RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 ALX1Q15699 326 aa16.94■□□□□ 0.3
VPS37A-206ENST00000520140 BACH2Q9BYV9 841 aa16.94■□□□□ 0.3
VPS37A-206ENST00000520140 U3KPZ7 1027 aaPredicted RBP16.94■□□□□ 0.3
VPS37A-206ENST00000520140 TOMM70O94826 608 aa16.93■□□□□ 0.3
VPS37A-206ENST00000520140 CYP21A2P08686 494 aa16.93■□□□□ 0.3
VPS37A-206ENST00000520140 IMMTQ16891 758 aaKnown RBP16.93■□□□□ 0.3
VPS37A-206ENST00000520140 USP26Q9BXU7 913 aa16.93■□□□□ 0.3
VPS37A-206ENST00000520140 CTNNA3Q9UI47 895 aa16.93■□□□□ 0.3
VPS37A-206ENST00000520140 SERPINB13Q9UIV8 391 aa16.93■□□□□ 0.3
VPS37A-206ENST00000520140 ITGBL1O95965 494 aaPredicted RBP16.93■□□□□ 0.3
VPS37A-206ENST00000520140 SBK1Q52WX2 424 aa16.93■□□□□ 0.3
VPS37A-206ENST00000520140 TRIM34Q9BYJ4 488 aa16.93■□□□□ 0.3
VPS37A-206ENST00000520140 NBPF3Q9H094 633 aa16.93■□□□□ 0.3
VPS37A-206ENST00000520140 DNAJC18Q9H819 358 aa16.93■□□□□ 0.3
VPS37A-206ENST00000520140 PPP2R3BQ9Y5P8 575 aa16.93■□□□□ 0.3
VPS37A-206ENST00000520140 MYH8P13535 1937 aa16.93■□□□□ 0.3
VPS37A-206ENST00000520140 SSC5DA1L4H1 1573 aa16.92■□□□□ 0.3
VPS37A-206ENST00000520140 NECTIN1Q15223 517 aa16.92■□□□□ 0.3
VPS37A-206ENST00000520140 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.92■□□□□ 0.3
VPS37A-206ENST00000520140 TOMM22Q9NS69 142 aa16.92■□□□□ 0.3
VPS37A-206ENST00000520140 LAMA4Q16363 1823 aa16.92■□□□□ 0.3
VPS37A-206ENST00000520140 TTLL12Q14166 644 aaPredicted RBP16.91■□□□□ 0.3
VPS37A-206ENST00000520140 CREB3L3Q68CJ9 461 aa16.91■□□□□ 0.3
VPS37A-206ENST00000520140 MOB2Q70IA6 237 aa16.91■□□□□ 0.3
VPS37A-206ENST00000520140 TBC1D10CQ8IV04 446 aa16.91■□□□□ 0.3
VPS37A-206ENST00000520140 SMC1BQ8NDV3 1235 aa16.91■□□□□ 0.3
VPS37A-206ENST00000520140 TACC3Q9Y6A5 838 aa16.91■□□□□ 0.3
VPS37A-206ENST00000520140 ZMYM6O95789 1325 aa16.91■□□□□ 0.3
VPS37A-206ENST00000520140 SLC27A2O14975 620 aa16.91■□□□□ 0.3
VPS37A-206ENST00000520140 SUPT20HL1Q3ZLR7 823 aa16.91■□□□□ 0.3
VPS37A-206ENST00000520140 RRP12Q5JTH9 1297 aaKnown RBP16.91■□□□□ 0.3
VPS37A-206ENST00000520140 COL2A1P02458 1487 aaPredicted RBP16.9■□□□□ 0.3
VPS37A-206ENST00000520140 RASEFQ8IZ41 740 aa16.9■□□□□ 0.3
VPS37A-206ENST00000520140 CELF2O95319 508 aaKnown RBP16.9■□□□□ 0.3
VPS37A-206ENST00000520140 NF2P35240 595 aa16.9■□□□□ 0.3
VPS37A-206ENST00000520140 SHROOM1Q2M3G4 852 aaPredicted RBP16.9■□□□□ 0.3
VPS37A-206ENST00000520140 MKNK2Q9HBH9 465 aa16.9■□□□□ 0.3
VPS37A-206ENST00000520140 CDK8P49336 464 aa16.89■□□□□ 0.29
VPS37A-206ENST00000520140 GABPAQ06546 454 aa16.89■□□□□ 0.29
VPS37A-206ENST00000520140 FOXP4Q8IVH2 680 aaPredicted RBP16.89■□□□□ 0.29
VPS37A-206ENST00000520140 NKX2-3Q8TAU0 364 aa16.89■□□□□ 0.29
VPS37A-206ENST00000520140 GDF11O95390 407 aa16.88■□□□□ 0.29
VPS37A-206ENST00000520140 SHMT1P34896 483 aa16.88■□□□□ 0.29
VPS37A-206ENST00000520140 HSPA4P34932 840 aa16.88■□□□□ 0.29
VPS37A-206ENST00000520140 MFSD6Q6ZSS7 791 aa16.88■□□□□ 0.29
VPS37A-206ENST00000520140 C16orf86Q6ZW13 317 aa16.88■□□□□ 0.29
VPS37A-206ENST00000520140 RBM46Q8TBY0 533 aaKnown RBP16.88■□□□□ 0.29
VPS37A-206ENST00000520140 EHD4Q9H223 541 aa16.88■□□□□ 0.29
VPS37A-206ENST00000520140 ANGEL1Q9UNK9 670 aaKnown RBP16.88■□□□□ 0.29
VPS37A-206ENST00000520140 NEDD4P46934 1319 aa16.88■□□□□ 0.29
VPS37A-206ENST00000520140 SLC3A2P08195 630 aaKnown RBP16.88■□□□□ 0.29
VPS37A-206ENST00000520140 PDE4BQ07343 736 aa16.88■□□□□ 0.29
VPS37A-206ENST00000520140 COL9A3Q14050 684 aaPredicted RBP16.88■□□□□ 0.29
VPS37A-206ENST00000520140 RRP1BQ14684 758 aaKnown RBP16.88■□□□□ 0.29
VPS37A-206ENST00000520140 AKNAD1Q5T1N1 836 aa16.88■□□□□ 0.29
VPS37A-206ENST00000520140 RNF20Q5VTR2 975 aa16.88■□□□□ 0.29
VPS37A-206ENST00000520140 CST9Q5W186 159 aa16.88■□□□□ 0.29
VPS37A-206ENST00000520140 STOX1Q6ZVD7 989 aa16.88■□□□□ 0.29
VPS37A-206ENST00000520140 WRNIP1Q96S55 665 aa16.88■□□□□ 0.29
VPS37A-206ENST00000520140 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.88■□□□□ 0.29
VPS37A-206ENST00000520140 HERC5Q9UII4 1024 aaKnown RBP16.88■□□□□ 0.29
VPS37A-206ENST00000520140 ANAPC4Q9UJX5 808 aa16.88■□□□□ 0.29
VPS37A-206ENST00000520140 PCNTO95613 3336 aa16.88■□□□□ 0.29
VPS37A-206ENST00000520140 TRPM7Q96QT4 1865 aa16.87■□□□□ 0.29
VPS37A-206ENST00000520140 PPP1R12BO60237 982 aaPredicted RBP16.87■□□□□ 0.29
VPS37A-206ENST00000520140 ADCK5Q3MIX3 580 aa16.87■□□□□ 0.29
VPS37A-206ENST00000520140 FAM47AQ5JRC9 791 aa16.87■□□□□ 0.29
VPS37A-206ENST00000520140 DCAF15Q66K64 600 aa16.87■□□□□ 0.29
VPS37A-206ENST00000520140 ZKSCAN4Q969J2 545 aaPredicted RBP16.87■□□□□ 0.29
VPS37A-206ENST00000520140 RBM19Q9Y4C8 960 aaKnown RBP16.87■□□□□ 0.29
VPS37A-206ENST00000520140 ROBO3Q96MS0 1386 aa16.87■□□□□ 0.29
VPS37A-206ENST00000520140 E7EWF7 191 aa16.87■□□□□ 0.29
VPS37A-206ENST00000520140 MPHOSPH10O00566 681 aaKnown RBP16.87■□□□□ 0.29
VPS37A-206ENST00000520140 RANBP6O60518 1105 aaKnown RBP16.87■□□□□ 0.29
VPS37A-206ENST00000520140 USP2O75604 605 aaPredicted RBP16.87■□□□□ 0.29
VPS37A-206ENST00000520140 ZKSCAN1P17029 563 aaPredicted RBP16.87■□□□□ 0.29
VPS37A-206ENST00000520140 INPP5BP32019 993 aa16.87■□□□□ 0.29
VPS37A-206ENST00000520140 UPF2Q9HAU5 1272 aaKnown RBP16.87■□□□□ 0.29
VPS37A-206ENST00000520140 SNX14Q9Y5W7 946 aa16.87■□□□□ 0.29
VPS37A-206ENST00000520140 B4E1Z4 1266 aa16.86■□□□□ 0.29
VPS37A-206ENST00000520140 UBE2Q2LH0YL09 131 aa16.86■□□□□ 0.29
VPS37A-206ENST00000520140 MCCP23508 829 aa16.86■□□□□ 0.29
VPS37A-206ENST00000520140 CERKLQ49MI3 558 aaPredicted RBP16.86■□□□□ 0.29
VPS37A-206ENST00000520140 HOOK2Q96ED9 719 aa16.86■□□□□ 0.29
VPS37A-206ENST00000520140 ZNF341Q9BYN7 854 aa16.86■□□□□ 0.29
VPS37A-206ENST00000520140 C22orf23Q9BZE7 217 aa16.86■□□□□ 0.29
VPS37A-206ENST00000520140 PHF20L1A8MW92 1017 aa16.85■□□□□ 0.29
VPS37A-206ENST00000520140 TBC1D12O60347 775 aa16.85■□□□□ 0.29
VPS37A-206ENST00000520140 RASA1P20936 1047 aa16.85■□□□□ 0.29
VPS37A-206ENST00000520140 JAG1P78504 1218 aa16.85■□□□□ 0.29
VPS37A-206ENST00000520140 CHST3Q7LGC8 479 aa16.85■□□□□ 0.29
VPS37A-206ENST00000520140 METTL16Q86W50 562 aaKnown RBP16.85■□□□□ 0.29
VPS37A-206ENST00000520140 STAG1Q8WVM7 1258 aa16.85■□□□□ 0.29
VPS37A-206ENST00000520140 KLRG1Q96E93 195 aa16.85■□□□□ 0.29
VPS37A-206ENST00000520140 SWAP70Q9UH65 585 aa16.85■□□□□ 0.29
VPS37A-206ENST00000520140 PASKQ96RG2 1323 aa16.85■□□□□ 0.29
VPS37A-206ENST00000520140 OTOFQ9HC10 1997 aa16.85■□□□□ 0.29
VPS37A-206ENST00000520140 AKR1B1P15121 316 aa16.85■□□□□ 0.29
VPS37A-206ENST00000520140 TATDN1Q6P1N9 297 aa16.85■□□□□ 0.29
VPS37A-206ENST00000520140 CCDC84Q86UT8 332 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms