RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 CEP44Q9C0F1 390 aa7.98□□□□□ -1.13
EFCAB13-213ENST00000523978 PPM1HQ9ULR3 514 aa7.98□□□□□ -1.13
EFCAB13-213ENST00000523978 PLAGL2Q9UPG8 496 aa7.98□□□□□ -1.13
EFCAB13-213ENST00000523978 DCDC2CA8MYV0 355 aa7.97□□□□□ -1.13
EFCAB13-213ENST00000523978 TRIM37O94972 964 aa7.97□□□□□ -1.13
EFCAB13-213ENST00000523978 IFI16Q16666 785 aaKnown RBP7.97□□□□□ -1.13
EFCAB13-213ENST00000523978 ALG1LQ6GMV1 187 aa7.97□□□□□ -1.13
EFCAB13-213ENST00000523978 MKNK2Q9HBH9 465 aa7.97□□□□□ -1.13
EFCAB13-213ENST00000523978 USP35Q9P2H5 1018 aa7.97□□□□□ -1.13
EFCAB13-213ENST00000523978 SAMM50Q9Y512 469 aa7.97□□□□□ -1.13
EFCAB13-213ENST00000523978 CELA3AP09093 270 aa7.96□□□□□ -1.14
EFCAB13-213ENST00000523978 ITIH2P19823 946 aa7.96□□□□□ -1.14
EFCAB13-213ENST00000523978 FUT4P22083 530 aa7.96□□□□□ -1.14
EFCAB13-213ENST00000523978 PRKCQQ04759 706 aa7.96□□□□□ -1.14
EFCAB13-213ENST00000523978 TMCO4Q5TGY1 634 aa7.96□□□□□ -1.14
EFCAB13-213ENST00000523978 LLGL2Q6P1M3 1020 aa7.96□□□□□ -1.14
EFCAB13-213ENST00000523978 C12orf40Q86WS4 652 aa7.96□□□□□ -1.14
EFCAB13-213ENST00000523978 CERS3Q8IU89 383 aa7.96□□□□□ -1.14
EFCAB13-213ENST00000523978 HEXIM2Q96MH2 286 aaKnown RBP7.96□□□□□ -1.14
EFCAB13-213ENST00000523978 ADAMTS6Q9UKP5 1117 aa7.96□□□□□ -1.14
EFCAB13-213ENST00000523978 VAV3Q9UKW4 847 aa7.96□□□□□ -1.14
EFCAB13-213ENST00000523978 RING1Q06587 406 aa7.95□□□□□ -1.14
EFCAB13-213ENST00000523978 AOC3Q16853 763 aa7.95□□□□□ -1.14
EFCAB13-213ENST00000523978 FAM214BQ7L5A3 538 aa7.95□□□□□ -1.14
EFCAB13-213ENST00000523978 HRASLS5Q96KN8 279 aa7.95□□□□□ -1.14
EFCAB13-213ENST00000523978 PICK1Q9NRD5 415 aa7.95□□□□□ -1.14
EFCAB13-213ENST00000523978 GIPC1O14908 333 aa7.94□□□□□ -1.14
EFCAB13-213ENST00000523978 CENPBP07199 599 aaPredicted RBP7.94□□□□□ -1.14
EFCAB13-213ENST00000523978 RNASE1P07998 156 aaKnown RBP7.94□□□□□ -1.14
EFCAB13-213ENST00000523978 USP17L7P0C7H9 530 aa7.94□□□□□ -1.14
EFCAB13-213ENST00000523978 ATP2B2Q01814 1243 aa7.94□□□□□ -1.14
EFCAB13-213ENST00000523978 KCNA1Q09470 495 aa7.94□□□□□ -1.14
EFCAB13-213ENST00000523978 ZBTB37Q5TC79 503 aa7.94□□□□□ -1.14
EFCAB13-213ENST00000523978 PCNX4Q63HM2 1172 aa7.94□□□□□ -1.14
EFCAB13-213ENST00000523978 ANKRD24Q8TF21 1146 aa7.94□□□□□ -1.14
EFCAB13-213ENST00000523978 NAP1L5Q96NT1 182 aaPredicted RBP7.94□□□□□ -1.14
EFCAB13-213ENST00000523978 C12orf49Q9H741 205 aa7.94□□□□□ -1.14
EFCAB13-213ENST00000523978 RC3H2Q9HBD1 1191 aaKnown RBP7.94□□□□□ -1.14
EFCAB13-213ENST00000523978 PRDM10Q9NQV6 1147 aa7.94□□□□□ -1.14
EFCAB13-213ENST00000523978 MBNL3Q9NUK0 354 aaKnown RBP7.94□□□□□ -1.14
EFCAB13-213ENST00000523978 PCDHA4Q9UN74 947 aa7.94□□□□□ -1.14
EFCAB13-213ENST00000523978 ARID4BQ4LE39 1312 aaPredicted RBP7.94□□□□□ -1.14
EFCAB13-213ENST00000523978 TMEM265A0A087WTH1 108 aa7.93□□□□□ -1.14
EFCAB13-213ENST00000523978 P4HBP07237 508 aaKnown RBP7.93□□□□□ -1.14
EFCAB13-213ENST00000523978 ZEB1P37275 1124 aaPredicted RBP7.93□□□□□ -1.14
EFCAB13-213ENST00000523978 LRRC14Q15048 493 aa7.93□□□□□ -1.14
EFCAB13-213ENST00000523978 ZNF428Q96B54 188 aa7.93□□□□□ -1.14
EFCAB13-213ENST00000523978 TNKS2Q9H2K2 1166 aa7.93□□□□□ -1.14
EFCAB13-213ENST00000523978 SPG7Q9UQ90 795 aa7.93□□□□□ -1.14
EFCAB13-213ENST00000523978 FANCGO15287 622 aa7.92□□□□□ -1.14
EFCAB13-213ENST00000523978 MFAP1P55081 439 aaKnown RBP7.92□□□□□ -1.14
EFCAB13-213ENST00000523978 POU5F2Q8N7G0 328 aa7.92□□□□□ -1.14
EFCAB13-213ENST00000523978 CWC22Q9HCG8 908 aaKnown RBP7.92□□□□□ -1.14
EFCAB13-213ENST00000523978 FAM8A1Q9UBU6 413 aa7.92□□□□□ -1.14
EFCAB13-213ENST00000523978 CARMIL2Q6F5E8 1435 aa7.92□□□□□ -1.14
EFCAB13-213ENST00000523978 BIN1O00499 593 aa7.91□□□□□ -1.14
EFCAB13-213ENST00000523978 PPM1GO15355 546 aaPredicted RBP7.91□□□□□ -1.14
EFCAB13-213ENST00000523978 PTPN11Q06124 597 aaPredicted RBP7.91□□□□□ -1.14
EFCAB13-213ENST00000523978 LRRN4CLQ8ND94 238 aa7.91□□□□□ -1.14
EFCAB13-213ENST00000523978 PI4K2BQ8TCG2 481 aa7.91□□□□□ -1.14
EFCAB13-213ENST00000523978 ELMO3Q96BJ8 720 aa7.91□□□□□ -1.14
EFCAB13-213ENST00000523978 GTF2IRD1Q9UHL9 959 aa7.91□□□□□ -1.14
EFCAB13-213ENST00000523978 CYP8B1Q9UNU6 501 aa7.91□□□□□ -1.14
EFCAB13-213ENST00000523978 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.91□□□□□ -1.14
EFCAB13-213ENST00000523978 IGF2BP3O00425 579 aaKnown RBP eCLIP7.9□□□□□ -1.14
EFCAB13-213ENST00000523978 INPP5AQ14642 412 aa7.9□□□□□ -1.14
EFCAB13-213ENST00000523978 ANGEL2Q5VTE6 544 aaKnown RBP7.9□□□□□ -1.14
EFCAB13-213ENST00000523978 SCARA3Q6AZY7 606 aa7.9□□□□□ -1.14
EFCAB13-213ENST00000523978 LRFN4Q6PJG9 635 aa7.9□□□□□ -1.14
EFCAB13-213ENST00000523978 CDC37L1Q7L3B6 337 aa7.9□□□□□ -1.14
EFCAB13-213ENST00000523978 ARMCX6Q7L4S7 300 aa7.9□□□□□ -1.14
EFCAB13-213ENST00000523978 ATG4DQ86TL0 474 aaPredicted RBP7.9□□□□□ -1.14
EFCAB13-213ENST00000523978 SPACA3Q8IXA5 215 aa7.9□□□□□ -1.14
EFCAB13-213ENST00000523978 PRAMEF27A3QJZ7 478 aa7.89□□□□□ -1.15
EFCAB13-213ENST00000523978 EOMESO95936 686 aa7.89□□□□□ -1.15
EFCAB13-213ENST00000523978 LDHBP07195 334 aaKnown RBP7.89□□□□□ -1.15
EFCAB13-213ENST00000523978 C8AP07357 584 aa7.89□□□□□ -1.15
EFCAB13-213ENST00000523978 GAL3ST3Q96A11 431 aa7.89□□□□□ -1.15
EFCAB13-213ENST00000523978 TTF2Q9UNY4 1162 aaKnown RBP7.89□□□□□ -1.15
EFCAB13-213ENST00000523978 SNX11Q9Y5W9 270 aa7.89□□□□□ -1.15
EFCAB13-213ENST00000523978 SETQ01105 290 aaPredicted RBP7.88□□□□□ -1.15
EFCAB13-213ENST00000523978 NKPD1Q17RQ9 610 aa7.88□□□□□ -1.15
EFCAB13-213ENST00000523978 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.88□□□□□ -1.15
EFCAB13-213ENST00000523978 AEBP1Q8IUX7 1158 aa7.88□□□□□ -1.15
EFCAB13-213ENST00000523978 KCT2Q8NC54 265 aa7.88□□□□□ -1.15
EFCAB13-213ENST00000523978 PLPPR2Q96GM1 343 aa7.88□□□□□ -1.15
EFCAB13-213ENST00000523978 CCDC136Q96JN2 1154 aa7.88□□□□□ -1.15
EFCAB13-213ENST00000523978 FBRSQ9HAH7 460 aa7.88□□□□□ -1.15
EFCAB13-213ENST00000523978 PRDM7Q9NQW5 492 aa7.88□□□□□ -1.15
EFCAB13-213ENST00000523978 KRTAP4-8A0A0G2JLE6 195 aa7.87□□□□□ -1.15
EFCAB13-213ENST00000523978 NCLP19338 710 aaKnown RBP7.87□□□□□ -1.15
EFCAB13-213ENST00000523978 SLC23A3Q6PIS1 610 aa7.87□□□□□ -1.15
EFCAB13-213ENST00000523978 SV2BQ7L1I2 683 aa7.87□□□□□ -1.15
EFCAB13-213ENST00000523978 CYFIP1Q7L576 1253 aa7.87□□□□□ -1.15
EFCAB13-213ENST00000523978 ZNF507Q8TCN5 953 aa7.87□□□□□ -1.15
EFCAB13-213ENST00000523978 FAM168AQ92567 244 aa7.87□□□□□ -1.15
EFCAB13-213ENST00000523978 GNAT3A8MTJ3 354 aa7.86□□□□□ -1.15
EFCAB13-213ENST00000523978 LRIG2O94898 1065 aa7.86□□□□□ -1.15
EFCAB13-213ENST00000523978 SLITRK5O94991 958 aa7.86□□□□□ -1.15
EFCAB13-213ENST00000523978 CANXP27824 592 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms