RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 ZNF215Q9UL58 517 aaPredicted RBP9.55□□□□□ -0.88
CHD7-202ENST00000524602 KCNH3Q9ULD8 1083 aa9.55□□□□□ -0.88
CHD7-202ENST00000524602 IFIT3O14879 490 aaKnown RBP9.55□□□□□ -0.88
CHD7-202ENST00000524602 MMP1P03956 469 aa9.55□□□□□ -0.88
CHD7-202ENST00000524602 UBASH3AP57075 661 aa9.55□□□□□ -0.88
CHD7-202ENST00000524602 RILPL1Q5EBL4 403 aa9.55□□□□□ -0.88
CHD7-202ENST00000524602 SYNE4Q8N205 404 aa9.55□□□□□ -0.88
CHD7-202ENST00000524602 TMX1Q9H3N1 280 aa9.55□□□□□ -0.88
CHD7-202ENST00000524602 PHLPP2Q6ZVD8 1323 aa9.55□□□□□ -0.88
CHD7-202ENST00000524602 LMOD1P29536 600 aaPredicted RBP9.55□□□□□ -0.88
CHD7-202ENST00000524602 NT5DC1Q5TFE4 455 aa9.55□□□□□ -0.88
CHD7-202ENST00000524602 KANK3Q6NY19 840 aa9.55□□□□□ -0.88
CHD7-202ENST00000524602 MFSD6Q6ZSS7 791 aa9.55□□□□□ -0.88
CHD7-202ENST00000524602 TRIML1Q8N9V2 468 aa9.55□□□□□ -0.88
CHD7-202ENST00000524602 CNNM3Q8NE01 707 aa9.55□□□□□ -0.88
CHD7-202ENST00000524602 RNF41Q9H4P4 317 aaPredicted RBP9.55□□□□□ -0.88
CHD7-202ENST00000524602 ZSWIM5Q9P217 1185 aa9.55□□□□□ -0.88
CHD7-202ENST00000524602 CEP131Q9UPN4 1083 aa9.55□□□□□ -0.88
CHD7-202ENST00000524602 RTL9Q8NET4 1388 aa9.55□□□□□ -0.88
CHD7-202ENST00000524602 SERPINC1P01008 464 aa9.54□□□□□ -0.88
CHD7-202ENST00000524602 DDB1Q16531 1140 aa9.54□□□□□ -0.88
CHD7-202ENST00000524602 CT47A1Q5JQC4 288 aaPredicted RBP9.54□□□□□ -0.88
CHD7-202ENST00000524602 METTL16Q86W50 562 aaKnown RBP9.54□□□□□ -0.88
CHD7-202ENST00000524602 VSTM4Q8IW00 320 aa9.54□□□□□ -0.88
CHD7-202ENST00000524602 SLC26A6Q9BXS9 759 aa9.54□□□□□ -0.88
CHD7-202ENST00000524602 EPB41L4AQ9HCS5 686 aaPredicted RBP9.54□□□□□ -0.88
CHD7-202ENST00000524602 DENND2AQ9ULE3 1009 aa9.54□□□□□ -0.88
CHD7-202ENST00000524602 GOLGB1Q14789 3259 aaKnown RBP9.54□□□□□ -0.88
CHD7-202ENST00000524602 MBD4O95243 580 aa9.54□□□□□ -0.88
CHD7-202ENST00000524602 DEXIO95424 95 aa9.54□□□□□ -0.88
CHD7-202ENST00000524602 PNOCQ13519 176 aa9.54□□□□□ -0.88
CHD7-202ENST00000524602 CCDC93Q567U6 631 aa9.54□□□□□ -0.88
CHD7-202ENST00000524602 MAGEB6Q8N7X4 407 aa9.54□□□□□ -0.88
CHD7-202ENST00000524602 SRRTQ9BXP5 876 aaKnown RBP9.54□□□□□ -0.88
CHD7-202ENST00000524602 A0A0G2JS52 829 aa9.54□□□□□ -0.88
CHD7-202ENST00000524602 ERICH2A1L162 156 aa9.54□□□□□ -0.88
CHD7-202ENST00000524602 MDM2Q00987 491 aaPredicted RBP9.54□□□□□ -0.88
CHD7-202ENST00000524602 GABPB1Q06547 395 aaPredicted RBP9.54□□□□□ -0.88
CHD7-202ENST00000524602 DZIP3Q86Y13 1208 aaKnown RBP9.54□□□□□ -0.88
CHD7-202ENST00000524602 MLKLQ8NB16 471 aa9.54□□□□□ -0.88
CHD7-202ENST00000524602 SENP2Q9HC62 589 aa9.54□□□□□ -0.88
CHD7-202ENST00000524602 ZBTB1Q9Y2K1 713 aa9.54□□□□□ -0.88
CHD7-202ENST00000524602 THRAP3Q9Y2W1 955 aaKnown RBP9.54□□□□□ -0.88
CHD7-202ENST00000524602 CICQ96RK0 1608 aaPredicted RBP9.53□□□□□ -0.88
CHD7-202ENST00000524602 GOLGA6L9A6NEM1 432 aa9.53□□□□□ -0.88
CHD7-202ENST00000524602 GSG1L2A8MUP6 293 aa9.53□□□□□ -0.88
CHD7-202ENST00000524602 ZSCAN12O43309 604 aa9.53□□□□□ -0.88
CHD7-202ENST00000524602 TOM1O60784 492 aa9.53□□□□□ -0.88
CHD7-202ENST00000524602 KIF20AO95235 890 aa9.53□□□□□ -0.88
CHD7-202ENST00000524602 RXRAP19793 462 aa9.53□□□□□ -0.88
CHD7-202ENST00000524602 PTPREP23469 700 aa9.53□□□□□ -0.88
CHD7-202ENST00000524602 RASGRF1Q13972 1273 aa9.53□□□□□ -0.88
CHD7-202ENST00000524602 RTN1Q16799 776 aa9.53□□□□□ -0.88
CHD7-202ENST00000524602 LONRF3Q496Y0 759 aa9.53□□□□□ -0.88
CHD7-202ENST00000524602 CCDC34Q96HJ3 373 aa9.53□□□□□ -0.88
CHD7-202ENST00000524602 CDCA7Q9BWT1 371 aaPredicted RBP9.53□□□□□ -0.88
CHD7-202ENST00000524602 RREB1Q92766 1687 aa9.53□□□□□ -0.88
CHD7-202ENST00000524602 SPATA31A5Q5VU36 1347 aa9.53□□□□□ -0.88
CHD7-202ENST00000524602 SPATA31A7Q8IWB4 1347 aa9.53□□□□□ -0.88
CHD7-202ENST00000524602 TOP1P11387 765 aaKnown RBP9.53□□□□□ -0.88
CHD7-202ENST00000524602 ETF1P62495 437 aaKnown RBP9.53□□□□□ -0.88
CHD7-202ENST00000524602 WTAPQ15007 396 aa9.53□□□□□ -0.88
CHD7-202ENST00000524602 CFAP100Q494V2 611 aa9.53□□□□□ -0.88
CHD7-202ENST00000524602 NKX2-3Q8TAU0 364 aa9.53□□□□□ -0.88
CHD7-202ENST00000524602 ACSBG1Q96GR2 724 aa9.53□□□□□ -0.88
CHD7-202ENST00000524602 ATP1A3P13637 1013 aa9.52□□□□□ -0.88
CHD7-202ENST00000524602 DIS3L2Q8IYB7 885 aaKnown RBP9.52□□□□□ -0.88
CHD7-202ENST00000524602 MARCH10Q8NA82 808 aaPredicted RBP9.52□□□□□ -0.88
CHD7-202ENST00000524602 CLIC6Q96NY7 704 aa9.52□□□□□ -0.88
CHD7-202ENST00000524602 MPHOSPH8Q99549 860 aa9.52□□□□□ -0.88
CHD7-202ENST00000524602 FBXO2Q9UK22 296 aaPredicted RBP9.52□□□□□ -0.88
CHD7-202ENST00000524602 PCDHA5Q9Y5H7 936 aa9.52□□□□□ -0.88
CHD7-202ENST00000524602 SLIT2O94813 1529 aa9.52□□□□□ -0.88
CHD7-202ENST00000524602 MYH6P13533 1939 aa9.52□□□□□ -0.88
CHD7-202ENST00000524602 ARHGAP6O43182 974 aa9.52□□□□□ -0.89
CHD7-202ENST00000524602 CTDSPL2Q05D32 466 aa9.52□□□□□ -0.89
CHD7-202ENST00000524602 POSTNQ15063 836 aa9.52□□□□□ -0.89
CHD7-202ENST00000524602 STK11IPQ8N1F8 1099 aa9.52□□□□□ -0.89
CHD7-202ENST00000524602 TDO2P48775 406 aa9.52□□□□□ -0.89
CHD7-202ENST00000524602 SARSP49591 514 aaKnown RBP9.52□□□□□ -0.89
CHD7-202ENST00000524602 FAM193AP78312 1265 aa9.52□□□□□ -0.89
CHD7-202ENST00000524602 KMT5BQ4FZB7 885 aa9.52□□□□□ -0.89
CHD7-202ENST00000524602 PARP10Q53GL7 1025 aa9.52□□□□□ -0.89
CHD7-202ENST00000524602 SYT10Q6XYQ8 523 aa9.52□□□□□ -0.89
CHD7-202ENST00000524602 CRACR2BQ8N4Y2 399 aaPredicted RBP9.52□□□□□ -0.89
CHD7-202ENST00000524602 ENOX1Q8TC92 643 aaKnown RBP9.52□□□□□ -0.89
CHD7-202ENST00000524602 ARMT1Q9H993 441 aa9.52□□□□□ -0.89
CHD7-202ENST00000524602 FAM53CQ9NYF3 392 aa9.52□□□□□ -0.89
CHD7-202ENST00000524602 ANAPC4Q9UJX5 808 aa9.52□□□□□ -0.89
CHD7-202ENST00000524602 SRPRBQ9Y5M8 271 aaKnown RBP9.52□□□□□ -0.89
CHD7-202ENST00000524602 XBP1P17861 261 aa9.51□□□□□ -0.89
CHD7-202ENST00000524602 TOB1P50616 345 aaPredicted RBP9.51□□□□□ -0.89
CHD7-202ENST00000524602 NAA30Q147X3 362 aaPredicted RBP9.51□□□□□ -0.89
CHD7-202ENST00000524602 KRT222Q8N1A0 295 aa9.51□□□□□ -0.89
CHD7-202ENST00000524602 MYL10Q9BUA6 226 aa9.51□□□□□ -0.89
CHD7-202ENST00000524602 RNF26Q9BY78 433 aaPredicted RBP9.51□□□□□ -0.89
CHD7-202ENST00000524602 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.51□□□□□ -0.891e-6■■■□□ 18
CHD7-202ENST00000524602 DLEC1Q9Y238 1755 aa9.51□□□□□ -0.89
CHD7-202ENST00000524602 BTBD18B2RXH4 712 aa9.51□□□□□ -0.89
CHD7-202ENST00000524602 BMP15O95972 392 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms