0.41
ATG13-204ENST00000525009 ZBTB43O43298 467 aa12.49□□□□□ -0.41
ATG13-204ENST00000525009 IARSP41252 1262 aaKnown RBP12.49□□□□□ -0.41
ATG13-204ENST00000525009 RCAN1P53805 252 aa12.49□□□□□ -0.41
ATG13-204ENST00000525009 CPLX2Q6PUV4 134 aaKnown RBP12.49□□□□□ -0.41
ATG13-204ENST00000525009 APOA5Q6Q788 366 aa12.49□□□□□ -0.41
ATG13-204ENST00000525009 KIAA0825Q8IV33 1275 aa12.49□□□□□ -0.41
ATG13-204ENST00000525009 NSUN7Q8NE18 718 aaKnown RBP12.49□□□□□ -0.41
ATG13-204ENST00000525009 ZSCAN10Q96SZ4 725 aaPredicted RBP12.49□□□□□ -0.41
ATG13-204ENST00000525009 ZKSCAN3Q9BRR0 538 aa12.49□□□□□ -0.41
ATG13-204ENST00000525009 ZNF277Q9NRM2 450 aaPredicted RBP12.49□□□□□ -0.41
ATG13-204ENST00000525009 SERPINA10Q9UK55 444 aa12.49□□□□□ -0.41
ATG13-204ENST00000525009 HPS5Q9UPZ3 1129 aa12.49□□□□□ -0.41
ATG13-204ENST00000525009 ATP6V1DQ9Y5K8 247 aa12.49□□□□□ -0.41
ATG13-204ENST00000525009 MYH2Q9UKX2 1941 aa12.49□□□□□ -0.41
ATG13-204ENST00000525009 PTPDC1A2A3K4 754 aa12.48□□□□□ -0.41
ATG13-204ENST00000525009 SMIM22K7EJ46 135 aa12.48□□□□□ -0.41
ATG13-204ENST00000525009 JAK2O60674 1132 aa12.48□□□□□ -0.41
ATG13-204ENST00000525009 CTDNEP1O95476 244 aa12.48□□□□□ -0.41
ATG13-204ENST00000525009 METAP2P50579 478 aaKnown RBP eCLIP12.48□□□□□ -0.41
ATG13-204ENST00000525009 CCDC178Q5BJE1 867 aa12.48□□□□□ -0.41
ATG13-204ENST00000525009 FOXD4L5Q5VV16 416 aaPredicted RBP12.48□□□□□ -0.41
ATG13-204ENST00000525009 APOBEC3HQ6NTF7 200 aaKnown RBP12.48□□□□□ -0.41
ATG13-204ENST00000525009 CDC42EP5Q6NZY7 148 aa12.48□□□□□ -0.41
ATG13-204ENST00000525009 TTC6Q86TZ1 520 aa12.48□□□□□ -0.41
ATG13-204ENST00000525009 NIM1KQ8IY84 436 aa12.48□□□□□ -0.41
ATG13-204ENST00000525009 ZNF444Q8N0Y2 327 aaPredicted RBP12.48□□□□□ -0.41
ATG13-204ENST00000525009 FOXD4L4Q8WXT5 416 aaPredicted RBP12.48□□□□□ -0.41
ATG13-204ENST00000525009 TAOK3Q9H2K8 898 aa12.48□□□□□ -0.41
ATG13-204ENST00000525009 MKNK2Q9HBH9 465 aa12.48□□□□□ -0.41
ATG13-204ENST00000525009 NCOA5Q9HCD5 579 aaKnown RBP12.48□□□□□ -0.41
ATG13-204ENST00000525009 SAP30BPQ9UHR5 308 aaKnown RBP12.48□□□□□ -0.41
ATG13-204ENST00000525009 ZNRF3Q9ULT6 936 aa12.48□□□□□ -0.41
ATG13-204ENST00000525009 TNKSO95271 1327 aa12.47□□□□□ -0.41
ATG13-204ENST00000525009 TSPY2A6NKD2 308 aa12.47□□□□□ -0.41
ATG13-204ENST00000525009 GOLGA8AA7E2F4 631 aa12.47□□□□□ -0.41
ATG13-204ENST00000525009 PRDM1O75626 825 aa12.47□□□□□ -0.41
ATG13-204ENST00000525009 CDKL5O76039 1030 aa12.47□□□□□ -0.41
ATG13-204ENST00000525009 F13A1P00488 732 aa12.47□□□□□ -0.41
ATG13-204ENST00000525009 VIL1P09327 827 aaKnown RBP12.47□□□□□ -0.41
ATG13-204ENST00000525009 PLCD1P51178 756 aa12.47□□□□□ -0.41
ATG13-204ENST00000525009 RBM5P52756 815 aaKnown RBP eCLIP12.47□□□□□ -0.41
ATG13-204ENST00000525009 PPP2R5BQ15173 497 aa12.47□□□□□ -0.41
ATG13-204ENST00000525009 SEC23AQ15436 765 aa12.47□□□□□ -0.41
ATG13-204ENST00000525009 RSBN1LQ6PCB5 846 aaPredicted RBP12.47□□□□□ -0.41
ATG13-204ENST00000525009 DDX11Q96FC9 970 aa12.47□□□□□ -0.41
ATG13-204ENST00000525009 SENP2Q9HC62 589 aa12.47□□□□□ -0.41
ATG13-204ENST00000525009 RNF181Q9P0P0 153 aa12.47□□□□□ -0.41
ATG13-204ENST00000525009 HDAC9Q9UKV0 1011 aa12.47□□□□□ -0.41
ATG13-204ENST00000525009 MTMR6Q9Y217 621 aa12.47□□□□□ -0.41
ATG13-204ENST00000525009 CCDC196A0A1B0GTZ2 297 aa12.46□□□□□ -0.41
ATG13-204ENST00000525009 VPS37CA5D8V6 355 aaPredicted RBP12.46□□□□□ -0.41
ATG13-204ENST00000525009 WDHD1O75717 1129 aaPredicted RBP12.46□□□□□ -0.41
ATG13-204ENST00000525009 CALM1P0DP23 149 aa12.46□□□□□ -0.41
ATG13-204ENST00000525009 CALM2P0DP24 149 aa12.46□□□□□ -0.41
ATG13-204ENST00000525009 CALM3P0DP25 149 aa12.46□□□□□ -0.41
ATG13-204ENST00000525009 PICALMQ13492 652 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms