RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 ARMC10Q8N2F6 343 aa8.61□□□□□ -1.03
NPM1-206ENST00000519955 WNT10AQ9GZT5 417 aa8.61□□□□□ -1.03
NPM1-206ENST00000519955 DHX15O43143 795 aaKnown RBP8.6□□□□□ -1.03
NPM1-206ENST00000519955 ADAM23O75077 832 aa8.6□□□□□ -1.03
NPM1-206ENST00000519955 BMP3P12645 472 aa8.6□□□□□ -1.03
NPM1-206ENST00000519955 ZNF165P49910 485 aa8.6□□□□□ -1.03
NPM1-206ENST00000519955 KCT2Q8NC54 265 aa8.6□□□□□ -1.03
NPM1-206ENST00000519955 ACSS3Q9H6R3 686 aa8.6□□□□□ -1.03
NPM1-206ENST00000519955 BRMS1Q9HCU9 246 aa8.6□□□□□ -1.03
NPM1-206ENST00000519955 PRR36Q9H6K5 1346 aa8.59□□□□□ -1.03
NPM1-206ENST00000519955 HCLS1P14317 486 aaPredicted RBP8.59□□□□□ -1.03
NPM1-206ENST00000519955 MCM4P33991 863 aa8.59□□□□□ -1.03
NPM1-206ENST00000519955 ETF1P62495 437 aaKnown RBP8.59□□□□□ -1.03
NPM1-206ENST00000519955 SGO2Q562F6 1265 aa8.59□□□□□ -1.03
NPM1-206ENST00000519955 FAM20CQ8IXL6 584 aa8.59□□□□□ -1.03
NPM1-206ENST00000519955 SMYD4Q8IYR2 804 aaPredicted RBP8.59□□□□□ -1.03
NPM1-206ENST00000519955 ZNF507Q8TCN5 953 aa8.59□□□□□ -1.03
NPM1-206ENST00000519955 EZH1Q92800 747 aaPredicted RBP8.59□□□□□ -1.03
NPM1-206ENST00000519955 TP53INP1Q96A56 240 aa8.59□□□□□ -1.03
NPM1-206ENST00000519955 SEC16BQ96JE7 1060 aa8.59□□□□□ -1.03
NPM1-206ENST00000519955 POLR3KQ9Y2Y1 108 aaPredicted RBP8.59□□□□□ -1.03
NPM1-206ENST00000519955 RNGTTO60942 597 aaKnown RBP8.58□□□□□ -1.04
NPM1-206ENST00000519955 NEFMP07197 916 aa8.58□□□□□ -1.04
NPM1-206ENST00000519955 RAB6AP20340 208 aa8.58□□□□□ -1.04
NPM1-206ENST00000519955 MAP4P27816 1152 aaKnown RBP8.58□□□□□ -1.04
NPM1-206ENST00000519955 GRK4P32298 578 aa8.58□□□□□ -1.04
NPM1-206ENST00000519955 NTF4P34130 210 aa8.58□□□□□ -1.04
NPM1-206ENST00000519955 CDPF1Q6NVV7 123 aa8.58□□□□□ -1.04
NPM1-206ENST00000519955 CDC37L1Q7L3B6 337 aa8.58□□□□□ -1.04
NPM1-206ENST00000519955 FBLIM1Q8WUP2 373 aa8.58□□□□□ -1.04
NPM1-206ENST00000519955 EHMT1Q9H9B1 1298 aa8.58□□□□□ -1.04
NPM1-206ENST00000519955 ADAM30Q9UKF2 790 aa8.58□□□□□ -1.04
NPM1-206ENST00000519955 PCOLCE2Q9UKZ9 415 aa8.58□□□□□ -1.04
NPM1-206ENST00000519955 GRIN3BO60391 1043 aa8.57□□□□□ -1.04
NPM1-206ENST00000519955 ATE1O95260 518 aa8.57□□□□□ -1.04
NPM1-206ENST00000519955 PGRP06401 933 aa8.57□□□□□ -1.04
NPM1-206ENST00000519955 RXRBP28702 533 aa8.57□□□□□ -1.04
NPM1-206ENST00000519955 SOX9P48436 509 aa8.57□□□□□ -1.04
NPM1-206ENST00000519955 MAP7Q14244 749 aa8.57□□□□□ -1.04
NPM1-206ENST00000519955 ISL2Q96A47 359 aa8.57□□□□□ -1.04
NPM1-206ENST00000519955 SSU72Q9NP77 194 aaKnown RBP8.57□□□□□ -1.04
NPM1-206ENST00000519955 GINM1Q9NU53 330 aa8.57□□□□□ -1.04
NPM1-206ENST00000519955 EFR3BQ9Y2G0 817 aa8.57□□□□□ -1.04
NPM1-206ENST00000519955 PCDHB14Q9Y5E9 798 aa8.57□□□□□ -1.04
NPM1-206ENST00000519955 HTR3BO95264 441 aa8.56□□□□□ -1.04
NPM1-206ENST00000519955 ATF4P18848 351 aaPredicted RBP8.56□□□□□ -1.04
NPM1-206ENST00000519955 ARID5AQ03989 594 aa8.56□□□□□ -1.04
NPM1-206ENST00000519955 MLECQ14165 292 aa8.56□□□□□ -1.04
NPM1-206ENST00000519955 TMEM201Q5SNT2 666 aa8.56□□□□□ -1.04
NPM1-206ENST00000519955 CLEC10AQ8IUN9 316 aa8.56□□□□□ -1.04
NPM1-206ENST00000519955 HID1Q8IV36 788 aa8.56□□□□□ -1.04
NPM1-206ENST00000519955 GMLQ99445 158 aa8.56□□□□□ -1.04
NPM1-206ENST00000519955 KCNF1Q9H3M0 494 aa8.56□□□□□ -1.04
NPM1-206ENST00000519955 SEMA6CQ9H3T2 930 aa8.56□□□□□ -1.04
NPM1-206ENST00000519955 TPSG1Q9NRR2 321 aa8.56□□□□□ -1.04
NPM1-206ENST00000519955 CORINQ9Y5Q5 1042 aa8.56□□□□□ -1.04
NPM1-206ENST00000519955 FAM95CA0A1B0GW59 222 aa8.55□□□□□ -1.04
NPM1-206ENST00000519955 NFICP08651 508 aa8.55□□□□□ -1.04
NPM1-206ENST00000519955 IMPDH2P12268 514 aa8.55□□□□□ -1.04
NPM1-206ENST00000519955 PLCG1P19174 1290 aa8.55□□□□□ -1.04
NPM1-206ENST00000519955 GK5Q6ZS86 529 aa8.55□□□□□ -1.04
NPM1-206ENST00000519955 BEND4Q6ZU67 534 aa8.55□□□□□ -1.04
NPM1-206ENST00000519955 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.55□□□□□ -1.04
NPM1-206ENST00000519955 SPOCK3Q9BQ16 436 aa8.55□□□□□ -1.04
NPM1-206ENST00000519955 FAM83CQ9BQN1 747 aa8.55□□□□□ -1.04
NPM1-206ENST00000519955 STRIP2Q9ULQ0 834 aa8.55□□□□□ -1.04
NPM1-206ENST00000519955 RAXQ9Y2V3 346 aa8.55□□□□□ -1.04
NPM1-206ENST00000519955 DAGLAQ9Y4D2 1042 aa8.55□□□□□ -1.04
NPM1-206ENST00000519955 MSTNO14793 375 aa8.54□□□□□ -1.04
NPM1-206ENST00000519955 CAP2P40123 477 aa8.54□□□□□ -1.04
NPM1-206ENST00000519955 NASPP49321 788 aaPredicted RBP8.54□□□□□ -1.04
NPM1-206ENST00000519955 CLCQ05315 142 aa8.54□□□□□ -1.04
NPM1-206ENST00000519955 PAOXQ6QHF9 649 aa8.54□□□□□ -1.04
NPM1-206ENST00000519955 PRR23CQ6ZRP0 262 aa8.54□□□□□ -1.04
NPM1-206ENST00000519955 FERD3LQ96RJ6 166 aa8.54□□□□□ -1.04
NPM1-206ENST00000519955 REV1Q9UBZ9 1251 aa8.54□□□□□ -1.04
NPM1-206ENST00000519955 ZNRF3Q9ULT6 936 aa8.54□□□□□ -1.04
NPM1-206ENST00000519955 PROCP04070 461 aa8.53□□□□□ -1.04
NPM1-206ENST00000519955 DNAJA1P31689 397 aaKnown RBP8.53□□□□□ -1.04
NPM1-206ENST00000519955 LRRFIP1Q32MZ4 808 aaKnown RBP8.53□□□□□ -1.04
NPM1-206ENST00000519955 SLC6A19Q695T7 634 aa8.53□□□□□ -1.04
NPM1-206ENST00000519955 MRPL41Q8IXM3 137 aaKnown RBP8.53□□□□□ -1.04
NPM1-206ENST00000519955 FBRSQ9HAH7 460 aa8.53□□□□□ -1.04
NPM1-206ENST00000519955 STOML1Q9UBI4 398 aa8.53□□□□□ -1.04
NPM1-206ENST00000519955 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.52□□□□□ -1.05
NPM1-206ENST00000519955 H2AFB1P0C5Y9 115 aa8.52□□□□□ -1.05
NPM1-206ENST00000519955 H2AFB2P0C5Z0 115 aa8.52□□□□□ -1.05
NPM1-206ENST00000519955 DOC2BQ14184 412 aa8.52□□□□□ -1.05
NPM1-206ENST00000519955 NFKBIBQ15653 356 aa8.52□□□□□ -1.05
NPM1-206ENST00000519955 MCATQ8IVS2 390 aaKnown RBP8.52□□□□□ -1.05
NPM1-206ENST00000519955 ACSF2Q96CM8 615 aaPredicted RBP8.52□□□□□ -1.05
NPM1-206ENST00000519955 TMEM87BQ96K49 555 aa8.52□□□□□ -1.05
NPM1-206ENST00000519955 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.52□□□□□ -1.052e-11■■□□□ 12.7
NPM1-206ENST00000519955 TJP2Q9UDY2 1190 aa8.52□□□□□ -1.05
NPM1-206ENST00000519955 PPT2Q9UMR5 302 aa8.52□□□□□ -1.05
NPM1-206ENST00000519955 FGRP09769 529 aa8.51□□□□□ -1.05
NPM1-206ENST00000519955 YARSP54577 528 aaKnown RBP8.51□□□□□ -1.05
NPM1-206ENST00000519955 SLBPQ14493 270 aaKnown RBP eCLIP8.51□□□□□ -1.05
NPM1-206ENST00000519955 SF3A1Q15459 793 aaKnown RBP8.51□□□□□ -1.05
NPM1-206ENST00000519955 SEZ6L2Q6UXD5 910 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms