RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 CALM1P0DP23 149 aa11.31□□□□□ -0.6
SPARC-205ENST00000522348 CALM2P0DP24 149 aa11.31□□□□□ -0.6
SPARC-205ENST00000522348 CALM3P0DP25 149 aa11.31□□□□□ -0.6
SPARC-205ENST00000522348 FDPSP14324 419 aaKnown RBP11.31□□□□□ -0.6
SPARC-205ENST00000522348 DPEP1P16444 411 aa11.31□□□□□ -0.6
SPARC-205ENST00000522348 ADD1P35611 737 aaKnown RBP11.31□□□□□ -0.6
SPARC-205ENST00000522348 IARSP41252 1262 aaKnown RBP11.31□□□□□ -0.6
SPARC-205ENST00000522348 RHBDL3P58872 404 aa11.31□□□□□ -0.6
SPARC-205ENST00000522348 SEC23AQ15436 765 aa11.31□□□□□ -0.6
SPARC-205ENST00000522348 ATL3Q6DD88 541 aa11.31□□□□□ -0.6
SPARC-205ENST00000522348 CATIPQ7Z7H3 387 aa11.31□□□□□ -0.6
SPARC-205ENST00000522348 MAPKAPK5Q8IW41 473 aa11.31□□□□□ -0.6
SPARC-205ENST00000522348 ZNF444Q8N0Y2 327 aaPredicted RBP11.31□□□□□ -0.6
SPARC-205ENST00000522348 CERS5Q8N5B7 392 aa11.31□□□□□ -0.6
SPARC-205ENST00000522348 WASF1Q92558 559 aa11.31□□□□□ -0.6
SPARC-205ENST00000522348 TEKT1Q969V4 418 aa11.31□□□□□ -0.6
SPARC-205ENST00000522348 PSMD1Q99460 953 aa11.31□□□□□ -0.6
SPARC-205ENST00000522348 ZKSCAN3Q9BRR0 538 aa11.31□□□□□ -0.6
SPARC-205ENST00000522348 DBNDD1Q9H9R9 158 aa11.31□□□□□ -0.6
SPARC-205ENST00000522348 MKNK2Q9HBH9 465 aa11.31□□□□□ -0.6
SPARC-205ENST00000522348 ORC3Q9UBD5 711 aaPredicted RBP11.31□□□□□ -0.6
SPARC-205ENST00000522348 DAGLAQ9Y4D2 1042 aa11.31□□□□□ -0.6
SPARC-205ENST00000522348 C10orf71Q711Q0 1435 aa11.31□□□□□ -0.6
SPARC-205ENST00000522348 LTBP1Q14766 1721 aa11.31□□□□□ -0.6
SPARC-205ENST00000522348 TIAM2Q8IVF5 1701 aa11.3□□□□□ -0.6
SPARC-205ENST00000522348 DTNBO60941 627 aa11.3□□□□□ -0.6
SPARC-205ENST00000522348 CYP2D6P10635 497 aa11.3□□□□□ -0.6
SPARC-205ENST00000522348 IFNAR1P17181 557 aa11.3□□□□□ -0.6
SPARC-205ENST00000522348 KCNA3P22001 575 aa11.3□□□□□ -0.6
SPARC-205ENST00000522348 KRT85P78386 507 aa11.3□□□□□ -0.6
SPARC-205ENST00000522348 SSRP1Q08945 709 aaKnown RBP11.3□□□□□ -0.6
SPARC-205ENST00000522348 FOXD4L6Q3SYB3 417 aaPredicted RBP11.3□□□□□ -0.6
SPARC-205ENST00000522348 IFIT1BQ5T764 474 aaKnown RBP11.3□□□□□ -0.6
SPARC-205ENST00000522348 FOXD4L3Q6VB84 417 aaPredicted RBP11.3□□□□□ -0.6
SPARC-205ENST00000522348 CDC37L1Q7L3B6 337 aa11.3□□□□□ -0.6
SPARC-205ENST00000522348 TTC6Q86TZ1 520 aa11.3□□□□□ -0.6
SPARC-205ENST00000522348 DGKHQ86XP1 1220 aa11.3□□□□□ -0.6
SPARC-205ENST00000522348 FANCBQ8NB91 859 aa11.3□□□□□ -0.6
SPARC-205ENST00000522348 ANKS1AQ92625 1134 aa11.3□□□□□ -0.6
SPARC-205ENST00000522348 C8orf76Q96K31 380 aa11.3□□□□□ -0.6
SPARC-205ENST00000522348 SCAND2PQ9GZW5 306 aaPredicted RBP11.3□□□□□ -0.6
SPARC-205ENST00000522348 SENP2Q9HC62 589 aa11.3□□□□□ -0.6
SPARC-205ENST00000522348 TCP11L1Q9NUJ3 509 aa11.3□□□□□ -0.6
SPARC-205ENST00000522348 USP40Q9NVE5 1235 aa11.3□□□□□ -0.6
SPARC-205ENST00000522348 PIM2Q9P1W9 311 aa11.3□□□□□ -0.6
SPARC-205ENST00000522348 CFAP45Q9UL16 551 aa11.3□□□□□ -0.6
SPARC-205ENST00000522348 TNKSO95271 1327 aa11.3□□□□□ -0.6
SPARC-205ENST00000522348 LAMA4Q16363 1823 aa11.3□□□□□ -0.6
SPARC-205ENST00000522348 CCDC88AQ3V6T2 1871 aa11.29□□□□□ -0.6
SPARC-205ENST00000522348 NID2Q14112 1375 aa11.29□□□□□ -0.6
SPARC-205ENST00000522348 MAST2Q6P0Q8 1798 aa11.29□□□□□ -0.6
SPARC-205ENST00000522348 TSPY2A6NKD2 308 aa11.29□□□□□ -0.6
SPARC-205ENST00000522348 F8W031 263 aaPredicted RBP11.29□□□□□ -0.6
SPARC-205ENST00000522348 PPIP5K2O43314 1243 aa11.29□□□□□ -0.6
SPARC-205ENST00000522348 PRDM1O75626 825 aa11.29□□□□□ -0.6
SPARC-205ENST00000522348 CDC27P30260 824 aa11.29□□□□□ -0.6
SPARC-205ENST00000522348 TFAP4Q01664 338 aa11.29□□□□□ -0.6
SPARC-205ENST00000522348 DNM1Q05193 864 aaKnown RBP11.29□□□□□ -0.6
SPARC-205ENST00000522348 NTRK3Q16288 839 aa11.29□□□□□ -0.6
SPARC-205ENST00000522348 RTN1Q16799 776 aa11.29□□□□□ -0.6
SPARC-205ENST00000522348 DACT2Q5SW24 774 aa11.29□□□□□ -0.6
SPARC-205ENST00000522348 MICU3Q86XE3 530 aa11.29□□□□□ -0.6
SPARC-205ENST00000522348 TRIM22Q8IYM9 498 aa11.29□□□□□ -0.6
SPARC-205ENST00000522348 ZNF654Q8IZM8 581 aa11.29□□□□□ -0.6
SPARC-205ENST00000522348 ENAHQ8N8S7 591 aaPredicted RBP11.29□□□□□ -0.6
SPARC-205ENST00000522348 FBXO18Q8NFZ0 1043 aa11.29□□□□□ -0.6
SPARC-205ENST00000522348 ZDHHC15Q96MV8 337 aa11.29□□□□□ -0.6
SPARC-205ENST00000522348 ZNF396Q96N95 335 aaPredicted RBP11.29□□□□□ -0.6
SPARC-205ENST00000522348 FHDC1Q9C0D6 1143 aaPredicted RBP11.29□□□□□ -0.6
SPARC-205ENST00000522348 FAM217BQ9NTX9 383 aaPredicted RBP11.29□□□□□ -0.6
SPARC-205ENST00000522348 RBM28Q9NW13 759 aaKnown RBP11.29□□□□□ -0.6
SPARC-205ENST00000522348 TAOK2Q9UL54 1235 aa11.29□□□□□ -0.6
SPARC-205ENST00000522348 CNPY2Q9Y2B0 182 aa11.29□□□□□ -0.6
SPARC-205ENST00000522348 MYH13Q9UKX3 1938 aa11.29□□□□□ -0.6
SPARC-205ENST00000522348 ROBO3Q96MS0 1386 aa11.28□□□□□ -0.6
SPARC-205ENST00000522348 SMIM22K7EJ46 135 aa11.28□□□□□ -0.6
SPARC-205ENST00000522348 DDAH1O94760 285 aa11.28□□□□□ -0.6
SPARC-205ENST00000522348 FMNL1O95466 1100 aaPredicted RBP11.28□□□□□ -0.6
SPARC-205ENST00000522348 DEKP35659 375 aaKnown RBP11.28□□□□□ -0.6
SPARC-205ENST00000522348 CRKP46108 304 aa11.28□□□□□ -0.6
SPARC-205ENST00000522348 PLCD1P51178 756 aa11.28□□□□□ -0.6
SPARC-205ENST00000522348 UBE2HP62256 183 aa11.28□□□□□ -0.6
SPARC-205ENST00000522348 RESTQ13127 1097 aa11.28□□□□□ -0.6
SPARC-205ENST00000522348 AOC3Q16853 763 aa11.28□□□□□ -0.6
SPARC-205ENST00000522348 APOBEC3HQ6NTF7 200 aaKnown RBP11.28□□□□□ -0.6
SPARC-205ENST00000522348 C16orf86Q6ZW13 317 aa11.28□□□□□ -0.6
SPARC-205ENST00000522348 FERMT3Q86UX7 667 aa11.28□□□□□ -0.6
SPARC-205ENST00000522348 RAB11FIP4Q86YS3 637 aa11.28□□□□□ -0.6
SPARC-205ENST00000522348 CHAMP1Q96JM3 812 aa11.28□□□□□ -0.6
SPARC-205ENST00000522348 MAP3K14Q99558 947 aa11.28□□□□□ -0.6
SPARC-205ENST00000522348 SGIP1Q9BQI5 828 aa11.28□□□□□ -0.6
SPARC-205ENST00000522348 GZF1Q9H116 711 aaPredicted RBP11.28□□□□□ -0.6
SPARC-205ENST00000522348 KCNQ5Q9NR82 932 aa11.28□□□□□ -0.6
SPARC-205ENST00000522348 SERPINA10Q9UK55 444 aa11.28□□□□□ -0.6
SPARC-205ENST00000522348 ISY1Q9ULR0 285 aaKnown RBP11.28□□□□□ -0.6
SPARC-205ENST00000522348 FLT1P17948 1338 aa11.28□□□□□ -0.6
SPARC-205ENST00000522348 STK36Q9NRP7 1315 aa11.28□□□□□ -0.6
SPARC-205ENST00000522348 COL11A2P13942 1736 aaPredicted RBP11.27□□□□□ -0.61
SPARC-205ENST00000522348 KIAA1551Q9HCM1 1747 aa11.27□□□□□ -0.61
SPARC-205ENST00000522348 NPM3O75607 178 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms