RNA–Protein interactions for RNA: ENST00000523931.1

NDRG1-228, Transcript of N-myc downstream regulated 1, humanhuman

TSL 3

Gene NDRG1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-228ENST00000523931 G2E3Q7L622 706 aa12.42□□□□□ -0.42
NDRG1-228ENST00000523931 PRDM5Q9NQX1 630 aaPredicted RBP12.42□□□□□ -0.42
NDRG1-228ENST00000523931 ATP11BQ9Y2G3 1177 aa12.42□□□□□ -0.42
NDRG1-228ENST00000523931 PHF20L1A8MW92 1017 aa12.41□□□□□ -0.42
NDRG1-228ENST00000523931 CT47B1P0C2W7 299 aaPredicted RBP12.41□□□□□ -0.42
NDRG1-228ENST00000523931 XRCC5P13010 732 aaKnown RBP12.41□□□□□ -0.42
NDRG1-228ENST00000523931 FOXO4P98177 505 aa12.41□□□□□ -0.42
NDRG1-228ENST00000523931 FLIIQ13045 1269 aa12.41□□□□□ -0.42
NDRG1-228ENST00000523931 FKBP5Q13451 457 aaPredicted RBP12.41□□□□□ -0.42
NDRG1-228ENST00000523931 TRMT44Q8IYL2 757 aaKnown RBP12.41□□□□□ -0.42
NDRG1-228ENST00000523931 SOCS4Q8WXH5 440 aa12.41□□□□□ -0.42
NDRG1-228ENST00000523931 BADQ92934 168 aa12.41□□□□□ -0.42
NDRG1-228ENST00000523931 SNX27Q96L92 541 aa12.41□□□□□ -0.42
NDRG1-228ENST00000523931 NUDT12Q9BQG2 462 aa12.41□□□□□ -0.42
NDRG1-228ENST00000523931 SUGT1Q9Y2Z0 365 aa12.41□□□□□ -0.42
NDRG1-228ENST00000523931 LRRFIP2Q9Y608 721 aaKnown RBP12.41□□□□□ -0.42
NDRG1-228ENST00000523931 DOCK2Q92608 1830 aa12.41□□□□□ -0.42
NDRG1-228ENST00000523931 DOCK1Q14185 1865 aa12.4□□□□□ -0.42
NDRG1-228ENST00000523931 FRMPD3Q5JV73 1810 aa12.4□□□□□ -0.42
NDRG1-228ENST00000523931 PDE3AQ14432 1141 aa12.4□□□□□ -0.42
NDRG1-228ENST00000523931 CAVIN4Q5BKX8 364 aa12.4□□□□□ -0.42
NDRG1-228ENST00000523931 CDC42EP5Q6NZY7 148 aa12.4□□□□□ -0.42
NDRG1-228ENST00000523931 LMBR1LQ6UX01 489 aa12.4□□□□□ -0.42
NDRG1-228ENST00000523931 FBXO33Q7Z6M2 555 aa12.4□□□□□ -0.42
NDRG1-228ENST00000523931 RNPC3Q96LT9 517 aaKnown RBP12.4□□□□□ -0.42
NDRG1-228ENST00000523931 PHIPQ8WWQ0 1821 aa12.39□□□□□ -0.43
NDRG1-228ENST00000523931 PABPC4Q13310 644 aaKnown RBP eCLIP12.39□□□□□ -0.43
NDRG1-228ENST00000523931 CCDC84Q86UT8 332 aaPredicted RBP12.39□□□□□ -0.43
NDRG1-228ENST00000523931 PROCA1Q8NCQ7 364 aaPredicted RBP12.39□□□□□ -0.43
NDRG1-228ENST00000523931 LINS1Q8NG48 757 aa12.39□□□□□ -0.43
NDRG1-228ENST00000523931 GAS2L1Q99501 681 aaPredicted RBP12.39□□□□□ -0.43
NDRG1-228ENST00000523931 FAM198AQ9UFP1 575 aa12.39□□□□□ -0.43
NDRG1-228ENST00000523931 DAGLAQ9Y4D2 1042 aa12.39□□□□□ -0.43
NDRG1-228ENST00000523931 CTNND1O60716 968 aaKnown RBP12.38□□□□□ -0.43
NDRG1-228ENST00000523931 DNAJB2P25686 324 aa12.38□□□□□ -0.43
NDRG1-228ENST00000523931 ALDH1L2Q3SY69 923 aa12.38□□□□□ -0.43
NDRG1-228ENST00000523931 ZSCAN29Q8IWY8 852 aaPredicted RBP12.38□□□□□ -0.43
NDRG1-228ENST00000523931 ZFPM1Q8IX07 1006 aa12.38□□□□□ -0.43
NDRG1-228ENST00000523931 MRPL50Q8N5N7 158 aaKnown RBP12.38□□□□□ -0.43
NDRG1-228ENST00000523931 SSH1Q8WYL5 1049 aa12.38□□□□□ -0.43
NDRG1-228ENST00000523931 NECAB3Q96P71 396 aaPredicted RBP12.38□□□□□ -0.43
NDRG1-228ENST00000523931 ASCC2Q9H1I8 757 aaPredicted RBP12.38□□□□□ -0.43
NDRG1-228ENST00000523931 ZNF576Q9H609 170 aa12.38□□□□□ -0.43
NDRG1-228ENST00000523931 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.38□□□□□ -0.43
NDRG1-228ENST00000523931 ATRNL1Q5VV63 1379 aa12.38□□□□□ -0.43
NDRG1-228ENST00000523931 TCF20Q9UGU0 1960 aaKnown RBP12.38□□□□□ -0.43
NDRG1-228ENST00000523931 RGS2P41220 211 aa12.37□□□□□ -0.43
NDRG1-228ENST00000523931 DIXDC1Q155Q3 683 aa12.37□□□□□ -0.43
NDRG1-228ENST00000523931 CCL14Q16627 93 aa12.37□□□□□ -0.43
NDRG1-228ENST00000523931 AKNAD1Q5T1N1 836 aa12.37□□□□□ -0.43
NDRG1-228ENST00000523931 POTEEQ6S8J3 1075 aa12.37□□□□□ -0.43
NDRG1-228ENST00000523931 ALYREFQ86V81 257 aaKnown RBP12.37□□□□□ -0.43
NDRG1-228ENST00000523931 CCAR1Q8IX12 1150 aaKnown RBP12.37□□□□□ -0.43
NDRG1-228ENST00000523931 DNAAF4Q8WXU2 420 aa12.37□□□□□ -0.43
NDRG1-228ENST00000523931 YTHDC1Q96MU7 727 aaKnown RBP12.37□□□□□ -0.43
NDRG1-228ENST00000523931 LRFN3Q9BTN0 628 aa12.37□□□□□ -0.43
NDRG1-228ENST00000523931 SMC4Q9NTJ3 1288 aa12.37□□□□□ -0.43
NDRG1-228ENST00000523931 USP40Q9NVE5 1235 aa12.37□□□□□ -0.43
NDRG1-228ENST00000523931 MORF4L1Q9UBU8 362 aa12.37□□□□□ -0.43
NDRG1-228ENST00000523931 LOC285556D6RIA3 1793 aa12.36□□□□□ -0.43
NDRG1-228ENST00000523931 DNM1LO00429 736 aa12.36□□□□□ -0.43
NDRG1-228ENST00000523931 HMGCS2P54868 508 aa12.36□□□□□ -0.43
NDRG1-228ENST00000523931 SPP2Q13103 211 aa12.36□□□□□ -0.43
NDRG1-228ENST00000523931 TIFAQ96CG3 184 aa12.36□□□□□ -0.43
NDRG1-228ENST00000523931 APBA2Q99767 749 aa12.36□□□□□ -0.43
NDRG1-228ENST00000523931 PUS3Q9BZE2 481 aaKnown RBP12.36□□□□□ -0.43
NDRG1-228ENST00000523931 MROH5Q6ZUA9 1318 aa12.36□□□□□ -0.43
NDRG1-228ENST00000523931 MSCO60682 206 aa12.35□□□□□ -0.43
NDRG1-228ENST00000523931 CNGA1P29973 690 aa12.35□□□□□ -0.43
NDRG1-228ENST00000523931 MAPK4P31152 587 aa12.35□□□□□ -0.43
NDRG1-228ENST00000523931 RGS3P49796 1198 aa12.35□□□□□ -0.43
NDRG1-228ENST00000523931 IRX3P78415 501 aaPredicted RBP12.35□□□□□ -0.43
NDRG1-228ENST00000523931 CCDC85BQ15834 202 aaPredicted RBP12.35□□□□□ -0.43
NDRG1-228ENST00000523931 TRIM60Q495X7 471 aa12.35□□□□□ -0.43
NDRG1-228ENST00000523931 EPHA10Q5JZY3 1008 aa12.35□□□□□ -0.43
NDRG1-228ENST00000523931 MFSD14CQ5VZR4 134 aa12.35□□□□□ -0.43
NDRG1-228ENST00000523931 GPRC5AQ8NFJ5 357 aa12.35□□□□□ -0.43
NDRG1-228ENST00000523931 LPAR1Q92633 364 aa12.35□□□□□ -0.43
NDRG1-228ENST00000523931 PDLIM7Q9NR12 457 aa12.35□□□□□ -0.43
NDRG1-228ENST00000523931 DDX20Q9UHI6 824 aaKnown RBP12.35□□□□□ -0.43
NDRG1-228ENST00000523931 RLFQ13129 1914 aa12.35□□□□□ -0.43
NDRG1-228ENST00000523931 PTPRCP08575 1304 aa12.35□□□□□ -0.43
NDRG1-228ENST00000523931 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.34□□□□□ -0.43
NDRG1-228ENST00000523931 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.34□□□□□ -0.43
NDRG1-228ENST00000523931 F6X3S4 739 aa12.34□□□□□ -0.43
NDRG1-228ENST00000523931 ENTPD3O75355 529 aa12.34□□□□□ -0.43
NDRG1-228ENST00000523931 RARSP54136 660 aaKnown RBP12.34□□□□□ -0.43
NDRG1-228ENST00000523931 TMEM31Q5JXX7 168 aa12.34□□□□□ -0.43
NDRG1-228ENST00000523931 ZNF280CQ8ND82 737 aa12.34□□□□□ -0.43
NDRG1-228ENST00000523931 WDR66Q8TBY9 1149 aa12.34□□□□□ -0.43
NDRG1-228ENST00000523931 USP6NLQ92738 828 aa12.34□□□□□ -0.43
NDRG1-228ENST00000523931 PRDM12Q9H4Q4 367 aa12.34□□□□□ -0.43
NDRG1-228ENST00000523931 CWC22Q9HCG8 908 aaKnown RBP12.34□□□□□ -0.43
NDRG1-228ENST00000523931 MYH13Q9UKX3 1938 aa12.33□□□□□ -0.44
NDRG1-228ENST00000523931 CACNA1FO60840 1977 aa12.33□□□□□ -0.44
NDRG1-228ENST00000523931 TRIM43BA6NCK2 446 aa12.33□□□□□ -0.44
NDRG1-228ENST00000523931 PEX10O60683 326 aa12.33□□□□□ -0.44
NDRG1-228ENST00000523931 SLURP2P0DP57 97 aa12.33□□□□□ -0.44
NDRG1-228ENST00000523931 METTL24Q5JXM2 366 aa12.33□□□□□ -0.44
NDRG1-228ENST00000523931 GJC2Q5T442 439 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms