RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 TRIM17Q9Y577 477 aa10.77□□□□□ -0.69
PABPC1-213ENST00000519848 PHF20L1A8MW92 1017 aa10.76□□□□□ -0.69
PABPC1-213ENST00000519848 FRAT2O75474 233 aaPredicted RBP10.76□□□□□ -0.69
PABPC1-213ENST00000519848 IL15P40933 162 aaPredicted RBP10.76□□□□□ -0.69
PABPC1-213ENST00000519848 MCAMP43121 646 aa10.76□□□□□ -0.69
PABPC1-213ENST00000519848 RGS3P49796 1198 aa10.76□□□□□ -0.69
PABPC1-213ENST00000519848 JAG1P78504 1218 aa10.76□□□□□ -0.69
PABPC1-213ENST00000519848 FKBP1CQ5VVH2 108 aa10.76□□□□□ -0.69
PABPC1-213ENST00000519848 ATF7IPQ6VMQ6 1270 aa10.76□□□□□ -0.69
PABPC1-213ENST00000519848 ARHGAP45Q92619 1136 aa10.76□□□□□ -0.69
PABPC1-213ENST00000519848 FRAT1Q92837 279 aaPredicted RBP10.76□□□□□ -0.69
PABPC1-213ENST00000519848 MRIQ9BWK5 157 aa10.76□□□□□ -0.69
PABPC1-213ENST00000519848 CEP126Q9P2H0 1117 aa10.76□□□□□ -0.69
PABPC1-213ENST00000519848 MECOMQ03112 1051 aa10.75□□□□□ -0.69
PABPC1-213ENST00000519848 GPAT2Q6NUI2 795 aa10.75□□□□□ -0.69
PABPC1-213ENST00000519848 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.75□□□□□ -0.69
PABPC1-213ENST00000519848 WDR66Q8TBY9 1149 aa10.75□□□□□ -0.69
PABPC1-213ENST00000519848 FAM151AQ8WW52 585 aa10.75□□□□□ -0.69
PABPC1-213ENST00000519848 PTPN22Q9Y2R2 807 aa10.75□□□□□ -0.69
PABPC1-213ENST00000519848 SUGT1Q9Y2Z0 365 aa10.75□□□□□ -0.69
PABPC1-213ENST00000519848 PTCH2Q9Y6C5 1203 aa10.75□□□□□ -0.69
PABPC1-213ENST00000519848 NDUFB9Q9Y6M9 179 aa10.75□□□□□ -0.69
PABPC1-213ENST00000519848 PLXNB2O15031 1838 aa10.74□□□□□ -0.69
PABPC1-213ENST00000519848 UNCXA6NJT0 531 aa10.74□□□□□ -0.69
PABPC1-213ENST00000519848 LDHBP07195 334 aaKnown RBP10.74□□□□□ -0.69
PABPC1-213ENST00000519848 ARID4AP29374 1257 aaPredicted RBP10.74□□□□□ -0.69
PABPC1-213ENST00000519848 BTDP43251 543 aa10.74□□□□□ -0.69
PABPC1-213ENST00000519848 TAF1CQ15572 869 aaPredicted RBP10.74□□□□□ -0.69
PABPC1-213ENST00000519848 TMC2Q8TDI7 906 aa10.74□□□□□ -0.69
PABPC1-213ENST00000519848 DBNDD2Q9BQY9 259 aa10.74□□□□□ -0.69
PABPC1-213ENST00000519848 USP40Q9NVE5 1235 aa10.74□□□□□ -0.69
PABPC1-213ENST00000519848 MROH7-TTC4A0A0A0MT08 1334 aa10.74□□□□□ -0.69
PABPC1-213ENST00000519848 MAST3O60307 1309 aa10.74□□□□□ -0.69
PABPC1-213ENST00000519848 PDS5AQ29RF7 1337 aaKnown RBP10.74□□□□□ -0.69
PABPC1-213ENST00000519848 TNNI2P48788 182 aa10.73□□□□□ -0.69
PABPC1-213ENST00000519848 HNRNPUQ00839 825 aaKnown RBP eCLIP10.73□□□□□ -0.69
PABPC1-213ENST00000519848 PPIL2Q13356 520 aa10.73□□□□□ -0.69
PABPC1-213ENST00000519848 NOL9Q5SY16 702 aaKnown RBP10.73□□□□□ -0.69
PABPC1-213ENST00000519848 ERO1BQ86YB8 467 aa10.73□□□□□ -0.69
PABPC1-213ENST00000519848 PTCD2Q8WV60 388 aaKnown RBP10.73□□□□□ -0.69
PABPC1-213ENST00000519848 IDI2Q9BXS1 227 aa10.73□□□□□ -0.69
PABPC1-213ENST00000519848 DNAJC18Q9H819 358 aa10.73□□□□□ -0.69
PABPC1-213ENST00000519848 DENND2AQ9ULE3 1009 aa10.73□□□□□ -0.69
PABPC1-213ENST00000519848 KCNH4Q9UQ05 1017 aa10.73□□□□□ -0.69
PABPC1-213ENST00000519848 PDE4DIPQ5VU43 2346 aa10.72□□□□□ -0.69
PABPC1-213ENST00000519848 SEMA3EO15041 775 aa10.72□□□□□ -0.69
PABPC1-213ENST00000519848 PEX10O60683 326 aa10.72□□□□□ -0.69
PABPC1-213ENST00000519848 ALDH1A1P00352 501 aa10.72□□□□□ -0.69
PABPC1-213ENST00000519848 EN2P19622 333 aaPredicted RBP10.72□□□□□ -0.69
PABPC1-213ENST00000519848 SP3Q02447 781 aa10.72□□□□□ -0.69
PABPC1-213ENST00000519848 PICALMQ13492 652 aa10.72□□□□□ -0.69
PABPC1-213ENST00000519848 PKN2Q16513 984 aaKnown RBP10.72□□□□□ -0.69
PABPC1-213ENST00000519848 ARMC5Q96C12 935 aa10.72□□□□□ -0.69
PABPC1-213ENST00000519848 NSUN4Q96CB9 384 aaKnown RBP10.72□□□□□ -0.69
PABPC1-213ENST00000519848 SHISA4Q96DD7 197 aa10.72□□□□□ -0.69
PABPC1-213ENST00000519848 ZNF341Q9BYN7 854 aa10.72□□□□□ -0.69
PABPC1-213ENST00000519848 PIH1D3Q9NQM4 214 aaKnown RBP10.72□□□□□ -0.69
PABPC1-213ENST00000519848 SNRKQ9NRH2 765 aa10.72□□□□□ -0.69
PABPC1-213ENST00000519848 ABCF2Q9UG63 623 aa10.72□□□□□ -0.69
PABPC1-213ENST00000519848 CPA4Q9UI42 421 aa10.72□□□□□ -0.69
PABPC1-213ENST00000519848 DBNLQ9UJU6 430 aaKnown RBP10.72□□□□□ -0.69
PABPC1-213ENST00000519848 VPS9D1Q9Y2B5 631 aa10.72□□□□□ -0.69
PABPC1-213ENST00000519848 CSADQ9Y600 493 aa10.72□□□□□ -0.69
PABPC1-213ENST00000519848 GPR75-ASB3A0A0A6YYF3 556 aa10.71□□□□□ -0.69
PABPC1-213ENST00000519848 TLR2O60603 784 aa10.71□□□□□ -0.69
PABPC1-213ENST00000519848 MYCP01106 439 aaPredicted RBP10.71□□□□□ -0.69
PABPC1-213ENST00000519848 COL2A1P02458 1487 aaPredicted RBP10.71□□□□□ -0.69
PABPC1-213ENST00000519848 GNAI3P08754 354 aa10.71□□□□□ -0.69
PABPC1-213ENST00000519848 CYP2C8P10632 490 aa10.71□□□□□ -0.69
PABPC1-213ENST00000519848 GTF2A2P52657 109 aa10.71□□□□□ -0.69
PABPC1-213ENST00000519848 INHBEP58166 350 aa10.71□□□□□ -0.69
PABPC1-213ENST00000519848 MAP3K10Q02779 954 aa10.71□□□□□ -0.69
PABPC1-213ENST00000519848 TNNI3KQ59H18 835 aa10.71□□□□□ -0.69
PABPC1-213ENST00000519848 PPP4R3BQ5MIZ7 849 aa10.71□□□□□ -0.69
PABPC1-213ENST00000519848 C17orf99Q6UX52 265 aa10.71□□□□□ -0.69
PABPC1-213ENST00000519848 SPATA5Q8NB90 893 aa10.71□□□□□ -0.69
PABPC1-213ENST00000519848 PANK1Q8TE04 598 aa10.71□□□□□ -0.69
PABPC1-213ENST00000519848 SSH3Q8TE77 659 aa10.71□□□□□ -0.69
PABPC1-213ENST00000519848 SH3TC2Q8TF17 1288 aa10.71□□□□□ -0.69
PABPC1-213ENST00000519848 ZNF333Q96JL9 665 aa10.71□□□□□ -0.69
PABPC1-213ENST00000519848 ALPK3Q96L96 1907 aa10.71□□□□□ -0.69
PABPC1-213ENST00000519848 TRIM47Q96LD4 638 aa10.71□□□□□ -0.69
PABPC1-213ENST00000519848 FPGT-TNNI3KV9GXZ4 949 aa10.71□□□□□ -0.69
PABPC1-213ENST00000519848 ZBTB7BO15156 539 aaPredicted RBP10.7□□□□□ -0.7
PABPC1-213ENST00000519848 GNAI2P04899 355 aa10.7□□□□□ -0.7
PABPC1-213ENST00000519848 CYP2E1P05181 493 aaPredicted RBP10.7□□□□□ -0.7
PABPC1-213ENST00000519848 PTPRAP18433 802 aa10.7□□□□□ -0.7
PABPC1-213ENST00000519848 LACTBP83111 547 aaPredicted RBP10.7□□□□□ -0.7
PABPC1-213ENST00000519848 ZKSCAN2Q63HK3 967 aa10.7□□□□□ -0.7
PABPC1-213ENST00000519848 DZIP1Q86YF9 867 aaKnown RBP10.7□□□□□ -0.7
PABPC1-213ENST00000519848 SH3RF3Q8TEJ3 882 aaPredicted RBP10.7□□□□□ -0.7
PABPC1-213ENST00000519848 ERO1AQ96HE7 468 aa10.7□□□□□ -0.7
PABPC1-213ENST00000519848 KCNK17Q96T54 332 aa10.7□□□□□ -0.7
PABPC1-213ENST00000519848 EFCC1Q9HA90 598 aa10.7□□□□□ -0.7
PABPC1-213ENST00000519848 TMOD2Q9NZR1 351 aa10.7□□□□□ -0.7
PABPC1-213ENST00000519848 DOCK3Q8IZD9 2030 aa10.7□□□□□ -0.7
PABPC1-213ENST00000519848 NAV1Q8NEY1 1877 aa10.7□□□□□ -0.7
PABPC1-213ENST00000519848 KIAA0100Q14667 2235 aaKnown RBP10.69□□□□□ -0.7
PABPC1-213ENST00000519848 A0A0G2JLL6 359 aaPredicted RBP10.69□□□□□ -0.7
PABPC1-213ENST00000519848 PDHXO00330 501 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms