RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 TLR7Q9NYK1 1049 aaKnown RBP6.73□□□□□ -1.33
CTNNA1-220ENST00000520260 PI4KBQ9UBF8 816 aa6.73□□□□□ -1.33
CTNNA1-220ENST00000520260 ARPP21Q9UBL0 812 aaPredicted RBP6.73□□□□□ -1.33
CTNNA1-220ENST00000520260 SWAP70Q9UH65 585 aa6.73□□□□□ -1.33
CTNNA1-220ENST00000520260 CTNNA3Q9UI47 895 aa6.73□□□□□ -1.33
CTNNA1-220ENST00000520260 COL4A1P02462 1669 aa6.73□□□□□ -1.33
CTNNA1-220ENST00000520260 RAD50Q92878 1312 aa6.73□□□□□ -1.33
CTNNA1-220ENST00000520260 PASKQ96RG2 1323 aa6.73□□□□□ -1.33
CTNNA1-220ENST00000520260 PAPPA2Q9BXP8 1791 aa6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 ECM29Q5VYK3 1845 aa6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 RNF113AO15541 343 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 SMARCA5O60264 1052 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 APPP05067 770 aa6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 ZBTB48P10074 688 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 PCP11498 1178 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 MAP2K2P36507 400 aa6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 TDO2P48775 406 aa6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 ZNF157P51786 506 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 PDE1AP54750 535 aa6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 PABPC4Q13310 644 aaKnown RBP eCLIP6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 PICALMQ13492 652 aa6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 DIXDC1Q155Q3 683 aa6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 CDC42EP5Q6NZY7 148 aa6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 FOXP4Q8IVH2 680 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 SLC10A4Q96EP9 437 aa6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 ZBED3Q96IU2 234 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 PRMT6Q96LA8 375 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 CABP5Q9NP86 173 aa6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 HELLSQ9NRZ9 838 aa6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 AATFQ9NY61 560 aaKnown RBP eCLIP6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 TLL2Q9Y6L7 1015 aa6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 ZNF532Q9HCE3 1301 aa6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 ADAMTSL1Q8N6G6 1762 aa6.72□□□□□ -1.33
CTNNA1-220ENST00000520260 SCN9AQ15858 1988 aa6.71□□□□□ -1.33
CTNNA1-220ENST00000520260 MANSC4A6NHS7 340 aaPredicted RBP6.71□□□□□ -1.34
CTNNA1-220ENST00000520260 WTIPA6NIX2 430 aaPredicted RBP6.71□□□□□ -1.34
CTNNA1-220ENST00000520260 RASSF10A6NK89 507 aa6.71□□□□□ -1.34
CTNNA1-220ENST00000520260 ADM5C9JUS6 153 aa6.71□□□□□ -1.34
CTNNA1-220ENST00000520260 TBC1D12O60347 775 aa6.71□□□□□ -1.34
CTNNA1-220ENST00000520260 ITGBL1O95965 494 aaPredicted RBP6.71□□□□□ -1.34
CTNNA1-220ENST00000520260 ASNSP08243 561 aa6.71□□□□□ -1.34
CTNNA1-220ENST00000520260 ADD2P35612 726 aa6.71□□□□□ -1.34
CTNNA1-220ENST00000520260 RGS3P49796 1198 aa6.71□□□□□ -1.34
CTNNA1-220ENST00000520260 NUBP1P53384 320 aa6.71□□□□□ -1.34
CTNNA1-220ENST00000520260 HIRAP54198 1017 aaPredicted RBP6.71□□□□□ -1.34
CTNNA1-220ENST00000520260 PDE4BQ07343 736 aa6.71□□□□□ -1.34
CTNNA1-220ENST00000520260 APOBEC3HQ6NTF7 200 aaKnown RBP6.71□□□□□ -1.34
CTNNA1-220ENST00000520260 RGMBQ6NW40 437 aa6.71□□□□□ -1.34
CTNNA1-220ENST00000520260 TBC1D9Q6ZT07 1266 aa6.71□□□□□ -1.34
CTNNA1-220ENST00000520260 PLCD3Q8N3E9 789 aa6.71□□□□□ -1.34
CTNNA1-220ENST00000520260 MXD3Q9BW11 206 aa6.71□□□□□ -1.34
CTNNA1-220ENST00000520260 OSBPL5Q9H0X9 879 aaPredicted RBP6.71□□□□□ -1.34
CTNNA1-220ENST00000520260 EHD4Q9H223 541 aa6.71□□□□□ -1.34
CTNNA1-220ENST00000520260 RNF41Q9H4P4 317 aaPredicted RBP6.71□□□□□ -1.34
CTNNA1-220ENST00000520260 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.71□□□□□ -1.34
CTNNA1-220ENST00000520260 SERPINB13Q9UIV8 391 aa6.71□□□□□ -1.34
CTNNA1-220ENST00000520260 ANGEL1Q9UNK9 670 aaKnown RBP6.71□□□□□ -1.34
CTNNA1-220ENST00000520260 ATRNL1Q5VV63 1379 aa6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 CTNND1O60716 968 aaKnown RBP6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 MBD4O95243 580 aa6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 SLC4A3P48751 1232 aa6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 GTF2A2P52657 109 aa6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 MAP3K9P80192 1104 aa6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 BECN1Q14457 450 aa6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 MAP3K11Q16584 847 aa6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 MCMDC2Q4G0Z9 681 aa6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 GLIPR1L2Q4G1C9 344 aa6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 CCDC178Q5BJE1 867 aa6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 RNF20Q5VTR2 975 aa6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 PI16Q6UXB8 463 aa6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 SAPCD2Q86UD0 394 aa6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 SLC51AQ86UW1 340 aa6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 ERO1BQ86YB8 467 aa6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 CCDC17Q96LX7 622 aa6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 WRNIP1Q96S55 665 aa6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 NAPBQ9H115 298 aa6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 PIH1D3Q9NQM4 214 aaKnown RBP6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 MCM9Q9NXL9 1143 aa6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 PNMA3Q9UL41 463 aa6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 SLC4A4Q9Y6R1 1079 aa6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 FLT1P17948 1338 aa6.7□□□□□ -1.34
CTNNA1-220ENST00000520260 CNTNAP1P78357 1384 aa6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 TRPM7Q96QT4 1865 aa6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 CETPP11597 493 aa6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 MCCP23508 829 aa6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 USP14P54578 494 aa6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 PPATQ06203 517 aa6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 TCP10Q12799 353 aa6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 TRDNQ13061 729 aa6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 GRM1Q13255 1194 aa6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 SNAPC2Q13487 334 aa6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 BMP2KLQ5H9B9 411 aa6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 TTC22Q5TAA0 569 aa6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 FASTKD5Q7L8L6 764 aaKnown RBP6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 MAPKAPK5Q8IW41 473 aa6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 MIGA1Q8NAN2 632 aa6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 PI4K2BQ8TCG2 481 aa6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 SH3RF3Q8TEJ3 882 aaPredicted RBP6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 GTF3C2Q8WUA4 911 aaPredicted RBP6.69□□□□□ -1.34
CTNNA1-220ENST00000520260 TGFBRAP1Q8WUH2 860 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms