RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 PCDHGA10Q9Y5H3 936 aa11.42□□□□□ -0.58
TRAPPC9-212ENST00000521944 PI4KAP2A4QPH2 592 aa11.41□□□□□ -0.58
TRAPPC9-212ENST00000521944 NEURL1BA8MQ27 555 aa11.41□□□□□ -0.58
TRAPPC9-212ENST00000521944 ELL2O00472 640 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC9-212ENST00000521944 LMOD3Q0VAK6 560 aa11.41□□□□□ -0.58
TRAPPC9-212ENST00000521944 TJAP1Q5JTD0 557 aa11.41□□□□□ -0.58
TRAPPC9-212ENST00000521944 FAM83AQ86UY5 434 aa11.41□□□□□ -0.58
TRAPPC9-212ENST00000521944 PI4KAP1Q8N8J0 262 aa11.41□□□□□ -0.58
TRAPPC9-212ENST00000521944 DDX12PQ92771 950 aa11.41□□□□□ -0.58
TRAPPC9-212ENST00000521944 MUC6Q6W4X9 2439 aa11.41□□□□□ -0.58
TRAPPC9-212ENST00000521944 A0A1B0GUL6 1792 aa11.41□□□□□ -0.58
TRAPPC9-212ENST00000521944 TMEM265A0A087WTH1 108 aa11.4□□□□□ -0.58
TRAPPC9-212ENST00000521944 CXCL11O14625 94 aa11.4□□□□□ -0.58
TRAPPC9-212ENST00000521944 HMGCRP04035 888 aa11.4□□□□□ -0.58
TRAPPC9-212ENST00000521944 ZNF853P0CG23 659 aa11.4□□□□□ -0.58
TRAPPC9-212ENST00000521944 PTPREP23469 700 aa11.4□□□□□ -0.58
TRAPPC9-212ENST00000521944 KSR2Q6VAB6 950 aa11.4□□□□□ -0.58
TRAPPC9-212ENST00000521944 ZNF341Q9BYN7 854 aa11.4□□□□□ -0.58
TRAPPC9-212ENST00000521944 A0A0G2JLL6 359 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC9-212ENST00000521944 GYG1P46976 350 aa11.39□□□□□ -0.59
TRAPPC9-212ENST00000521944 SHHQ15465 462 aa11.39□□□□□ -0.59
TRAPPC9-212ENST00000521944 NOL9Q5SY16 702 aaKnown RBP11.39□□□□□ -0.59
TRAPPC9-212ENST00000521944 C9orf50Q5SZB4 431 aa11.39□□□□□ -0.59
TRAPPC9-212ENST00000521944 MAP3K21Q5TCX8 1036 aa11.39□□□□□ -0.59
TRAPPC9-212ENST00000521944 FKBP1CQ5VVH2 108 aa11.39□□□□□ -0.59
TRAPPC9-212ENST00000521944 PRRT2Q7Z6L0 340 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC9-212ENST00000521944 FAM84BQ96KN1 310 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC9-212ENST00000521944 HMX1Q9NP08 348 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC9-212ENST00000521944 XIRP2A4UGR9 3374 aa11.38□□□□□ -0.59
TRAPPC9-212ENST00000521944 HDLBPQ00341 1268 aaKnown RBP11.38□□□□□ -0.59
TRAPPC9-212ENST00000521944 NBR1Q14596 966 aa11.38□□□□□ -0.59
TRAPPC9-212ENST00000521944 DCAF15Q66K64 600 aa11.38□□□□□ -0.59
TRAPPC9-212ENST00000521944 ANKRD13CQ8N6S4 541 aa11.38□□□□□ -0.59
TRAPPC9-212ENST00000521944 C8orf58Q8NAV2 365 aa11.38□□□□□ -0.59
TRAPPC9-212ENST00000521944 TRIB2Q92519 343 aa11.38□□□□□ -0.59
TRAPPC9-212ENST00000521944 ZDHHC15Q96MV8 337 aa11.38□□□□□ -0.59
TRAPPC9-212ENST00000521944 PCGF6Q9BYE7 350 aa11.38□□□□□ -0.59
TRAPPC9-212ENST00000521944 MYO9BQ13459 2157 aa11.38□□□□□ -0.59
TRAPPC9-212ENST00000521944 RPAP1Q9BWH6 1393 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC9-212ENST00000521944 SYNGAP1Q96PV0 1343 aa11.37□□□□□ -0.59
TRAPPC9-212ENST00000521944 GRXCR2A6NFK2 248 aa11.37□□□□□ -0.59
TRAPPC9-212ENST00000521944 PHF20L1A8MW92 1017 aa11.37□□□□□ -0.59
TRAPPC9-212ENST00000521944 FOSL2P15408 326 aa11.37□□□□□ -0.59
TRAPPC9-212ENST00000521944 FOXO4P98177 505 aa11.37□□□□□ -0.59
TRAPPC9-212ENST00000521944 GCKRQ14397 625 aa11.37□□□□□ -0.59
TRAPPC9-212ENST00000521944 CCDC146Q8IYE0 955 aa11.37□□□□□ -0.59
TRAPPC9-212ENST00000521944 COA7Q96BR5 231 aa11.37□□□□□ -0.59
TRAPPC9-212ENST00000521944 ZNF594Q96JF6 807 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC9-212ENST00000521944 KCNK17Q96T54 332 aa11.37□□□□□ -0.59
TRAPPC9-212ENST00000521944 KRTAP3-3Q9BYR6 98 aa11.37□□□□□ -0.59
TRAPPC9-212ENST00000521944 KRTAP3-2Q9BYR7 98 aa11.37□□□□□ -0.59
TRAPPC9-212ENST00000521944 SLC45A1Q9Y2W3 748 aa11.37□□□□□ -0.59
TRAPPC9-212ENST00000521944 AFG3L2Q9Y4W6 797 aa11.37□□□□□ -0.59
TRAPPC9-212ENST00000521944 ZHX2Q9Y6X8 837 aa11.37□□□□□ -0.59
TRAPPC9-212ENST00000521944 CHD9Q3L8U1 2897 aa11.37□□□□□ -0.59
TRAPPC9-212ENST00000521944 ANKRD18BA2A2Z9 1011 aa11.36□□□□□ -0.59
TRAPPC9-212ENST00000521944 PLIN1O60240 522 aa11.36□□□□□ -0.59
TRAPPC9-212ENST00000521944 DDX58O95786 925 aaKnown RBP11.36□□□□□ -0.59
TRAPPC9-212ENST00000521944 SLURP2P0DP57 97 aa11.36□□□□□ -0.59
TRAPPC9-212ENST00000521944 HIBADHP31937 336 aaKnown RBP11.36□□□□□ -0.59
TRAPPC9-212ENST00000521944 LSM11P83369 360 aaKnown RBP eCLIP11.36□□□□□ -0.59
TRAPPC9-212ENST00000521944 G2E3Q7L622 706 aa11.36□□□□□ -0.59
TRAPPC9-212ENST00000521944 FASTKD5Q7L8L6 764 aaKnown RBP11.36□□□□□ -0.59
TRAPPC9-212ENST00000521944 ZFPM1Q8IX07 1006 aa11.36□□□□□ -0.59
TRAPPC9-212ENST00000521944 HOOK2Q96ED9 719 aa11.36□□□□□ -0.59
TRAPPC9-212ENST00000521944 MRIQ9BWK5 157 aa11.36□□□□□ -0.59
TRAPPC9-212ENST00000521944 ADAM33Q9BZ11 813 aa11.36□□□□□ -0.59
TRAPPC9-212ENST00000521944 PLXNB2O15031 1838 aa11.36□□□□□ -0.59
TRAPPC9-212ENST00000521944 REV3LO60673 3130 aa11.35□□□□□ -0.59
TRAPPC9-212ENST00000521944 PTPRAP18433 802 aa11.35□□□□□ -0.59
TRAPPC9-212ENST00000521944 NFIAQ12857 509 aa11.35□□□□□ -0.59
TRAPPC9-212ENST00000521944 GRIN2CQ14957 1233 aa11.35□□□□□ -0.59
TRAPPC9-212ENST00000521944 FBXO33Q7Z6M2 555 aa11.35□□□□□ -0.59
TRAPPC9-212ENST00000521944 TSPYL6Q8N831 410 aa11.35□□□□□ -0.59
TRAPPC9-212ENST00000521944 FAM151AQ8WW52 585 aa11.35□□□□□ -0.59
TRAPPC9-212ENST00000521944 TEKT1Q969V4 418 aa11.35□□□□□ -0.59
TRAPPC9-212ENST00000521944 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC9-212ENST00000521944 IQSEC3Q9UPP2 1182 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC9-212ENST00000521944 ATRNL1Q5VV63 1379 aa11.35□□□□□ -0.59
TRAPPC9-212ENST00000521944 PTPRFP10586 1907 aa11.35□□□□□ -0.59
TRAPPC9-212ENST00000521944 SMAD3P84022 425 aaKnown RBP11.34□□□□□ -0.59
TRAPPC9-212ENST00000521944 TCP10Q12799 353 aa11.34□□□□□ -0.59
TRAPPC9-212ENST00000521944 TRIM26Q12899 539 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC9-212ENST00000521944 FAM110CQ1W6H9 321 aa11.34□□□□□ -0.59
TRAPPC9-212ENST00000521944 EPHA10Q5JZY3 1008 aa11.34□□□□□ -0.59
TRAPPC9-212ENST00000521944 TREML2Q5T2D2 321 aa11.34□□□□□ -0.59
TRAPPC9-212ENST00000521944 SMYD5Q6GMV2 418 aa11.34□□□□□ -0.59
TRAPPC9-212ENST00000521944 GADL1Q6ZQY3 521 aa11.34□□□□□ -0.59
TRAPPC9-212ENST00000521944 SMCR8Q8TEV9 937 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC9-212ENST00000521944 LBHD1Q9BQE6 289 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC9-212ENST00000521944 FAM198AQ9UFP1 575 aa11.34□□□□□ -0.59
TRAPPC9-212ENST00000521944 LTBP2Q14767 1821 aa11.33□□□□□ -0.6
TRAPPC9-212ENST00000521944 MAP3K7O43318 606 aa11.33□□□□□ -0.6
TRAPPC9-212ENST00000521944 CCND3P30281 292 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC9-212ENST00000521944 CACNB2Q08289 660 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC9-212ENST00000521944 IFIT5Q13325 482 aaKnown RBP11.33□□□□□ -0.6
TRAPPC9-212ENST00000521944 CCDC84Q86UT8 332 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC9-212ENST00000521944 CHD7Q9P2D1 2997 aa11.32□□□□□ -0.6
TRAPPC9-212ENST00000521944 PEX10O60683 326 aa11.32□□□□□ -0.6
TRAPPC9-212ENST00000521944 CYP2B6P20813 491 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms