RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 ARMT1Q9H993 441 aa10.27□□□□□ -0.77
PKP3-202ENST00000524646 HOOK1Q9UJC3 728 aaKnown RBP10.27□□□□□ -0.77
PKP3-202ENST00000524646 MORC2Q9Y6X9 1032 aaPredicted RBP10.27□□□□□ -0.77
PKP3-202ENST00000524646 CDK5RAP2Q96SN8 1893 aa10.27□□□□□ -0.77
PKP3-202ENST00000524646 PHLPP2Q6ZVD8 1323 aa10.27□□□□□ -0.77
PKP3-202ENST00000524646 ZNF335Q9H4Z2 1342 aaPredicted RBP10.27□□□□□ -0.77
PKP3-202ENST00000524646 GSG1L2A8MUP6 293 aa10.26□□□□□ -0.77
PKP3-202ENST00000524646 SLU7O95391 586 aaKnown RBP10.26□□□□□ -0.77
PKP3-202ENST00000524646 DEXIO95424 95 aa10.26□□□□□ -0.77
PKP3-202ENST00000524646 WTAPQ15007 396 aa10.26□□□□□ -0.77
PKP3-202ENST00000524646 PARP10Q53GL7 1025 aa10.26□□□□□ -0.77
PKP3-202ENST00000524646 MFSD6Q6ZSS7 791 aa10.26□□□□□ -0.77
PKP3-202ENST00000524646 VSTM4Q8IW00 320 aa10.26□□□□□ -0.77
PKP3-202ENST00000524646 DIS3L2Q8IYB7 885 aaKnown RBP10.26□□□□□ -0.77
PKP3-202ENST00000524646 LCORLQ8N3X6 602 aa10.26□□□□□ -0.77
PKP3-202ENST00000524646 FOXP1Q9H334 677 aaPredicted RBP10.26□□□□□ -0.77
PKP3-202ENST00000524646 RNF41Q9H4P4 317 aaPredicted RBP10.26□□□□□ -0.77
PKP3-202ENST00000524646 L2HGDHQ9H9P8 463 aa10.26□□□□□ -0.77
PKP3-202ENST00000524646 PRDM10Q9NQV6 1147 aa10.26□□□□□ -0.77
PKP3-202ENST00000524646 TRMT1Q9NXH9 659 aaKnown RBP10.26□□□□□ -0.77
PKP3-202ENST00000524646 BTG4Q9NY30 223 aa10.26□□□□□ -0.77
PKP3-202ENST00000524646 DACH1Q9UI36 760 aa10.26□□□□□ -0.77
PKP3-202ENST00000524646 FBXO2Q9UK22 296 aaPredicted RBP10.26□□□□□ -0.77
PKP3-202ENST00000524646 ZNF215Q9UL58 517 aaPredicted RBP10.26□□□□□ -0.77
PKP3-202ENST00000524646 KCNH3Q9ULD8 1083 aa10.26□□□□□ -0.77
PKP3-202ENST00000524646 TACC3Q9Y6A5 838 aa10.26□□□□□ -0.77
PKP3-202ENST00000524646 CCDC196A0A1B0GTZ2 297 aa10.25□□□□□ -0.77
PKP3-202ENST00000524646 ATP1A3P13637 1013 aa10.25□□□□□ -0.77
PKP3-202ENST00000524646 PTPREP23469 700 aa10.25□□□□□ -0.77
PKP3-202ENST00000524646 EIF5P55010 431 aaKnown RBP10.25□□□□□ -0.77
PKP3-202ENST00000524646 CBX1P83916 185 aa10.25□□□□□ -0.77
PKP3-202ENST00000524646 CCDC152Q4G0S7 254 aa10.25□□□□□ -0.77
PKP3-202ENST00000524646 RILPL1Q5EBL4 403 aa10.25□□□□□ -0.77
PKP3-202ENST00000524646 ZNF654Q8IZM8 581 aa10.25□□□□□ -0.77
PKP3-202ENST00000524646 STK11IPQ8N1F8 1099 aa10.25□□□□□ -0.77
PKP3-202ENST00000524646 TRIML1Q8N9V2 468 aa10.25□□□□□ -0.77
PKP3-202ENST00000524646 CNNM3Q8NE01 707 aa10.25□□□□□ -0.77
PKP3-202ENST00000524646 HELBQ8NG08 1087 aaPredicted RBP10.25□□□□□ -0.77
PKP3-202ENST00000524646 CLIC6Q96NY7 704 aa10.25□□□□□ -0.77
PKP3-202ENST00000524646 MPHOSPH8Q99549 860 aa10.25□□□□□ -0.77
PKP3-202ENST00000524646 UTP14AQ9BVJ6 771 aaKnown RBP10.25□□□□□ -0.77
PKP3-202ENST00000524646 CCDC87Q9NVE4 849 aa10.25□□□□□ -0.77
PKP3-202ENST00000524646 OGFRQ9NZT2 677 aa10.25□□□□□ -0.77
PKP3-202ENST00000524646 ZSWIM5Q9P217 1185 aa10.25□□□□□ -0.77
PKP3-202ENST00000524646 CEP131Q9UPN4 1083 aa10.25□□□□□ -0.77
PKP3-202ENST00000524646 SLC4A4Q9Y6R1 1079 aa10.25□□□□□ -0.77
PKP3-202ENST00000524646 DDX60LQ5H9U9 1706 aaKnown RBP10.24□□□□□ -0.77
PKP3-202ENST00000524646 ERICH2A1L162 156 aa10.24□□□□□ -0.77
PKP3-202ENST00000524646 NTSR2O95665 410 aa10.24□□□□□ -0.77
PKP3-202ENST00000524646 SERPINC1P01008 464 aa10.24□□□□□ -0.77
PKP3-202ENST00000524646 IGHMBP2P38935 993 aaKnown RBP10.24□□□□□ -0.77
PKP3-202ENST00000524646 UBASH3AP57075 661 aa10.24□□□□□ -0.77
PKP3-202ENST00000524646 POSTNQ15063 836 aa10.24□□□□□ -0.77
PKP3-202ENST00000524646 CFAP100Q494V2 611 aa10.24□□□□□ -0.77
PKP3-202ENST00000524646 SUSD4Q5VX71 490 aa10.24□□□□□ -0.77
PKP3-202ENST00000524646 ZNF579Q8NAF0 562 aaKnown RBP10.24□□□□□ -0.77
PKP3-202ENST00000524646 DPF2Q92785 391 aa10.24□□□□□ -0.77
PKP3-202ENST00000524646 GTPBP4Q9BZE4 634 aaKnown RBP10.24□□□□□ -0.77
PKP3-202ENST00000524646 MAN1B1Q9UKM7 699 aa10.24□□□□□ -0.77
PKP3-202ENST00000524646 ZNF804BA4D1E1 1349 aa10.24□□□□□ -0.77
PKP3-202ENST00000524646 TNRC6CQ9HCJ0 1690 aaKnown RBP10.23□□□□□ -0.77
PKP3-202ENST00000524646 UBE2Q2LH0YL09 131 aa10.23□□□□□ -0.77
PKP3-202ENST00000524646 PRKAB2O43741 272 aa10.23□□□□□ -0.77
PKP3-202ENST00000524646 CAMTA2O94983 1202 aa10.23□□□□□ -0.77
PKP3-202ENST00000524646 TOP1P11387 765 aaKnown RBP10.23□□□□□ -0.77
PKP3-202ENST00000524646 ZSCAN20P17040 1043 aaPredicted RBP10.23□□□□□ -0.77
PKP3-202ENST00000524646 GUCY1A2P33402 732 aa10.23□□□□□ -0.77
PKP3-202ENST00000524646 TOB1P50616 345 aaPredicted RBP10.23□□□□□ -0.77
PKP3-202ENST00000524646 PPARAQ07869 468 aa10.23□□□□□ -0.77
PKP3-202ENST00000524646 NAA30Q147X3 362 aaPredicted RBP10.23□□□□□ -0.77
PKP3-202ENST00000524646 ELF2Q15723 593 aa10.23□□□□□ -0.77
PKP3-202ENST00000524646 LONRF3Q496Y0 759 aa10.23□□□□□ -0.77
PKP3-202ENST00000524646 RRP12Q5JTH9 1297 aaKnown RBP10.23□□□□□ -0.77
PKP3-202ENST00000524646 NT5DC1Q5TFE4 455 aa10.23□□□□□ -0.77
PKP3-202ENST00000524646 TMTC2Q8N394 836 aa10.23□□□□□ -0.77
PKP3-202ENST00000524646 CDC5LQ99459 802 aaKnown RBP10.23□□□□□ -0.77
PKP3-202ENST00000524646 UBAC1Q9BSL1 405 aa10.23□□□□□ -0.77
PKP3-202ENST00000524646 RNF26Q9BY78 433 aaPredicted RBP10.23□□□□□ -0.77
PKP3-202ENST00000524646 TOMM22Q9NS69 142 aa10.23□□□□□ -0.77
PKP3-202ENST00000524646 DDX41Q9UJV9 622 aaKnown RBP10.23□□□□□ -0.77
PKP3-202ENST00000524646 ANAPC4Q9UJX5 808 aa10.23□□□□□ -0.77
PKP3-202ENST00000524646 PRDM4Q9UKN5 801 aa10.23□□□□□ -0.77
PKP3-202ENST00000524646 PCDHA5Q9Y5H7 936 aa10.23□□□□□ -0.77
PKP3-202ENST00000524646 TAF1LQ8IZX4 1826 aa10.22□□□□□ -0.77
PKP3-202ENST00000524646 GOLGA6L9A6NEM1 432 aa10.22□□□□□ -0.77
PKP3-202ENST00000524646 SPDYE4A6NLX3 237 aa10.22□□□□□ -0.77
PKP3-202ENST00000524646 BTBD18B2RXH4 712 aa10.22□□□□□ -0.77
PKP3-202ENST00000524646 TMEM232C9JQI7 657 aa10.22□□□□□ -0.77
PKP3-202ENST00000524646 ACTN4O43707 911 aaKnown RBP10.22□□□□□ -0.77
PKP3-202ENST00000524646 BMP15O95972 392 aa10.22□□□□□ -0.77
PKP3-202ENST00000524646 PRR29P0C7W0 189 aa10.22□□□□□ -0.77
PKP3-202ENST00000524646 PLCD1P51178 756 aa10.22□□□□□ -0.77
PKP3-202ENST00000524646 ETF1P62495 437 aaKnown RBP10.22□□□□□ -0.77
PKP3-202ENST00000524646 MDM2Q00987 491 aaPredicted RBP10.22□□□□□ -0.77
PKP3-202ENST00000524646 GABPB1Q06547 395 aaPredicted RBP10.22□□□□□ -0.77
PKP3-202ENST00000524646 PDE4BQ07343 736 aa10.22□□□□□ -0.77
PKP3-202ENST00000524646 MORC3Q14149 939 aa10.22□□□□□ -0.77
PKP3-202ENST00000524646 PPP2R5BQ15173 497 aa10.22□□□□□ -0.77
PKP3-202ENST00000524646 SEC23AQ15436 765 aa10.22□□□□□ -0.77
PKP3-202ENST00000524646 ISM2Q6H9L7 571 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms