RNA–Protein interactions for RNA: ENST00000524654.1

CTSB-207, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-207ENST00000524654 ZFYVE28Q9HCC9 887 aa13.34□□□□□ -0.27
CTSB-207ENST00000524654 PALD1Q9ULE6 856 aa13.34□□□□□ -0.27
CTSB-207ENST00000524654 CASP8AP2Q9UKL3 1982 aa13.33□□□□□ -0.28
CTSB-207ENST00000524654 A0A0G2JLL6 359 aaPredicted RBP13.33□□□□□ -0.28
CTSB-207ENST00000524654 TCRBV5S4A2TA0A5A2 114 aa13.33□□□□□ -0.28
CTSB-207ENST00000524654 CCDC85CA6NKD9 419 aa13.33□□□□□ -0.28
CTSB-207ENST00000524654 TLR2O60603 784 aa13.33□□□□□ -0.28
CTSB-207ENST00000524654 SP3Q02447 781 aa13.33□□□□□ -0.28
CTSB-207ENST00000524654 RRP1BQ14684 758 aaKnown RBP13.33□□□□□ -0.28
CTSB-207ENST00000524654 PRRT2Q7Z6L0 340 aaPredicted RBP13.33□□□□□ -0.28
CTSB-207ENST00000524654 FOXP4Q8IVH2 680 aaPredicted RBP13.33□□□□□ -0.28
CTSB-207ENST00000524654 CRBNQ96SW2 442 aa13.33□□□□□ -0.28
CTSB-207ENST00000524654 DNAJC18Q9H819 358 aa13.33□□□□□ -0.28
CTSB-207ENST00000524654 PAG1Q9NWQ8 432 aa13.33□□□□□ -0.28
CTSB-207ENST00000524654 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.33□□□□□ -0.28
CTSB-207ENST00000524654 DOCK2Q92608 1830 aa13.32□□□□□ -0.28
CTSB-207ENST00000524654 PDHXO00330 501 aa13.32□□□□□ -0.28
CTSB-207ENST00000524654 CAP2P40123 477 aa13.32□□□□□ -0.28
CTSB-207ENST00000524654 CAP1Q01518 475 aa13.32□□□□□ -0.28
CTSB-207ENST00000524654 GPAT2Q6NUI2 795 aa13.32□□□□□ -0.28
CTSB-207ENST00000524654 ERO1AQ96HE7 468 aa13.32□□□□□ -0.28
CTSB-207ENST00000524654 ECHDC1Q9NTX5 307 aa13.32□□□□□ -0.28
CTSB-207ENST00000524654 SAP30BPQ9UHR5 308 aaKnown RBP13.32□□□□□ -0.28
CTSB-207ENST00000524654 ZNF532Q9HCE3 1301 aa13.32□□□□□ -0.28
CTSB-207ENST00000524654 MAGEB6P1A0A0J9YX57 407 aa13.31□□□□□ -0.28
CTSB-207ENST00000524654 USP5P45974 858 aa13.31□□□□□ -0.28
CTSB-207ENST00000524654 FBXO46Q6PJ61 603 aaPredicted RBP13.31□□□□□ -0.28
CTSB-207ENST00000524654 FASTKD5Q7L8L6 764 aaKnown RBP13.31□□□□□ -0.28
CTSB-207ENST00000524654 OTOP1Q7RTM1 612 aa13.31□□□□□ -0.28
CTSB-207ENST00000524654 CCDC84Q86UT8 332 aaPredicted RBP13.31□□□□□ -0.28
CTSB-207ENST00000524654 CD99L2Q8TCZ2 262 aa13.31□□□□□ -0.28
CTSB-207ENST00000524654 HPS5Q9UPZ3 1129 aa13.31□□□□□ -0.28
CTSB-207ENST00000524654 ADGRA2Q96PE1 1338 aa13.31□□□□□ -0.28
CTSB-207ENST00000524654 TRIM75PA6NK02 468 aa13.3□□□□□ -0.28
CTSB-207ENST00000524654 HLA-DOAP06340 250 aa13.3□□□□□ -0.28
CTSB-207ENST00000524654 ADD2P35612 726 aa13.3□□□□□ -0.28
CTSB-207ENST00000524654 JAG1P78504 1218 aa13.3□□□□□ -0.28
CTSB-207ENST00000524654 C17orf99Q6UX52 265 aa13.3□□□□□ -0.28
CTSB-207ENST00000524654 CRACR2BQ8N4Y2 399 aaPredicted RBP13.3□□□□□ -0.28
CTSB-207ENST00000524654 EHD4Q9H223 541 aa13.3□□□□□ -0.28
CTSB-207ENST00000524654 TRIM17Q9Y577 477 aa13.3□□□□□ -0.28
CTSB-207ENST00000524654 UBE3CQ15386 1083 aa13.29□□□□□ -0.28
CTSB-207ENST00000524654 SLFNL1Q499Z3 407 aa13.29□□□□□ -0.28
CTSB-207ENST00000524654 TATDN1Q6P1N9 297 aa13.29□□□□□ -0.28
CTSB-207ENST00000524654 LCORLQ8N3X6 602 aa13.29□□□□□ -0.28
CTSB-207ENST00000524654 ZNF280CQ8ND82 737 aa13.29□□□□□ -0.28
CTSB-207ENST00000524654 TBC1D2Q9BYX2 928 aa13.29□□□□□ -0.28
CTSB-207ENST00000524654 CRNKL1Q9BZJ0 848 aaKnown RBP13.29□□□□□ -0.28
CTSB-207ENST00000524654 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.29□□□□□ -0.281e-6■□□□□ 10.8
CTSB-207ENST00000524654 SLC45A1Q9Y2W3 748 aa13.29□□□□□ -0.28
CTSB-207ENST00000524654 USP17L5A8MUK1 530 aa13.28□□□□□ -0.28
CTSB-207ENST00000524654 CHGBP05060 677 aa13.28□□□□□ -0.28
CTSB-207ENST00000524654 ASNSP08243 561 aa13.28□□□□□ -0.28
CTSB-207ENST00000524654 CYP2C8P10632 490 aa13.28□□□□□ -0.28
CTSB-207ENST00000524654 RGS19P49795 217 aa13.28□□□□□ -0.28
CTSB-207ENST00000524654 SPP2Q13103 211 aa13.28□□□□□ -0.28
CTSB-207ENST00000524654 HDAC1Q13547 482 aaPredicted RBP13.28□□□□□ -0.28
CTSB-207ENST00000524654 AAMPQ13685 434 aa13.28□□□□□ -0.28
CTSB-207ENST00000524654 SHROOM1Q2M3G4 852 aaPredicted RBP13.28□□□□□ -0.28
CTSB-207ENST00000524654 SLC4A8Q2Y0W8 1093 aa13.28□□□□□ -0.28
CTSB-207ENST00000524654 TSHZ3Q63HK5 1081 aa13.28□□□□□ -0.28
CTSB-207ENST00000524654 TTC6Q86TZ1 520 aa13.28□□□□□ -0.28
CTSB-207ENST00000524654 GPATCH3Q96I76 525 aa13.28□□□□□ -0.28
CTSB-207ENST00000524654 PARK7Q99497 189 aaKnown RBP13.28□□□□□ -0.28
CTSB-207ENST00000524654 WDR18Q9BV38 432 aa13.28□□□□□ -0.28
CTSB-207ENST00000524654 TRIM34Q9BYJ4 488 aa13.28□□□□□ -0.28
CTSB-207ENST00000524654 EFCC1Q9HA90 598 aa13.28□□□□□ -0.28
CTSB-207ENST00000524654 GINM1Q9NU53 330 aa13.28□□□□□ -0.28
CTSB-207ENST00000524654 SERPINB13Q9UIV8 391 aa13.28□□□□□ -0.28
CTSB-207ENST00000524654 PTPN22Q9Y2R2 807 aa13.28□□□□□ -0.28
CTSB-207ENST00000524654 SIPA1L1O43166 1804 aa13.27□□□□□ -0.28
CTSB-207ENST00000524654 PLCD1P51178 756 aa13.27□□□□□ -0.29
CTSB-207ENST00000524654 LACTBP83111 547 aaPredicted RBP13.27□□□□□ -0.29
CTSB-207ENST00000524654 SH3D19Q5HYK7 790 aa13.27□□□□□ -0.29
CTSB-207ENST00000524654 GADL1Q6ZQY3 521 aa13.27□□□□□ -0.29
CTSB-207ENST00000524654 PROCA1Q8NCQ7 364 aaPredicted RBP13.27□□□□□ -0.29
CTSB-207ENST00000524654 SDR42E1Q8WUS8 393 aa13.27□□□□□ -0.29
CTSB-207ENST00000524654 ARMT1Q9H993 441 aa13.27□□□□□ -0.29
CTSB-207ENST00000524654 AS3MTQ9HBK9 375 aa13.27□□□□□ -0.29
CTSB-207ENST00000524654 DCP1AQ9NPI6 582 aaPredicted RBP13.27□□□□□ -0.29
CTSB-207ENST00000524654 CPA4Q9UI42 421 aa13.27□□□□□ -0.29
CTSB-207ENST00000524654 AGTPBP1Q9UPW5 1226 aa13.27□□□□□ -0.29
CTSB-207ENST00000524654 TTC41PQ6P2S7 1318 aa13.27□□□□□ -0.29
CTSB-207ENST00000524654 MYO5AQ9Y4I1 1855 aaKnown RBP13.27□□□□□ -0.29
CTSB-207ENST00000524654 MBD4O95243 580 aa13.26□□□□□ -0.29
CTSB-207ENST00000524654 GDF11O95390 407 aa13.26□□□□□ -0.29
CTSB-207ENST00000524654 BCRP11274 1271 aa13.26□□□□□ -0.29
CTSB-207ENST00000524654 HTTP42858 3142 aa13.26□□□□□ -0.29
CTSB-207ENST00000524654 GABPAQ06546 454 aa13.26□□□□□ -0.29
CTSB-207ENST00000524654 DOCK1Q14185 1865 aa13.26□□□□□ -0.29
CTSB-207ENST00000524654 ARHGEF6Q15052 776 aa13.26□□□□□ -0.29
CTSB-207ENST00000524654 TREML2Q5T2D2 321 aa13.26□□□□□ -0.29
CTSB-207ENST00000524654 ZSCAN25Q6NSZ9 544 aa13.26□□□□□ -0.29
CTSB-207ENST00000524654 KBTBD3Q8NAB2 608 aa13.26□□□□□ -0.29
CTSB-207ENST00000524654 PI4K2BQ8TCG2 481 aa13.26□□□□□ -0.29
CTSB-207ENST00000524654 OTUD7AQ8TE49 926 aaPredicted RBP13.26□□□□□ -0.29
CTSB-207ENST00000524654 ARHGAP39Q9C0H5 1083 aa13.26□□□□□ -0.29
CTSB-207ENST00000524654 MCM9Q9NXL9 1143 aa13.26□□□□□ -0.29
CTSB-207ENST00000524654 ZBTB21Q9ULJ3 1066 aa13.26□□□□□ -0.29
CTSB-207ENST00000524654 FOCADQ5VW36 1801 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms