RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 OTOP1Q7RTM1 612 aa20.93■□□□□ 0.94
CCNC-213ENST00000523541 AFG3L2Q9Y4W6 797 aa20.93■□□□□ 0.94
CCNC-213ENST00000523541 FLT1P17948 1338 aa20.93■□□□□ 0.94
CCNC-213ENST00000523541 MAST2Q6P0Q8 1798 aa20.92■□□□□ 0.94
CCNC-213ENST00000523541 TLR2O60603 784 aa20.92■□□□□ 0.94
CCNC-213ENST00000523541 SLC9C2Q5TAH2 1124 aa20.92■□□□□ 0.94
CCNC-213ENST00000523541 HAUS7Q99871 368 aa20.92■□□□□ 0.94
CCNC-213ENST00000523541 TRIM34Q9BYJ4 488 aa20.92■□□□□ 0.94
CCNC-213ENST00000523541 GOLIM4O00461 696 aa20.91■□□□□ 0.94
CCNC-213ENST00000523541 ECM2O94769 699 aaPredicted RBP20.91■□□□□ 0.94
CCNC-213ENST00000523541 HLA-DOAP06340 250 aa20.91■□□□□ 0.94
CCNC-213ENST00000523541 CAP2P40123 477 aa20.91■□□□□ 0.94
CCNC-213ENST00000523541 MAPKAPK5Q8IW41 473 aa20.91■□□□□ 0.94
CCNC-213ENST00000523541 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.91■□□□□ 0.94
CCNC-213ENST00000523541 PAG1Q9NWQ8 432 aa20.91■□□□□ 0.94
CCNC-213ENST00000523541 SLC45A1Q9Y2W3 748 aa20.91■□□□□ 0.94
CCNC-213ENST00000523541 NDUFB9Q9Y6M9 179 aa20.91■□□□□ 0.94
CCNC-213ENST00000523541 A0A0G2JLL6 359 aaPredicted RBP20.9■□□□□ 0.94
CCNC-213ENST00000523541 FAM196BA6NMK8 535 aa20.9■□□□□ 0.94
CCNC-213ENST00000523541 PDHXO00330 501 aa20.9■□□□□ 0.94
CCNC-213ENST00000523541 SLURP2P0DP57 97 aa20.9■□□□□ 0.94
CCNC-213ENST00000523541 USP5P45974 858 aa20.9■□□□□ 0.94
CCNC-213ENST00000523541 DYNLL1P63167 89 aaKnown RBP20.9■□□□□ 0.94
CCNC-213ENST00000523541 GADL1Q6ZQY3 521 aa20.9■□□□□ 0.94
CCNC-213ENST00000523541 PRRT2Q7Z6L0 340 aaPredicted RBP20.9■□□□□ 0.94
CCNC-213ENST00000523541 GPATCH3Q96I76 525 aa20.9■□□□□ 0.94
CCNC-213ENST00000523541 YTHDC1Q96MU7 727 aaKnown RBP20.9■□□□□ 0.94
CCNC-213ENST00000523541 DNAJC2Q99543 621 aaKnown RBP20.9■□□□□ 0.94
CCNC-213ENST00000523541 TAOK2Q9UL54 1235 aa20.9■□□□□ 0.94
CCNC-213ENST00000523541 MAGEB6P1A0A0J9YX57 407 aa20.89■□□□□ 0.93
CCNC-213ENST00000523541 PDE6AP16499 860 aa20.89■□□□□ 0.93
CCNC-213ENST00000523541 RGS19P49795 217 aa20.89■□□□□ 0.93
CCNC-213ENST00000523541 MOGSQ13724 837 aa20.89■□□□□ 0.93
CCNC-213ENST00000523541 ZSCAN25Q6NSZ9 544 aa20.89■□□□□ 0.93
CCNC-213ENST00000523541 TTC6Q86TZ1 520 aa20.89■□□□□ 0.93
CCNC-213ENST00000523541 MIGA1Q8NAN2 632 aa20.89■□□□□ 0.93
CCNC-213ENST00000523541 RIOK1Q9BRS2 568 aaKnown RBP20.89■□□□□ 0.93
CCNC-213ENST00000523541 BOLA2Q9H3K6 86 aa20.89■□□□□ 0.93
CCNC-213ENST00000523541 ECHDC1Q9NTX5 307 aa20.89■□□□□ 0.93
CCNC-213ENST00000523541 GNRH1P01148 92 aa20.88■□□□□ 0.93
CCNC-213ENST00000523541 ASNSP08243 561 aa20.88■□□□□ 0.93
CCNC-213ENST00000523541 CRACR2BQ8N4Y2 399 aaPredicted RBP20.88■□□□□ 0.93
CCNC-213ENST00000523541 CRNKL1Q9BZJ0 848 aaKnown RBP20.88■□□□□ 0.93
CCNC-213ENST00000523541 EHD4Q9H223 541 aa20.88■□□□□ 0.93
CCNC-213ENST00000523541 AS3MTQ9HBK9 375 aa20.88■□□□□ 0.93
CCNC-213ENST00000523541 PALD1Q9ULE6 856 aa20.88■□□□□ 0.93
CCNC-213ENST00000523541 PTPN22Q9Y2R2 807 aa20.88■□□□□ 0.93
CCNC-213ENST00000523541 PCDHB15Q9Y5E8 787 aa20.88■□□□□ 0.93
CCNC-213ENST00000523541 ZNF532Q9HCE3 1301 aa20.87■□□□□ 0.93
CCNC-213ENST00000523541 TCRBV5S4A2TA0A5A2 114 aa20.87■□□□□ 0.93
CCNC-213ENST00000523541 TRIM75PA6NK02 468 aa20.87■□□□□ 0.93
CCNC-213ENST00000523541 USP17L5A8MUK1 530 aa20.87■□□□□ 0.93
CCNC-213ENST00000523541 ZNF280CQ8ND82 737 aa20.87■□□□□ 0.93
CCNC-213ENST00000523541 CPA4Q9UI42 421 aa20.87■□□□□ 0.93
CCNC-213ENST00000523541 DOCK1Q14185 1865 aa20.86■□□□□ 0.93
CCNC-213ENST00000523541 UBE3CQ15386 1083 aa20.86■□□□□ 0.93
CCNC-213ENST00000523541 SLC4A8Q2Y0W8 1093 aa20.86■□□□□ 0.93
CCNC-213ENST00000523541 GPAT2Q6NUI2 795 aa20.86■□□□□ 0.93
CCNC-213ENST00000523541 C17orf99Q6UX52 265 aa20.86■□□□□ 0.93
CCNC-213ENST00000523541 PROCA1Q8NCQ7 364 aaPredicted RBP20.86■□□□□ 0.93
CCNC-213ENST00000523541 PARK7Q99497 189 aaKnown RBP20.86■□□□□ 0.93
CCNC-213ENST00000523541 WDR18Q9BV38 432 aa20.86■□□□□ 0.93
CCNC-213ENST00000523541 SAP30BPQ9UHR5 308 aaKnown RBP20.86■□□□□ 0.93
CCNC-213ENST00000523541 SMARCA5O60264 1052 aaPredicted RBP20.85■□□□□ 0.93
CCNC-213ENST00000523541 ADD2P35612 726 aa20.85■□□□□ 0.93
CCNC-213ENST00000523541 CCDC84Q86UT8 332 aaPredicted RBP20.85■□□□□ 0.93
CCNC-213ENST00000523541 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.85■□□□□ 0.93
CCNC-213ENST00000523541 SERPINB13Q9UIV8 391 aa20.85■□□□□ 0.93
CCNC-213ENST00000523541 MYO5AQ9Y4I1 1855 aaKnown RBP20.85■□□□□ 0.93
CCNC-213ENST00000523541 PRMT2P55345 433 aa20.84■□□□□ 0.93
CCNC-213ENST00000523541 LACTBP83111 547 aaPredicted RBP20.84■□□□□ 0.93
CCNC-213ENST00000523541 TATDN1Q6P1N9 297 aa20.84■□□□□ 0.93
CCNC-213ENST00000523541 TTC41PQ6P2S7 1318 aa20.83■□□□□ 0.93
CCNC-213ENST00000523541 SPP2Q13103 211 aa20.83■□□□□ 0.93
CCNC-213ENST00000523541 PABPC4Q13310 644 aaKnown RBP eCLIP20.83■□□□□ 0.932e-6■□□□□ 9.8
CCNC-213ENST00000523541 HDAC1Q13547 482 aaPredicted RBP20.83■□□□□ 0.93
CCNC-213ENST00000523541 SH3D19Q5HYK7 790 aa20.83■□□□□ 0.93
CCNC-213ENST00000523541 GCC1Q96CN9 775 aa20.83■□□□□ 0.93
CCNC-213ENST00000523541 CRBNQ96SW2 442 aa20.83■□□□□ 0.93
CCNC-213ENST00000523541 ATP8A2Q9NTI2 1148 aa20.83■□□□□ 0.93
CCNC-213ENST00000523541 AGTPBP1Q9UPW5 1226 aa20.83■□□□□ 0.93
CCNC-213ENST00000523541 C19orf81C9J6K1 198 aa20.82■□□□□ 0.92
CCNC-213ENST00000523541 ERC2O15083 957 aa20.82■□□□□ 0.92
CCNC-213ENST00000523541 FMNL1O95466 1100 aaPredicted RBP20.82■□□□□ 0.92
CCNC-213ENST00000523541 CYP2C8P10632 490 aa20.82■□□□□ 0.92
CCNC-213ENST00000523541 RRP1BQ14684 758 aaKnown RBP20.82■□□□□ 0.92
CCNC-213ENST00000523541 LRRFIP1Q32MZ4 808 aaKnown RBP20.82■□□□□ 0.92
CCNC-213ENST00000523541 SLC9C1Q4G0N8 1177 aa20.82■□□□□ 0.92
CCNC-213ENST00000523541 NBPF11Q86T75 865 aa20.82■□□□□ 0.92
CCNC-213ENST00000523541 SMCR8Q8TEV9 937 aaPredicted RBP20.82■□□□□ 0.92
CCNC-213ENST00000523541 EDC3Q96F86 508 aaKnown RBP20.82■□□□□ 0.92
CCNC-213ENST00000523541 ARHGAP39Q9C0H5 1083 aa20.82■□□□□ 0.92
CCNC-213ENST00000523541 DNAJC18Q9H819 358 aa20.82■□□□□ 0.92
CCNC-213ENST00000523541 ZBTB47Q9UFB7 747 aaPredicted RBP20.82■□□□□ 0.92
CCNC-213ENST00000523541 PNMA3Q9UL41 463 aa20.82■□□□□ 0.92
CCNC-213ENST00000523541 POLR3DP05423 398 aaPredicted RBP20.81■□□□□ 0.92
CCNC-213ENST00000523541 HOXD10P28358 340 aa20.81■□□□□ 0.92
CCNC-213ENST00000523541 PTCH2Q9Y6C5 1203 aa20.81■□□□□ 0.92
CCNC-213ENST00000523541 ADGRA2Q96PE1 1338 aa20.8■□□□□ 0.92
CCNC-213ENST00000523541 ZFYP08048 801 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms