RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 MYRIPQ8NFW9 859 aa18.2■□□□□ 0.5
USP42-207ENST00000521713 FERMT1Q9BQL6 677 aa18.2■□□□□ 0.5
USP42-207ENST00000521713 BIN2Q9UBW5 565 aaPredicted RBP18.2■□□□□ 0.5
USP42-207ENST00000521713 CSADQ9Y600 493 aa18.2■□□□□ 0.5
USP42-207ENST00000521713 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.2■□□□□ 0.5
USP42-207ENST00000521713 AS3MTQ9HBK9 375 aa18.2■□□□□ 0.5
USP42-207ENST00000521713 HEG1Q9ULI3 1381 aa18.2■□□□□ 0.5
USP42-207ENST00000521713 TMCO5BA8MYB1 307 aa18.2■□□□□ 0.5
USP42-207ENST00000521713 CYLC1P35663 651 aaPredicted RBP18.2■□□□□ 0.5
USP42-207ENST00000521713 ZYXQ15942 572 aaKnown RBP18.2■□□□□ 0.5
USP42-207ENST00000521713 KRT25Q7Z3Z0 450 aa18.2■□□□□ 0.5
USP42-207ENST00000521713 CCDC65Q8IXS2 484 aa18.2■□□□□ 0.5
USP42-207ENST00000521713 MICALL1Q8N3F8 863 aa18.2■□□□□ 0.5
USP42-207ENST00000521713 ARFGAP2Q8N6H7 521 aa18.2■□□□□ 0.5
USP42-207ENST00000521713 TM6SF1Q9BZW5 370 aa18.2■□□□□ 0.5
USP42-207ENST00000521713 CTNNBL1Q8WYA6 563 aaPredicted RBP18.2■□□□□ 0.5
USP42-207ENST00000521713 PLVAPQ9BX97 442 aa18.2■□□□□ 0.5
USP42-207ENST00000521713 GREM2Q9H772 168 aa18.2■□□□□ 0.5
USP42-207ENST00000521713 CTDSPL2Q05D32 466 aa18.19■□□□□ 0.5
USP42-207ENST00000521713 CHURC1Q8WUH1 139 aa18.19■□□□□ 0.5
USP42-207ENST00000521713 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.19■□□□□ 0.5
USP42-207ENST00000521713 KIF4AO95239 1232 aa18.19■□□□□ 0.5
USP42-207ENST00000521713 RPL13P26373 211 aaKnown RBP18.19■□□□□ 0.5
USP42-207ENST00000521713 SV2BQ7L1I2 683 aa18.19■□□□□ 0.5
USP42-207ENST00000521713 DHX37Q8IY37 1157 aaKnown RBP18.19■□□□□ 0.5
USP42-207ENST00000521713 NDUFB9Q9Y6M9 179 aa18.19■□□□□ 0.5
USP42-207ENST00000521713 A6NNZ2 444 aa18.19■□□□□ 0.5
USP42-207ENST00000521713 STAMBPO95630 424 aa18.19■□□□□ 0.5
USP42-207ENST00000521713 PDE6AP16499 860 aa18.19■□□□□ 0.5
USP42-207ENST00000521713 PPARAQ07869 468 aa18.19■□□□□ 0.5
USP42-207ENST00000521713 MCM6Q14566 821 aa18.19■□□□□ 0.5
USP42-207ENST00000521713 TUBB8Q3ZCM7 444 aa18.19■□□□□ 0.5
USP42-207ENST00000521713 HAUS7Q99871 368 aa18.19■□□□□ 0.5
USP42-207ENST00000521713 ZBTB21Q9ULJ3 1066 aa18.19■□□□□ 0.5
USP42-207ENST00000521713 USP17L12C9JPN9 530 aa18.18■□□□□ 0.5
USP42-207ENST00000521713 USP17L21D6R901 530 aa18.18■□□□□ 0.5
USP42-207ENST00000521713 ADCY7P51828 1080 aa18.18■□□□□ 0.5
USP42-207ENST00000521713 HOOK3Q86VS8 718 aa18.18■□□□□ 0.5
USP42-207ENST00000521713 BCAMP50895 628 aa18.18■□□□□ 0.5
USP42-207ENST00000521713 SP4Q02446 784 aa18.18■□□□□ 0.5
USP42-207ENST00000521713 ZNF174Q15697 407 aa18.18■□□□□ 0.5
USP42-207ENST00000521713 ARHGAP27Q6ZUM4 889 aa18.18■□□□□ 0.5
USP42-207ENST00000521713 NONOQ15233 471 aaKnown RBP eCLIP18.18■□□□□ 0.5
USP42-207ENST00000521713 DIS3L2Q8IYB7 885 aaKnown RBP18.18■□□□□ 0.5
USP42-207ENST00000521713 SYNCQ9H7C4 482 aa18.18■□□□□ 0.5
USP42-207ENST00000521713 GSTTP1A0A1W2PQM5 241 aa18.18■□□□□ 0.5
USP42-207ENST00000521713 VWA3AA6NCI4 1184 aa18.18■□□□□ 0.5
USP42-207ENST00000521713 PROSER3Q2NL68 480 aa18.18■□□□□ 0.5
USP42-207ENST00000521713 OTUD6BQ8N6M0 293 aa18.18■□□□□ 0.5
USP42-207ENST00000521713 PIGBQ92521 554 aa18.18■□□□□ 0.5
USP42-207ENST00000521713 BEGAINQ9BUH8 593 aa18.17■□□□□ 0.5
USP42-207ENST00000521713 JADE2Q9NQC1 790 aa18.17■□□□□ 0.5
USP42-207ENST00000521713 PPEF1O14829 653 aaPredicted RBP18.17■□□□□ 0.5
USP42-207ENST00000521713 LRRC24Q50LG9 513 aa18.17■□□□□ 0.5
USP42-207ENST00000521713 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.17■□□□□ 0.5
USP42-207ENST00000521713 CTAGE9A4FU28 777 aa18.17■□□□□ 0.5
USP42-207ENST00000521713 TYRO3Q06418 890 aa18.17■□□□□ 0.5
USP42-207ENST00000521713 ANKS4BQ8N8V4 417 aa18.17■□□□□ 0.5
USP42-207ENST00000521713 ATG3Q9NT62 314 aa18.17■□□□□ 0.5
USP42-207ENST00000521713 ELP1O95163 1332 aa18.17■□□□□ 0.5
USP42-207ENST00000521713 DNA2P51530 1060 aa18.16■□□□□ 0.5
USP42-207ENST00000521713 TUBB2AQ13885 445 aa18.16■□□□□ 0.5
USP42-207ENST00000521713 CC2D2BQ6DHV5 1058 aa18.16■□□□□ 0.5
USP42-207ENST00000521713 TUBB2BQ9BVA1 445 aa18.16■□□□□ 0.5
USP42-207ENST00000521713 PNMA2Q9UL42 364 aa18.16■□□□□ 0.5
USP42-207ENST00000521713 IQGAP3Q86VI3 1631 aa18.16■□□□□ 0.5
USP42-207ENST00000521713 PRKG1Q13976 671 aa18.16■□□□□ 0.5
USP42-207ENST00000521713 PIK3AP1Q6ZUJ8 805 aa18.16■□□□□ 0.5
USP42-207ENST00000521713 KIAA0825Q8IV33 1275 aa18.16■□□□□ 0.5
USP42-207ENST00000521713 STMN4Q9H169 189 aaPredicted RBP18.16■□□□□ 0.5
USP42-207ENST00000521713 GPHNQ9NQX3 736 aaPredicted RBP18.16■□□□□ 0.5
USP42-207ENST00000521713 CCT6AP40227 531 aaKnown RBP18.16■□□□□ 0.5
USP42-207ENST00000521713 CCDC121Q6ZUS5 278 aa18.16■□□□□ 0.5
USP42-207ENST00000521713 ZNF445P59923 1031 aa18.16■□□□□ 0.5
USP42-207ENST00000521713 UBE3CQ15386 1083 aa18.16■□□□□ 0.5
USP42-207ENST00000521713 DOK7Q18PE1 504 aa18.16■□□□□ 0.5
USP42-207ENST00000521713 CPXCR1Q8N123 301 aa18.16■□□□□ 0.5
USP42-207ENST00000521713 CCDC155Q8N6L0 562 aa18.16■□□□□ 0.5
USP42-207ENST00000521713 E7EWF7 191 aa18.15■□□□□ 0.5
USP42-207ENST00000521713 EAPPQ56P03 285 aaPredicted RBP18.15■□□□□ 0.5
USP42-207ENST00000521713 HDXQ7Z353 690 aa18.15■□□□□ 0.5
USP42-207ENST00000521713 KDM2BQ8NHM5 1336 aa18.15■□□□□ 0.5
USP42-207ENST00000521713 ANO1Q5XXA6 986 aa18.15■□□□□ 0.5
USP42-207ENST00000521713 NSMFQ6X4W1 530 aa18.15■□□□□ 0.5
USP42-207ENST00000521713 FMNL3Q8IVF7 1028 aa18.15■□□□□ 0.5
USP42-207ENST00000521713 PALLDQ8WX93 1383 aa18.15■□□□□ 0.5
USP42-207ENST00000521713 PCP11498 1178 aaKnown RBP18.15■□□□□ 0.5
USP42-207ENST00000521713 MCTP2Q6DN12 878 aa18.15■□□□□ 0.5
USP42-207ENST00000521713 GBP6Q6ZN66 633 aa18.15■□□□□ 0.5
USP42-207ENST00000521713 IFNL3Q8IZI9 196 aa18.15■□□□□ 0.5
USP42-207ENST00000521713 ACTN2P35609 894 aa18.15■□□□□ 0.5
USP42-207ENST00000521713 SMTNP53814 917 aa18.15■□□□□ 0.5
USP42-207ENST00000521713 AOPEPQ8N6M6 819 aa18.15■□□□□ 0.5
USP42-207ENST00000521713 CLEC4GQ6UXB4 293 aa18.14■□□□□ 0.5
USP42-207ENST00000521713 FAM182BQ5T319 152 aa18.14■□□□□ 0.49
USP42-207ENST00000521713 NLRP10Q86W26 655 aa18.14■□□□□ 0.49
USP42-207ENST00000521713 DNAJC25Q9H1X3 360 aa18.14■□□□□ 0.49
USP42-207ENST00000521713 ZSWIM4Q9H7M6 989 aa18.14■□□□□ 0.49
USP42-207ENST00000521713 NCOA5Q9HCD5 579 aaKnown RBP18.14■□□□□ 0.49
USP42-207ENST00000521713 NOP56O00567 594 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms