RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 RNF41Q9H4P4 317 aaPredicted RBP17.75■□□□□ 0.43
CSGALNACT1-211ENST00000522854 SERPINA10Q9UK55 444 aa17.75■□□□□ 0.43
CSGALNACT1-211ENST00000522854 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.75■□□□□ 0.43
CSGALNACT1-211ENST00000522854 IFIT3O14879 490 aaKnown RBP17.74■□□□□ 0.43
CSGALNACT1-211ENST00000522854 JAK2O60674 1132 aa17.74■□□□□ 0.43
CSGALNACT1-211ENST00000522854 YBX3P16989 372 aaKnown RBP eCLIP17.74■□□□□ 0.43
CSGALNACT1-211ENST00000522854 TMEM67Q5HYA8 995 aa17.74■□□□□ 0.43
CSGALNACT1-211ENST00000522854 GTF3C6Q969F1 213 aa17.74■□□□□ 0.43
CSGALNACT1-211ENST00000522854 INTS4Q96HW7 963 aaKnown RBP17.74■□□□□ 0.43
CSGALNACT1-211ENST00000522854 LY9Q9HBG7 655 aa17.74■□□□□ 0.43
CSGALNACT1-211ENST00000522854 ANGEL1Q9UNK9 670 aaKnown RBP17.74■□□□□ 0.43
CSGALNACT1-211ENST00000522854 CIAPIN1Q6FI81 312 aa17.73■□□□□ 0.43
CSGALNACT1-211ENST00000522854 CCDC144CPQ8IYA2 1237 aa17.73■□□□□ 0.43
CSGALNACT1-211ENST00000522854 SCAF8Q9UPN6 1271 aaKnown RBP17.73■□□□□ 0.43
CSGALNACT1-211ENST00000522854 CLRN2A0PK11 232 aa17.73■□□□□ 0.43
CSGALNACT1-211ENST00000522854 EGFRP00533 1210 aa17.73■□□□□ 0.43
CSGALNACT1-211ENST00000522854 FGRP09769 529 aa17.73■□□□□ 0.43
CSGALNACT1-211ENST00000522854 ESR2Q92731 530 aa17.73■□□□□ 0.43
CSGALNACT1-211ENST00000522854 HPS5Q9UPZ3 1129 aa17.73■□□□□ 0.43
CSGALNACT1-211ENST00000522854 ZNF541Q9H0D2 1346 aa17.72■□□□□ 0.43
CSGALNACT1-211ENST00000522854 LTBP3Q9NS15 1303 aa17.72■□□□□ 0.43
CSGALNACT1-211ENST00000522854 GOLGA8BA8MQT2 603 aa17.72■□□□□ 0.43
CSGALNACT1-211ENST00000522854 GJB2P29033 226 aa17.72■□□□□ 0.43
CSGALNACT1-211ENST00000522854 CERS3Q8IU89 383 aa17.72■□□□□ 0.43
CSGALNACT1-211ENST00000522854 IL27Q8NEV9 243 aa17.72■□□□□ 0.43
CSGALNACT1-211ENST00000522854 FAM198AQ9UFP1 575 aa17.72■□□□□ 0.43
CSGALNACT1-211ENST00000522854 ZDHHC9Q9Y397 364 aa17.72■□□□□ 0.43
CSGALNACT1-211ENST00000522854 GJA3Q9Y6H8 435 aa17.72■□□□□ 0.43
CSGALNACT1-211ENST00000522854 TNKSO95271 1327 aa17.72■□□□□ 0.43
CSGALNACT1-211ENST00000522854 PFKFB2O60825 505 aa17.71■□□□□ 0.43
CSGALNACT1-211ENST00000522854 HDLBPQ00341 1268 aaKnown RBP17.71■□□□□ 0.43
CSGALNACT1-211ENST00000522854 NFXL1Q6ZNB6 911 aa17.71■□□□□ 0.43
CSGALNACT1-211ENST00000522854 FBXL16Q8N461 479 aa17.71■□□□□ 0.43
CSGALNACT1-211ENST00000522854 CHAMP1Q96JM3 812 aa17.71■□□□□ 0.43
CSGALNACT1-211ENST00000522854 OSBPL5Q9H0X9 879 aaPredicted RBP17.71■□□□□ 0.43
CSGALNACT1-211ENST00000522854 SMC3Q9UQE7 1217 aa17.71■□□□□ 0.43
CSGALNACT1-211ENST00000522854 WDR19Q8NEZ3 1342 aa17.71■□□□□ 0.43
CSGALNACT1-211ENST00000522854 MYO3BQ8WXR4 1341 aa17.71■□□□□ 0.43
CSGALNACT1-211ENST00000522854 SBF1O95248 1867 aa17.71■□□□□ 0.43
CSGALNACT1-211ENST00000522854 CTDNEP1O95476 244 aa17.71■□□□□ 0.43
CSGALNACT1-211ENST00000522854 PDE4BQ07343 736 aa17.71■□□□□ 0.43
CSGALNACT1-211ENST00000522854 NBR1Q14596 966 aa17.71■□□□□ 0.43
CSGALNACT1-211ENST00000522854 MICU3Q86XE3 530 aa17.71■□□□□ 0.43
CSGALNACT1-211ENST00000522854 DDX11Q96FC9 970 aa17.71■□□□□ 0.43
CSGALNACT1-211ENST00000522854 MRIQ9BWK5 157 aa17.71■□□□□ 0.43
CSGALNACT1-211ENST00000522854 SPDYE2BA6NHP3 402 aa17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 FAM196BA6NMK8 535 aa17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 SLC3A2P08195 630 aaKnown RBP17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 SPDYE6P0CI01 402 aa17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 AMOTL1Q8IY63 956 aa17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 OGFOD1Q8N543 542 aa17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 ENAHQ8N8S7 591 aaPredicted RBP17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 TMEM87BQ96K49 555 aa17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 UBAC1Q9BSL1 405 aa17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 MKNK2Q9HBH9 465 aa17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 CWC22Q9HCG8 908 aaKnown RBP17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 ROBO3Q96MS0 1386 aa17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 DDTLA6NHG4 134 aaPredicted RBP17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 TSPY2A6NKD2 308 aa17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 FZD9O00144 591 aa17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 ORC4O43929 436 aa17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 CDK8P49336 464 aa17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 EVCP57679 992 aa17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 TFAP4Q01664 338 aa17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 WTAPQ15007 396 aa17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 RBM26Q5T8P6 1007 aaKnown RBP17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 APOA5Q6Q788 366 aa17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 SH3BP5LQ7L8J4 393 aa17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 CHMP4CQ96CF2 233 aa17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 ZNF274Q96GC6 653 aaPredicted RBP17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 ZSCAN10Q96SZ4 725 aaPredicted RBP17.7■□□□□ 0.42
CSGALNACT1-211ENST00000522854 SIPA1L1O43166 1804 aa17.69■□□□□ 0.42
CSGALNACT1-211ENST00000522854 TCP10L2B9ZVM9 353 aa17.69■□□□□ 0.42
CSGALNACT1-211ENST00000522854 RAB3GAP1Q15042 981 aa17.69■□□□□ 0.42
CSGALNACT1-211ENST00000522854 SEC23AQ15436 765 aa17.69■□□□□ 0.42
CSGALNACT1-211ENST00000522854 NBPF9Q3BBW0 867 aa17.69■□□□□ 0.42
CSGALNACT1-211ENST00000522854 AGBL3Q8NEM8 1001 aa17.69■□□□□ 0.42
CSGALNACT1-211ENST00000522854 TNPO1Q92973 898 aaKnown RBP17.69■□□□□ 0.42
CSGALNACT1-211ENST00000522854 RASA1P20936 1047 aa17.68■□□□□ 0.42
CSGALNACT1-211ENST00000522854 GMPSP49915 693 aaPredicted RBP17.68■□□□□ 0.42
CSGALNACT1-211ENST00000522854 DLGAP5Q15398 846 aa17.68■□□□□ 0.42
CSGALNACT1-211ENST00000522854 C16orf86Q6ZW13 317 aa17.68■□□□□ 0.42
CSGALNACT1-211ENST00000522854 IL17RBQ9NRM6 502 aa17.68■□□□□ 0.42
CSGALNACT1-211ENST00000522854 HDAC9Q9UKV0 1011 aa17.68■□□□□ 0.42
CSGALNACT1-211ENST00000522854 MYH8P13535 1937 aa17.68■□□□□ 0.42
CSGALNACT1-211ENST00000522854 CDC27P30260 824 aa17.68■□□□□ 0.42
CSGALNACT1-211ENST00000522854 ADD1P35611 737 aaKnown RBP17.68■□□□□ 0.42
CSGALNACT1-211ENST00000522854 FOSBP53539 338 aa17.68■□□□□ 0.42
CSGALNACT1-211ENST00000522854 ZSCAN29Q8IWY8 852 aaPredicted RBP17.68■□□□□ 0.42
CSGALNACT1-211ENST00000522854 NSUN7Q8NE18 718 aaKnown RBP17.68■□□□□ 0.42
CSGALNACT1-211ENST00000522854 CIZ1Q9ULV3 898 aaPredicted RBP17.68■□□□□ 0.42
CSGALNACT1-211ENST00000522854 ERICH2A1L162 156 aa17.67■□□□□ 0.42
CSGALNACT1-211ENST00000522854 CCDC69A6NI79 296 aa17.67■□□□□ 0.42
CSGALNACT1-211ENST00000522854 SYT1P21579 422 aa17.67■□□□□ 0.42
CSGALNACT1-211ENST00000522854 LIFRP42702 1097 aa17.67■□□□□ 0.42
CSGALNACT1-211ENST00000522854 EIF6P56537 245 aaKnown RBP17.67■□□□□ 0.42
CSGALNACT1-211ENST00000522854 TNIP1Q15025 636 aa17.67■□□□□ 0.42
CSGALNACT1-211ENST00000522854 FOXD4L6Q3SYB3 417 aaPredicted RBP17.67■□□□□ 0.42
CSGALNACT1-211ENST00000522854 FOXD4L3Q6VB84 417 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms