RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 RRP1BQ14684 758 aaKnown RBP10.08□□□□□ -0.8
CSMD1-209ENST00000520630 SHHQ15465 462 aa10.08□□□□□ -0.8
CSMD1-209ENST00000520630 ZNF697Q5TEC3 545 aa10.08□□□□□ -0.8
CSMD1-209ENST00000520630 KLHDC4Q8TBB5 520 aa10.08□□□□□ -0.8
CSMD1-209ENST00000520630 SMCR8Q8TEV9 937 aaPredicted RBP10.08□□□□□ -0.8
CSMD1-209ENST00000520630 USP6NLQ92738 828 aa10.08□□□□□ -0.8
CSMD1-209ENST00000520630 DDX4Q9NQI0 724 aaKnown RBP10.08□□□□□ -0.8
CSMD1-209ENST00000520630 MCM3APO60318 1980 aa10.08□□□□□ -0.8
CSMD1-209ENST00000520630 MROH5Q6ZUA9 1318 aa10.07□□□□□ -0.8
CSMD1-209ENST00000520630 VAMP4O75379 141 aa10.07□□□□□ -0.8
CSMD1-209ENST00000520630 PDE8BO95263 885 aa10.07□□□□□ -0.8
CSMD1-209ENST00000520630 CYP2B6P20813 491 aa10.07□□□□□ -0.8
CSMD1-209ENST00000520630 PLA2G5P39877 138 aa10.07□□□□□ -0.8
CSMD1-209ENST00000520630 CCL14Q16627 93 aa10.07□□□□□ -0.8
CSMD1-209ENST00000520630 TAF7LQ5H9L4 462 aa10.07□□□□□ -0.8
CSMD1-209ENST00000520630 ANKRD44Q8N8A2 993 aa10.07□□□□□ -0.8
CSMD1-209ENST00000520630 TXNRD2Q9NNW7 524 aa10.07□□□□□ -0.8
CSMD1-209ENST00000520630 USP40Q9NVE5 1235 aa10.07□□□□□ -0.8
CSMD1-209ENST00000520630 MAST3O60307 1309 aa10.07□□□□□ -0.8
CSMD1-209ENST00000520630 MYH8P13535 1937 aa10.06□□□□□ -0.8
CSMD1-209ENST00000520630 ZNF236Q9UL36 1845 aa10.06□□□□□ -0.8
CSMD1-209ENST00000520630 FAM196BA6NMK8 535 aa10.06□□□□□ -0.8
CSMD1-209ENST00000520630 TNFRSF10AO00220 468 aa10.06□□□□□ -0.8
CSMD1-209ENST00000520630 NBPF7P0C2Y1 421 aaPredicted RBP10.06□□□□□ -0.8
CSMD1-209ENST00000520630 HOXD11P31277 338 aaPredicted RBP10.06□□□□□ -0.8
CSMD1-209ENST00000520630 RGS3P49796 1198 aa10.06□□□□□ -0.8
CSMD1-209ENST00000520630 CALD1Q05682 793 aaKnown RBP10.06□□□□□ -0.8
CSMD1-209ENST00000520630 IDI2Q9BXS1 227 aa10.06□□□□□ -0.8
CSMD1-209ENST00000520630 CHMP4AQ9BY43 222 aa10.06□□□□□ -0.8
CSMD1-209ENST00000520630 ASCC2Q9H1I8 757 aaPredicted RBP10.06□□□□□ -0.8
CSMD1-209ENST00000520630 MORF4L1Q9UBU8 362 aa10.06□□□□□ -0.8
CSMD1-209ENST00000520630 ZBED9Q6R2W3 1325 aa10.06□□□□□ -0.8
CSMD1-209ENST00000520630 CTNND1O60716 968 aaKnown RBP10.05□□□□□ -0.8
CSMD1-209ENST00000520630 XRCC5P13010 732 aaKnown RBP10.05□□□□□ -0.8
CSMD1-209ENST00000520630 Q3C1V9 767 aa10.05□□□□□ -0.8
CSMD1-209ENST00000520630 RABL6Q3YEC7 729 aaPredicted RBP10.05□□□□□ -0.8
CSMD1-209ENST00000520630 VPS37DQ86XT2 251 aa10.05□□□□□ -0.8
CSMD1-209ENST00000520630 PROCA1Q8NCQ7 364 aaPredicted RBP10.05□□□□□ -0.8
CSMD1-209ENST00000520630 PICK1Q9NRD5 415 aa10.05□□□□□ -0.8
CSMD1-209ENST00000520630 UTYO14607 1347 aa10.05□□□□□ -0.8
CSMD1-209ENST00000520630 KIF16BQ96L93 1317 aa10.05□□□□□ -0.8
CSMD1-209ENST00000520630 A0A0G2JMZ2 1700 aa10.04□□□□□ -0.8
CSMD1-209ENST00000520630 ENTPD3O75355 529 aa10.04□□□□□ -0.8
CSMD1-209ENST00000520630 FRAT2O75474 233 aaPredicted RBP10.04□□□□□ -0.8
CSMD1-209ENST00000520630 GCLCP48506 637 aaPredicted RBP10.04□□□□□ -0.8
CSMD1-209ENST00000520630 JAG1P78504 1218 aa10.04□□□□□ -0.8
CSMD1-209ENST00000520630 SPP2Q13103 211 aa10.04□□□□□ -0.8
CSMD1-209ENST00000520630 CAVIN4Q5BKX8 364 aa10.04□□□□□ -0.8
CSMD1-209ENST00000520630 METTL24Q5JXM2 366 aa10.04□□□□□ -0.8
CSMD1-209ENST00000520630 ZNF384Q8TF68 577 aa10.04□□□□□ -0.8
CSMD1-209ENST00000520630 SYMPKQ92797 1274 aaKnown RBP10.04□□□□□ -0.8
CSMD1-209ENST00000520630 BICC1Q9H694 974 aaKnown RBP10.04□□□□□ -0.8
CSMD1-209ENST00000520630 SPINK5Q9NQ38 1064 aaPredicted RBP10.04□□□□□ -0.8
CSMD1-209ENST00000520630 FLRT1Q9NZU1 646 aa10.04□□□□□ -0.8
CSMD1-209ENST00000520630 WDFY4Q6ZS81 3184 aa10.04□□□□□ -0.8
CSMD1-209ENST00000520630 GAKO14976 1311 aa10.04□□□□□ -0.8
CSMD1-209ENST00000520630 IGHA2P01877 340 aa10.03□□□□□ -0.8
CSMD1-209ENST00000520630 FOSL2P15408 326 aa10.03□□□□□ -0.8
CSMD1-209ENST00000520630 HMGCS2P54868 508 aa10.03□□□□□ -0.8
CSMD1-209ENST00000520630 SH3D19Q5HYK7 790 aa10.03□□□□□ -0.8
CSMD1-209ENST00000520630 TJAP1Q5JTD0 557 aa10.03□□□□□ -0.8
CSMD1-209ENST00000520630 MORN1Q5T089 497 aa10.03□□□□□ -0.8
CSMD1-209ENST00000520630 SH3RF1Q7Z6J0 888 aa10.03□□□□□ -0.8
CSMD1-209ENST00000520630 WWC1Q8IX03 1113 aa10.03□□□□□ -0.8
CSMD1-209ENST00000520630 WDR66Q8TBY9 1149 aa10.03□□□□□ -0.8
CSMD1-209ENST00000520630 P2RX7Q99572 595 aaKnown RBP10.03□□□□□ -0.8
CSMD1-209ENST00000520630 SENP6Q9GZR1 1112 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-209ENST00000520630 PORCNQ9H237 461 aa10.03□□□□□ -0.8
CSMD1-209ENST00000520630 RBPJLQ9UBG7 517 aa10.03□□□□□ -0.8
CSMD1-209ENST00000520630 CENPBP07199 599 aaPredicted RBP10.02□□□□□ -0.81
CSMD1-209ENST00000520630 ITGB8P26012 769 aa10.02□□□□□ -0.81
CSMD1-209ENST00000520630 RFX5P48382 616 aaPredicted RBP10.02□□□□□ -0.81
CSMD1-209ENST00000520630 ATN1P54259 1190 aaPredicted RBP10.02□□□□□ -0.81
CSMD1-209ENST00000520630 EPHB4P54760 987 aa10.02□□□□□ -0.81
CSMD1-209ENST00000520630 RTP1P59025 263 aa10.02□□□□□ -0.81
CSMD1-209ENST00000520630 SMAD3P84022 425 aaKnown RBP10.02□□□□□ -0.81
CSMD1-209ENST00000520630 GRIN2CQ14957 1233 aa10.02□□□□□ -0.81
CSMD1-209ENST00000520630 SHROOM1Q2M3G4 852 aaPredicted RBP10.02□□□□□ -0.81
CSMD1-209ENST00000520630 TRPV1Q8NER1 839 aa10.02□□□□□ -0.81
CSMD1-209ENST00000520630 PNMA3Q9UL41 463 aa10.02□□□□□ -0.81
CSMD1-209ENST00000520630 LRRFIP2Q9Y608 721 aaKnown RBP10.02□□□□□ -0.81
CSMD1-209ENST00000520630 BRWD1Q9NSI6 2320 aa10.02□□□□□ -0.81
CSMD1-209ENST00000520630 SALL1Q9NSC2 1324 aa10.02□□□□□ -0.81
CSMD1-209ENST00000520630 FANCIQ9NVI1 1328 aa10.02□□□□□ -0.81
CSMD1-209ENST00000520630 PRRC2BQ5JSZ5 2229 aaKnown RBP10.02□□□□□ -0.81
CSMD1-209ENST00000520630 PTPRSQ13332 1948 aa10.01□□□□□ -0.81
CSMD1-209ENST00000520630 MUC6Q6W4X9 2439 aa10.01□□□□□ -0.81
CSMD1-209ENST00000520630 TRIM43BA6NCK2 446 aa10.01□□□□□ -0.81
CSMD1-209ENST00000520630 TBC1D12O60347 775 aa10.01□□□□□ -0.81
CSMD1-209ENST00000520630 ALDH1L1O75891 902 aa10.01□□□□□ -0.81
CSMD1-209ENST00000520630 RHBDL3P58872 404 aa10.01□□□□□ -0.81
CSMD1-209ENST00000520630 CCDC27Q2M243 656 aa10.01□□□□□ -0.81
CSMD1-209ENST00000520630 NCBP3Q53F19 620 aaKnown RBP10.01□□□□□ -0.81
CSMD1-209ENST00000520630 ATG9AQ7Z3C6 839 aa10.01□□□□□ -0.81
CSMD1-209ENST00000520630 ZNF280CQ8ND82 737 aa10.01□□□□□ -0.81
CSMD1-209ENST00000520630 BADQ92934 168 aa10.01□□□□□ -0.81
CSMD1-209ENST00000520630 TRIM43Q96BQ3 446 aaPredicted RBP10.01□□□□□ -0.81
CSMD1-209ENST00000520630 LBHD1Q9BQE6 289 aaPredicted RBP10.01□□□□□ -0.81
CSMD1-209ENST00000520630 NUDT12Q9BQG2 462 aa10.01□□□□□ -0.81
CSMD1-209ENST00000520630 C9orf78Q9NZ63 289 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms