RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	RGS3	P49796	1198 aa		13.49	□□□□□ -0.25
SORBS3-222	ENST00000524057	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.49	□□□□□ -0.25
SORBS3-222	ENST00000524057	SUCLG2	Q96I99	432 aa		13.49	□□□□□ -0.25
SORBS3-222	ENST00000524057	IDI2	Q9BXS1	227 aa		13.49	□□□□□ -0.25
SORBS3-222	ENST00000524057	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.49	□□□□□ -0.25
SORBS3-222	ENST00000524057	DDTL	A6NHG4	134 aa	Predicted RBP	13.48	□□□□□ -0.25
SORBS3-222	ENST00000524057	FOSL2	P15408	326 aa		13.48	□□□□□ -0.25
SORBS3-222	ENST00000524057	PRDX5	P30044	214 aa		13.48	□□□□□ -0.25
SORBS3-222	ENST00000524057	SPP2	Q13103	211 aa		13.48	□□□□□ -0.25
SORBS3-222	ENST00000524057	TJAP1	Q5JTD0	557 aa		13.48	□□□□□ -0.25
SORBS3-222	ENST00000524057	C9orf50	Q5SZB4	431 aa		13.48	□□□□□ -0.25
SORBS3-222	ENST00000524057	NUDT12	Q9BQG2	462 aa		13.48	□□□□□ -0.25
SORBS3-222	ENST00000524057	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.48	□□□□□ -0.25
SORBS3-222	ENST00000524057	PEX10	O60683	326 aa		13.47	□□□□□ -0.25
SORBS3-222	ENST00000524057	FGFR2	P21802	821 aa		13.47	□□□□□ -0.25
SORBS3-222	ENST00000524057	RARS	P54136	660 aa	Known RBP	13.47	□□□□□ -0.25
SORBS3-222	ENST00000524057	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.47	□□□□□ -0.25
SORBS3-222	ENST00000524057	FAM122A	Q96E09	287 aa		13.47	□□□□□ -0.25
SORBS3-222	ENST00000524057	MORF4L1	Q9UBU8	362 aa		13.47	□□□□□ -0.25
SORBS3-222	ENST00000524057	TNN	Q9UQP3	1299 aa		13.47	□□□□□ -0.25
SORBS3-222	ENST00000524057	PLXNB2	O15031	1838 aa		13.46	□□□□□ -0.25
SORBS3-222	ENST00000524057	ZBED9	Q6R2W3	1325 aa		13.46	□□□□□ -0.25
SORBS3-222	ENST00000524057	IFIT1	P09914	478 aa	Known RBP	13.46	□□□□□ -0.25
SORBS3-222	ENST00000524057	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.46	□□□□□ -0.25
SORBS3-222	ENST00000524057	ATN1	P54259	1190 aa	Predicted RBP	13.46	□□□□□ -0.25
SORBS3-222	ENST00000524057	HMGCS2	P54868	508 aa		13.46	□□□□□ -0.25
SORBS3-222	ENST00000524057	SMAD3	P84022	425 aa	Known RBP	13.46	□□□□□ -0.25
SORBS3-222	ENST00000524057	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.46	□□□□□ -0.25
SORBS3-222	ENST00000524057	CCL14	Q16627	93 aa		13.46	□□□□□ -0.25
SORBS3-222	ENST00000524057	TRMT44	Q8IYL2	757 aa	Known RBP	13.46	□□□□□ -0.25
SORBS3-222	ENST00000524057	USP6NL	Q92738	828 aa		13.46	□□□□□ -0.25
SORBS3-222	ENST00000524057	PRKAG2	Q9UGJ0	569 aa		13.46	□□□□□ -0.25
SORBS3-222	ENST00000524057	PTPRF	P10586	1907 aa		13.46	□□□□□ -0.25
SORBS3-222	ENST00000524057	PHIP	Q8WWQ0	1821 aa		13.46	□□□□□ -0.26
SORBS3-222	ENST00000524057	KIF16B	Q96L93	1317 aa		13.45	□□□□□ -0.26
SORBS3-222	ENST00000524057	ALDH1L1	O75891	902 aa		13.45	□□□□□ -0.26
SORBS3-222	ENST00000524057	LDHB	P07195	334 aa	Known RBP	13.45	□□□□□ -0.26
SORBS3-222	ENST00000524057	ALDH1L2	Q3SY69	923 aa		13.45	□□□□□ -0.26
SORBS3-222	ENST00000524057	USP38	Q8NB14	1042 aa		13.45	□□□□□ -0.26
SORBS3-222	ENST00000524057	ZNF280C	Q8ND82	737 aa		13.45	□□□□□ -0.26
SORBS3-222	ENST00000524057	KLHDC4	Q8TBB5	520 aa		13.45	□□□□□ -0.26
SORBS3-222	ENST00000524057	P2RX7	Q99572	595 aa	Known RBP	13.45	□□□□□ -0.26
SORBS3-222	ENST00000524057	DDX4	Q9NQI0	724 aa	Known RBP	13.45	□□□□□ -0.26
SORBS3-222	ENST00000524057	TBC1D12	O60347	775 aa		13.44	□□□□□ -0.26
SORBS3-222	ENST00000524057	BCAR3	O75815	825 aa		13.44	□□□□□ -0.26
SORBS3-222	ENST00000524057	ZKSCAN1	P17029	563 aa	Predicted RBP	13.44	□□□□□ -0.26
SORBS3-222	ENST00000524057	PUM3	Q15397	648 aa	Known RBP	13.44	□□□□□ -0.26
SORBS3-222	ENST00000524057		Q3C1V9	767 aa		13.44	□□□□□ -0.26
SORBS3-222	ENST00000524057	RABL6	Q3YEC7	729 aa	Predicted RBP	13.44	□□□□□ -0.26
SORBS3-222	ENST00000524057	GPRC5A	Q8NFJ5	357 aa		13.44	□□□□□ -0.26
SORBS3-222	ENST00000524057	BICC1	Q9H694	974 aa	Known RBP	13.44	□□□□□ -0.26
SORBS3-222	ENST00000524057	TXNRD2	Q9NNW7	524 aa		13.44	□□□□□ -0.26
SORBS3-222	ENST00000524057	NOB1	Q9ULX3	412 aa	Known RBP	13.44	□□□□□ -0.26
SORBS3-222	ENST00000524057	TMEM265	A0A087WTH1	108 aa		13.43	□□□□□ -0.26
SORBS3-222	ENST00000524057	CT47B1	P0C2W7	299 aa	Predicted RBP	13.43	□□□□□ -0.26
SORBS3-222	ENST00000524057	HOXD11	P31277	338 aa	Predicted RBP	13.43	□□□□□ -0.26
SORBS3-222	ENST00000524057	RTP1	P59025	263 aa		13.43	□□□□□ -0.26
SORBS3-222	ENST00000524057	SH3D19	Q5HYK7	790 aa		13.43	□□□□□ -0.26
SORBS3-222	ENST00000524057	MORN1	Q5T089	497 aa		13.43	□□□□□ -0.26
SORBS3-222	ENST00000524057	ANKRD44	Q8N8A2	993 aa		13.43	□□□□□ -0.26
SORBS3-222	ENST00000524057	SOCS4	Q8WXH5	440 aa		13.43	□□□□□ -0.26
SORBS3-222	ENST00000524057	BAD	Q92934	168 aa		13.43	□□□□□ -0.26
SORBS3-222	ENST00000524057	SRCIN1	Q9C0H9	1055 aa		13.43	□□□□□ -0.26
SORBS3-222	ENST00000524057	RBPJL	Q9UBG7	517 aa		13.43	□□□□□ -0.26
SORBS3-222	ENST00000524057	FAM196B	A6NMK8	535 aa		13.42	□□□□□ -0.26
SORBS3-222	ENST00000524057	RGS2	P41220	211 aa		13.42	□□□□□ -0.26
SORBS3-222	ENST00000524057	MAP3K12	Q12852	859 aa		13.42	□□□□□ -0.26
SORBS3-222	ENST00000524057	PICALM	Q13492	652 aa		13.42	□□□□□ -0.26
SORBS3-222	ENST00000524057	RRP1B	Q14684	758 aa	Known RBP	13.42	□□□□□ -0.26
SORBS3-222	ENST00000524057	GRIN2C	Q14957	1233 aa		13.42	□□□□□ -0.26
SORBS3-222	ENST00000524057	SLC4A10	Q6U841	1118 aa		13.42	□□□□□ -0.26
SORBS3-222	ENST00000524057	LPIN2	Q92539	896 aa		13.42	□□□□□ -0.26
SORBS3-222	ENST00000524057	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.42	□□□□□ -0.26
SORBS3-222	ENST00000524057	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.42	□□□□□ -0.26	1e-10	■□□□□ 9.8
SORBS3-222	ENST00000524057	SMC4	Q9NTJ3	1288 aa		13.42	□□□□□ -0.26
SORBS3-222	ENST00000524057	CACNA1F	O60840	1977 aa		13.41	□□□□□ -0.26
SORBS3-222	ENST00000524057	UTY	O14607	1347 aa		13.41	□□□□□ -0.26
SORBS3-222	ENST00000524057	SALL1	Q9NSC2	1324 aa		13.41	□□□□□ -0.26
SORBS3-222	ENST00000524057	SLC5A1	P13866	664 aa		13.41	□□□□□ -0.26
SORBS3-222	ENST00000524057	MAPK4	P31152	587 aa		13.41	□□□□□ -0.26
SORBS3-222	ENST00000524057	HOXA7	P31268	230 aa	Predicted RBP	13.41	□□□□□ -0.26
SORBS3-222	ENST00000524057	PDE3A	Q14432	1141 aa		13.41	□□□□□ -0.26
SORBS3-222	ENST00000524057	GPR142	Q7Z601	462 aa		13.41	□□□□□ -0.26
SORBS3-222	ENST00000524057	LPAR1	Q92633	364 aa		13.41	□□□□□ -0.26
SORBS3-222	ENST00000524057	TBC1D2	Q9BYX2	928 aa		13.41	□□□□□ -0.26
SORBS3-222	ENST00000524057	USP44	Q9H0E7	712 aa		13.41	□□□□□ -0.26
SORBS3-222	ENST00000524057	PORCN	Q9H237	461 aa		13.41	□□□□□ -0.26
SORBS3-222	ENST00000524057	ATP11B	Q9Y2G3	1177 aa		13.41	□□□□□ -0.26
SORBS3-222	ENST00000524057	DOCK1	Q14185	1865 aa		13.41	□□□□□ -0.26
SORBS3-222	ENST00000524057	RFX7	Q2KHR2	1363 aa		13.41	□□□□□ -0.26
SORBS3-222	ENST00000524057	GAK	O14976	1311 aa		13.4	□□□□□ -0.26
SORBS3-222	ENST00000524057	PTPRC	P08575	1304 aa		13.4	□□□□□ -0.26
SORBS3-222	ENST00000524057	USP17L5	A8MUK1	530 aa		13.4	□□□□□ -0.26
SORBS3-222	ENST00000524057	CAP2	P40123	477 aa		13.4	□□□□□ -0.26
SORBS3-222	ENST00000524057	HERVK_113	P62684	666 aa		13.4	□□□□□ -0.26
SORBS3-222	ENST00000524057	IRX3	P78415	501 aa	Predicted RBP	13.4	□□□□□ -0.26
SORBS3-222	ENST00000524057	POTEE	Q6S8J3	1075 aa		13.4	□□□□□ -0.26
SORBS3-222	ENST00000524057	SLC39A5	Q6ZMH5	540 aa		13.4	□□□□□ -0.26
SORBS3-222	ENST00000524057	PLEKHH3	Q7Z736	793 aa		13.4	□□□□□ -0.26
SORBS3-222	ENST00000524057	EDC3	Q96F86	508 aa	Known RBP	13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms