RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 CASTP20810 708 aaKnown RBP18.76■□□□□ 0.59
TSPAN4-213ENST00000524895 ADCK5Q3MIX3 580 aa18.76■□□□□ 0.59
TSPAN4-213ENST00000524895 SH3BP5LQ7L8J4 393 aa18.76■□□□□ 0.59
TSPAN4-213ENST00000524895 CRACR2BQ8N4Y2 399 aaPredicted RBP18.76■□□□□ 0.59
TSPAN4-213ENST00000524895 ZNF526Q8TF50 670 aaPredicted RBP18.76■□□□□ 0.59
TSPAN4-213ENST00000524895 DCPSQ96C86 337 aaKnown RBP18.76■□□□□ 0.59
TSPAN4-213ENST00000524895 DYNLL2Q96FJ2 89 aa18.76■□□□□ 0.59
TSPAN4-213ENST00000524895 NEK1Q96PY6 1258 aa18.76■□□□□ 0.59
TSPAN4-213ENST00000524895 KIF2CQ99661 725 aa18.76■□□□□ 0.59
TSPAN4-213ENST00000524895 TRIM34Q9BYJ4 488 aa18.76■□□□□ 0.59
TSPAN4-213ENST00000524895 EHD4Q9H223 541 aa18.76■□□□□ 0.59
TSPAN4-213ENST00000524895 CNNM2Q9H8M5 875 aa18.76■□□□□ 0.59
TSPAN4-213ENST00000524895 RRAGCQ9HB90 399 aa18.76■□□□□ 0.59
TSPAN4-213ENST00000524895 ZNF287Q9HBT7 754 aa18.76■□□□□ 0.59
TSPAN4-213ENST00000524895 PI4KBQ9UBF8 816 aa18.76■□□□□ 0.59
TSPAN4-213ENST00000524895 SERPINB13Q9UIV8 391 aa18.76■□□□□ 0.59
TSPAN4-213ENST00000524895 SCAF8Q9UPN6 1271 aaKnown RBP18.76■□□□□ 0.59
TSPAN4-213ENST00000524895 NEDD4P46934 1319 aa18.75■□□□□ 0.59
TSPAN4-213ENST00000524895 RABEP1Q15276 862 aa18.75■□□□□ 0.59
TSPAN4-213ENST00000524895 RRP12Q5JTH9 1297 aaKnown RBP18.75■□□□□ 0.59
TSPAN4-213ENST00000524895 NCOA7Q8NI08 942 aa18.75■□□□□ 0.59
TSPAN4-213ENST00000524895 ZC3H15Q8WU90 426 aaKnown RBP18.75■□□□□ 0.59
TSPAN4-213ENST00000524895 TM6SF1Q9BZW5 370 aa18.75■□□□□ 0.59
TSPAN4-213ENST00000524895 KRT23Q9C075 422 aa18.75■□□□□ 0.59
TSPAN4-213ENST00000524895 DEFB129Q9H1M3 183 aa18.75■□□□□ 0.59
TSPAN4-213ENST00000524895 PPP2R3BQ9Y5P8 575 aa18.75■□□□□ 0.59
TSPAN4-213ENST00000524895 HMGB1P09429 215 aaKnown RBP18.74■□□□□ 0.59
TSPAN4-213ENST00000524895 BLOC1S2Q6QNY1 142 aa18.74■□□□□ 0.59
TSPAN4-213ENST00000524895 C16orf86Q6ZW13 317 aa18.74■□□□□ 0.59
TSPAN4-213ENST00000524895 SULF1Q8IWU6 871 aa18.74■□□□□ 0.59
TSPAN4-213ENST00000524895 MKNK2Q9HBH9 465 aa18.74■□□□□ 0.59
TSPAN4-213ENST00000524895 SWAP70Q9UH65 585 aa18.74■□□□□ 0.59
TSPAN4-213ENST00000524895 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.74■□□□□ 0.59
TSPAN4-213ENST00000524895 SIPA1L1O43166 1804 aa18.74■□□□□ 0.59
TSPAN4-213ENST00000524895 PRDM1O75626 825 aa18.73■□□□□ 0.59
TSPAN4-213ENST00000524895 SLC44A5Q8NCS7 719 aa18.73■□□□□ 0.59
TSPAN4-213ENST00000524895 UPF3BQ9BZI7 483 aaKnown RBP18.73■□□□□ 0.59
TSPAN4-213ENST00000524895 NMRK2Q9NPI5 230 aa18.73■□□□□ 0.59
TSPAN4-213ENST00000524895 INCENPQ9NQS7 918 aa18.73■□□□□ 0.59
TSPAN4-213ENST00000524895 TAOK2Q9UL54 1235 aa18.73■□□□□ 0.59
TSPAN4-213ENST00000524895 CLEC11AQ9Y240 323 aa18.73■□□□□ 0.59
TSPAN4-213ENST00000524895 CYP46A1Q9Y6A2 500 aa18.73■□□□□ 0.59
TSPAN4-213ENST00000524895 TACC3Q9Y6A5 838 aa18.73■□□□□ 0.59
TSPAN4-213ENST00000524895 B4E1Z4 1266 aa18.72■□□□□ 0.59
TSPAN4-213ENST00000524895 ORC4O43929 436 aa18.72■□□□□ 0.59
TSPAN4-213ENST00000524895 FGRP09769 529 aa18.72■□□□□ 0.59
TSPAN4-213ENST00000524895 CDK8P49336 464 aa18.72■□□□□ 0.59
TSPAN4-213ENST00000524895 GABPAQ06546 454 aa18.72■□□□□ 0.59
TSPAN4-213ENST00000524895 FOXP4Q8IVH2 680 aaPredicted RBP18.72■□□□□ 0.59
TSPAN4-213ENST00000524895 CDAN1Q8IWY9 1227 aa18.72■□□□□ 0.59
TSPAN4-213ENST00000524895 ESR2Q92731 530 aa18.72■□□□□ 0.59
TSPAN4-213ENST00000524895 ZSWIM6Q9HCJ5 1215 aa18.72■□□□□ 0.59
TSPAN4-213ENST00000524895 HERC5Q9UII4 1024 aaKnown RBP18.72■□□□□ 0.59
TSPAN4-213ENST00000524895 RANBP6O60518 1105 aaKnown RBP18.71■□□□□ 0.59
TSPAN4-213ENST00000524895 KDM4AO75164 1064 aa18.71■□□□□ 0.59
TSPAN4-213ENST00000524895 CPA1P15085 419 aa18.71■□□□□ 0.59
TSPAN4-213ENST00000524895 RPS6KB1P23443 525 aa18.71■□□□□ 0.59
TSPAN4-213ENST00000524895 NT5C2P49902 561 aa18.71■□□□□ 0.59
TSPAN4-213ENST00000524895 NEK4P51957 841 aa18.71■□□□□ 0.59
TSPAN4-213ENST00000524895 RUFY3Q7L099 469 aa18.71■□□□□ 0.59
TSPAN4-213ENST00000524895 KRT26Q7Z3Y9 468 aa18.71■□□□□ 0.59
TSPAN4-213ENST00000524895 MB21D2Q8IYB1 491 aaPredicted RBP18.71■□□□□ 0.59
TSPAN4-213ENST00000524895 HOOK2Q96ED9 719 aa18.71■□□□□ 0.59
TSPAN4-213ENST00000524895 TEPSINQ96N21 525 aa18.71■□□□□ 0.59
TSPAN4-213ENST00000524895 PGAP2Q9UHJ9 254 aa18.71■□□□□ 0.59
TSPAN4-213ENST00000524895 FAM196BA6NMK8 535 aa18.7■□□□□ 0.58
TSPAN4-213ENST00000524895 ADM5C9JUS6 153 aa18.7■□□□□ 0.58
TSPAN4-213ENST00000524895 MCM5P33992 734 aa18.7■□□□□ 0.58
TSPAN4-213ENST00000524895 DHX32Q7L7V1 743 aaKnown RBP18.7■□□□□ 0.58
TSPAN4-213ENST00000524895 ZNF444Q8N0Y2 327 aaPredicted RBP18.7■□□□□ 0.58
TSPAN4-213ENST00000524895 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.7■□□□□ 0.582e-8■■■■■ 42.5
TSPAN4-213ENST00000524895 MYH8P13535 1937 aa18.69■□□□□ 0.58
TSPAN4-213ENST00000524895 TSPY2A6NKD2 308 aa18.69■□□□□ 0.58
TSPAN4-213ENST00000524895 PRC1O43663 620 aa18.69■□□□□ 0.58
TSPAN4-213ENST00000524895 ST18O60284 1047 aa18.69■□□□□ 0.58
TSPAN4-213ENST00000524895 RASA1P20936 1047 aa18.69■□□□□ 0.58
TSPAN4-213ENST00000524895 SHMT1P34896 483 aa18.69■□□□□ 0.58
TSPAN4-213ENST00000524895 METTL16Q86W50 562 aaKnown RBP18.69■□□□□ 0.58
TSPAN4-213ENST00000524895 DNAJC18Q9H819 358 aa18.69■□□□□ 0.58
TSPAN4-213ENST00000524895 PDRG1Q9NUG6 133 aa18.69■□□□□ 0.58
TSPAN4-213ENST00000524895 RBM19Q9Y4C8 960 aaKnown RBP18.69■□□□□ 0.58
TSPAN4-213ENST00000524895 POTEIP0CG38 1075 aa18.68■□□□□ 0.58
TSPAN4-213ENST00000524895 POTEJP0CG39 1038 aa18.68■□□□□ 0.58
TSPAN4-213ENST00000524895 TSPY3P0CV98 308 aa18.68■□□□□ 0.58
TSPAN4-213ENST00000524895 TSPY8P0CW00 308 aa18.68■□□□□ 0.58
TSPAN4-213ENST00000524895 SLURP2P0DP57 97 aa18.68■□□□□ 0.58
TSPAN4-213ENST00000524895 FGD1P98174 961 aa18.68■□□□□ 0.58
TSPAN4-213ENST00000524895 COL9A3Q14050 684 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-213ENST00000524895 FAM47AQ5JRC9 791 aa18.68■□□□□ 0.58
TSPAN4-213ENST00000524895 NBPF12Q5TAG4 269 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-213ENST00000524895 PRAMEF18Q5VWM3 479 aa18.68■□□□□ 0.58
TSPAN4-213ENST00000524895 DCAF15Q66K64 600 aa18.68■□□□□ 0.58
TSPAN4-213ENST00000524895 CYB5R4Q7L1T6 521 aa18.68■□□□□ 0.58
TSPAN4-213ENST00000524895 CHST3Q7LGC8 479 aa18.68■□□□□ 0.58
TSPAN4-213ENST00000524895 LDHDQ86WU2 507 aa18.68■□□□□ 0.58
TSPAN4-213ENST00000524895 IL27Q8NEV9 243 aa18.68■□□□□ 0.58
TSPAN4-213ENST00000524895 TCEANC2Q96MN5 208 aa18.68■□□□□ 0.58
TSPAN4-213ENST00000524895 WDR19Q8NEZ3 1342 aa18.68■□□□□ 0.58
TSPAN4-213ENST00000524895 TBC1D12O60347 775 aa18.67■□□□□ 0.58
TSPAN4-213ENST00000524895 ANP32AP39687 249 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms