RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 AACSQ86V21 672 aa10.23□□□□□ -0.77
VPS13B-210ENST00000521932 VPS37DQ86XT2 251 aa10.23□□□□□ -0.77
VPS13B-210ENST00000521932 ZNF512BQ96KM6 892 aaPredicted RBP10.23□□□□□ -0.77
VPS13B-210ENST00000521932 CCDC8Q9H0W5 538 aaPredicted RBP10.23□□□□□ -0.77
VPS13B-210ENST00000521932 UNC93B1Q9H1C4 597 aa10.23□□□□□ -0.77
VPS13B-210ENST00000521932 GOPCQ9HD26 462 aa10.23□□□□□ -0.77
VPS13B-210ENST00000521932 KCNQ5Q9NR82 932 aa10.23□□□□□ -0.77
VPS13B-210ENST00000521932 AAASQ9NRG9 546 aa10.23□□□□□ -0.77
VPS13B-210ENST00000521932 DBNLQ9UJU6 430 aaKnown RBP10.23□□□□□ -0.77
VPS13B-210ENST00000521932 KDM2BQ8NHM5 1336 aa10.23□□□□□ -0.77
VPS13B-210ENST00000521932 DICER1Q9UPY3 1922 aaKnown RBP10.23□□□□□ -0.77
VPS13B-210ENST00000521932 AVPP01185 164 aa10.22□□□□□ -0.77
VPS13B-210ENST00000521932 VIL1P09327 827 aaKnown RBP10.22□□□□□ -0.77
VPS13B-210ENST00000521932 ARID4AP29374 1257 aaPredicted RBP10.22□□□□□ -0.77
VPS13B-210ENST00000521932 SH3BP2P78314 561 aa10.22□□□□□ -0.77
VPS13B-210ENST00000521932 CXCL9Q07325 125 aa10.22□□□□□ -0.77
VPS13B-210ENST00000521932 KCNH2Q12809 1159 aa10.22□□□□□ -0.77
VPS13B-210ENST00000521932 TUSC1Q2TAM9 212 aa10.22□□□□□ -0.77
VPS13B-210ENST00000521932 CCDC158Q5M9N0 1113 aa10.22□□□□□ -0.77
VPS13B-210ENST00000521932 STRIP1Q5VSL9 837 aa10.22□□□□□ -0.77
VPS13B-210ENST00000521932 ZNF787Q6DD87 383 aa10.22□□□□□ -0.77
VPS13B-210ENST00000521932 DBNDD2Q9BQY9 259 aa10.22□□□□□ -0.77
VPS13B-210ENST00000521932 GNL3LQ9NVN8 582 aaKnown RBP10.22□□□□□ -0.77
VPS13B-210ENST00000521932 PPP4R2Q9NY27 417 aa10.22□□□□□ -0.77
VPS13B-210ENST00000521932 TLR7Q9NYK1 1049 aaKnown RBP10.22□□□□□ -0.77
VPS13B-210ENST00000521932 CCDC88AQ3V6T2 1871 aa10.21□□□□□ -0.77
VPS13B-210ENST00000521932 TTC24A2A3L6 582 aaPredicted RBP10.21□□□□□ -0.77
VPS13B-210ENST00000521932 USP17L3A6NCW0 530 aa10.21□□□□□ -0.77
VPS13B-210ENST00000521932 USP17L4A6NCW7 530 aa10.21□□□□□ -0.77
VPS13B-210ENST00000521932 GLTPD2A6NH11 291 aa10.21□□□□□ -0.77
VPS13B-210ENST00000521932 IFIT2P09913 472 aaKnown RBP10.21□□□□□ -0.77
VPS13B-210ENST00000521932 PHKA1P46020 1223 aa10.21□□□□□ -0.77
VPS13B-210ENST00000521932 CLK2P49760 499 aaKnown RBP10.21□□□□□ -0.77
VPS13B-210ENST00000521932 EIF6P56537 245 aaKnown RBP10.21□□□□□ -0.77
VPS13B-210ENST00000521932 FKBP1AP62942 108 aaKnown RBP10.21□□□□□ -0.77
VPS13B-210ENST00000521932 TNIP1Q15025 636 aa10.21□□□□□ -0.77
VPS13B-210ENST00000521932 GORABQ5T7V8 394 aa10.21□□□□□ -0.77
VPS13B-210ENST00000521932 TTLL5Q6EMB2 1281 aa10.21□□□□□ -0.77
VPS13B-210ENST00000521932 CIAPIN1Q6FI81 312 aa10.21□□□□□ -0.77
VPS13B-210ENST00000521932 CENPQQ7L2Z9 268 aaPredicted RBP10.21□□□□□ -0.77
VPS13B-210ENST00000521932 USP17L1Q7RTZ2 530 aa10.21□□□□□ -0.77
VPS13B-210ENST00000521932 CHD1LQ86WJ1 897 aa10.21□□□□□ -0.77
VPS13B-210ENST00000521932 C16orf71Q8IYS4 520 aaPredicted RBP10.21□□□□□ -0.77
VPS13B-210ENST00000521932 GPC2Q8N158 579 aa10.21□□□□□ -0.77
VPS13B-210ENST00000521932 SNIP1Q8TAD8 396 aaKnown RBP10.21□□□□□ -0.77
VPS13B-210ENST00000521932 CCDC136Q96JN2 1154 aa10.21□□□□□ -0.77
VPS13B-210ENST00000521932 POLR3EQ9NVU0 708 aa10.21□□□□□ -0.77
VPS13B-210ENST00000521932 DACH1Q9UI36 760 aa10.21□□□□□ -0.77
VPS13B-210ENST00000521932 FAM205AQ6ZU69 1335 aa10.21□□□□□ -0.78
VPS13B-210ENST00000521932 PSMD14O00487 310 aa10.2□□□□□ -0.78
VPS13B-210ENST00000521932 RAD17O75943 681 aa10.2□□□□□ -0.78
VPS13B-210ENST00000521932 F12P00748 615 aaPredicted RBP10.2□□□□□ -0.78
VPS13B-210ENST00000521932 UQCRFS1P1P0C7P4 283 aa10.2□□□□□ -0.78
VPS13B-210ENST00000521932 GTF2IP78347 998 aa10.2□□□□□ -0.78
VPS13B-210ENST00000521932 PDS5AQ29RF7 1337 aaKnown RBP10.2□□□□□ -0.78
VPS13B-210ENST00000521932 LINC01559Q495D7 138 aa10.2□□□□□ -0.78
VPS13B-210ENST00000521932 DACT2Q5SW24 774 aa10.2□□□□□ -0.78
VPS13B-210ENST00000521932 B4GALNT3Q6L9W6 998 aa10.2□□□□□ -0.78
VPS13B-210ENST00000521932 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.2□□□□□ -0.78
VPS13B-210ENST00000521932 ARAP2Q8WZ64 1704 aa10.2□□□□□ -0.78
VPS13B-210ENST00000521932 SALL3Q9BXA9 1300 aa10.2□□□□□ -0.78
VPS13B-210ENST00000521932 MAP10Q9P2G4 905 aa10.2□□□□□ -0.78
VPS13B-210ENST00000521932 DENND2AQ9ULE3 1009 aa10.2□□□□□ -0.78
VPS13B-210ENST00000521932 CHD4Q14839 1912 aa10.19□□□□□ -0.78
VPS13B-210ENST00000521932 ZNF541Q9H0D2 1346 aa10.19□□□□□ -0.78
VPS13B-210ENST00000521932 SIAH2O43255 324 aa10.19□□□□□ -0.78
VPS13B-210ENST00000521932 FRAT2O75474 233 aaPredicted RBP10.19□□□□□ -0.78
VPS13B-210ENST00000521932 DDNO94850 711 aaPredicted RBP10.19□□□□□ -0.78
VPS13B-210ENST00000521932 ATP5JP18859 108 aa10.19□□□□□ -0.78
VPS13B-210ENST00000521932 RPS12P25398 132 aaKnown RBP10.19□□□□□ -0.78
VPS13B-210ENST00000521932 MCAMP43121 646 aa10.19□□□□□ -0.78
VPS13B-210ENST00000521932 RASGRF1Q13972 1273 aa10.19□□□□□ -0.78
VPS13B-210ENST00000521932 TTC39AQ5SRH9 613 aa10.19□□□□□ -0.78
VPS13B-210ENST00000521932 CRIPAKQ8N1N5 446 aa10.19□□□□□ -0.78
VPS13B-210ENST00000521932 AGBL3Q8NEM8 1001 aa10.19□□□□□ -0.78
VPS13B-210ENST00000521932 WDR66Q8TBY9 1149 aa10.19□□□□□ -0.78
VPS13B-210ENST00000521932 BAP1Q92560 729 aa10.19□□□□□ -0.78
VPS13B-210ENST00000521932 DPF2Q92785 391 aa10.19□□□□□ -0.78
VPS13B-210ENST00000521932 GMLQ99445 158 aa10.19□□□□□ -0.78
VPS13B-210ENST00000521932 HMG20BQ9P0W2 317 aa10.19□□□□□ -0.78
VPS13B-210ENST00000521932 TTC41PQ6P2S7 1318 aa10.18□□□□□ -0.78
VPS13B-210ENST00000521932 MYO3BQ8WXR4 1341 aa10.18□□□□□ -0.78
VPS13B-210ENST00000521932 SALL1Q9NSC2 1324 aa10.18□□□□□ -0.78
VPS13B-210ENST00000521932 MMP14P50281 582 aa10.18□□□□□ -0.78
VPS13B-210ENST00000521932 SCARF1Q14162 830 aa10.18□□□□□ -0.78
VPS13B-210ENST00000521932 SPATA5Q8NB90 893 aa10.18□□□□□ -0.78
VPS13B-210ENST00000521932 TBC1D22AQ8WUA7 517 aa10.18□□□□□ -0.78
VPS13B-210ENST00000521932 LNPKQ9C0E8 428 aa10.18□□□□□ -0.78
VPS13B-210ENST00000521932 OSBPL3Q9H4L5 887 aa10.18□□□□□ -0.78
VPS13B-210ENST00000521932 ECHDC1Q9NTX5 307 aa10.18□□□□□ -0.78
VPS13B-210ENST00000521932 STAP2Q9UGK3 403 aa10.18□□□□□ -0.78
VPS13B-210ENST00000521932 IQSEC3Q9UPP2 1182 aaPredicted RBP10.18□□□□□ -0.78
VPS13B-210ENST00000521932 SUGT1Q9Y2Z0 365 aa10.18□□□□□ -0.78
VPS13B-210ENST00000521932 SCN9AQ15858 1988 aa10.17□□□□□ -0.78
VPS13B-210ENST00000521932 TIAM2Q8IVF5 1701 aa10.17□□□□□ -0.78
VPS13B-210ENST00000521932 IGSF3O75054 1194 aa10.17□□□□□ -0.78
VPS13B-210ENST00000521932 MX1P20591 662 aa10.17□□□□□ -0.78
VPS13B-210ENST00000521932 SCNN1DP51172 638 aa10.17□□□□□ -0.78
VPS13B-210ENST00000521932 MFSD14BQ5SR56 506 aa10.17□□□□□ -0.78
VPS13B-210ENST00000521932 CERS5Q8N5B7 392 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms