RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 DHX36Q9H2U1 1008 aaKnown RBP14.24□□□□□ -0.13
HPS4-218ENST00000519774 ELP3Q9H9T3 547 aa14.24□□□□□ -0.13
HPS4-218ENST00000519774 MCM9Q9NXL9 1143 aa14.24□□□□□ -0.13
HPS4-218ENST00000519774 CSADQ9Y600 493 aa14.24□□□□□ -0.13
HPS4-218ENST00000519774 THSD7BQ9C0I4 1608 aa14.23□□□□□ -0.13
HPS4-218ENST00000519774 SLC10A3P09131 477 aa14.23□□□□□ -0.13
HPS4-218ENST00000519774 INPP5BP32019 993 aa14.23□□□□□ -0.13
HPS4-218ENST00000519774 MKRN3Q13064 507 aaKnown RBP14.23□□□□□ -0.13
HPS4-218ENST00000519774 NMIQ13287 307 aaPredicted RBP14.23□□□□□ -0.13
HPS4-218ENST00000519774 CRACR2BQ8N4Y2 399 aaPredicted RBP14.23□□□□□ -0.13
HPS4-218ENST00000519774 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.23□□□□□ -0.13
HPS4-218ENST00000519774 CCDC102AQ96A19 550 aa14.23□□□□□ -0.13
HPS4-218ENST00000519774 SLC10A4Q96EP9 437 aa14.23□□□□□ -0.13
HPS4-218ENST00000519774 STRBPQ96SI9 672 aaKnown RBP14.23□□□□□ -0.13
HPS4-218ENST00000519774 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.23□□□□□ -0.13
HPS4-218ENST00000519774 DCP1AQ9NPI6 582 aaPredicted RBP14.23□□□□□ -0.13
HPS4-218ENST00000519774 A0A0D9SFI3 127 aa14.22□□□□□ -0.13
HPS4-218ENST00000519774 POLR3DP05423 398 aaPredicted RBP14.22□□□□□ -0.13
HPS4-218ENST00000519774 VGLL4Q14135 290 aa14.22□□□□□ -0.13
HPS4-218ENST00000519774 CCDC129Q6ZRS4 1044 aa14.22□□□□□ -0.13
HPS4-218ENST00000519774 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.22□□□□□ -0.13
HPS4-218ENST00000519774 ZKSCAN4Q969J2 545 aaPredicted RBP14.22□□□□□ -0.13
HPS4-218ENST00000519774 DDRGK1Q96HY6 314 aa14.22□□□□□ -0.13
HPS4-218ENST00000519774 FAM227BQ96M60 508 aa14.22□□□□□ -0.13
HPS4-218ENST00000519774 DIAPH3Q9NSV4 1193 aa14.22□□□□□ -0.13
HPS4-218ENST00000519774 PI4KBQ9UBF8 816 aa14.22□□□□□ -0.13
HPS4-218ENST00000519774 DOCK1Q14185 1865 aa14.22□□□□□ -0.13
HPS4-218ENST00000519774 FAM155AB1AL88 458 aaPredicted RBP14.21□□□□□ -0.13
HPS4-218ENST00000519774 APPP05067 770 aa14.21□□□□□ -0.13
HPS4-218ENST00000519774 CYP2D6P10635 497 aa14.21□□□□□ -0.13
HPS4-218ENST00000519774 SDSP20132 328 aa14.21□□□□□ -0.13
HPS4-218ENST00000519774 NOGQ13253 232 aa14.21□□□□□ -0.13
HPS4-218ENST00000519774 TTC6Q86TZ1 520 aa14.21□□□□□ -0.13
HPS4-218ENST00000519774 ZIC5Q96T25 663 aa14.21□□□□□ -0.13
HPS4-218ENST00000519774 ATP8A2Q9NTI2 1148 aa14.21□□□□□ -0.13
HPS4-218ENST00000519774 HERC5Q9UII4 1024 aaKnown RBP14.21□□□□□ -0.13
HPS4-218ENST00000519774 SNCAIPQ9Y6H5 919 aa14.21□□□□□ -0.13
HPS4-218ENST00000519774 ATAD5Q96QE3 1844 aa14.2□□□□□ -0.14
HPS4-218ENST00000519774 UNCXA6NJT0 531 aa14.2□□□□□ -0.14
HPS4-218ENST00000519774 GSG1L2A8MUP6 293 aa14.2□□□□□ -0.14
HPS4-218ENST00000519774 GNAT2P19087 354 aa14.2□□□□□ -0.14
HPS4-218ENST00000519774 EVX2Q03828 476 aa14.2□□□□□ -0.14
HPS4-218ENST00000519774 SPRYD7Q5W111 196 aa14.2□□□□□ -0.14
HPS4-218ENST00000519774 AMOTL1Q8IY63 956 aa14.2□□□□□ -0.14
HPS4-218ENST00000519774 WNK4Q96J92 1243 aa14.2□□□□□ -0.14
HPS4-218ENST00000519774 DNAJC18Q9H819 358 aa14.2□□□□□ -0.14
HPS4-218ENST00000519774 HELLSQ9NRZ9 838 aa14.2□□□□□ -0.14
HPS4-218ENST00000519774 ZNF112Q9UJU3 913 aa14.2□□□□□ -0.14
HPS4-218ENST00000519774 LAMB1P07942 1786 aa14.19□□□□□ -0.14
HPS4-218ENST00000519774 CYP2D7A0A087X1C5 515 aa14.19□□□□□ -0.14
HPS4-218ENST00000519774 PHF20L1A8MW92 1017 aa14.19□□□□□ -0.14
HPS4-218ENST00000519774 HIP1O00291 1037 aa14.19□□□□□ -0.14
HPS4-218ENST00000519774 TBC1D12O60347 775 aa14.19□□□□□ -0.14
HPS4-218ENST00000519774 TDO2P48775 406 aa14.19□□□□□ -0.14
HPS4-218ENST00000519774 PLCD1P51178 756 aa14.19□□□□□ -0.14
HPS4-218ENST00000519774 KIF23Q02241 960 aaPredicted RBP14.19□□□□□ -0.14
HPS4-218ENST00000519774 MAP3K10Q02779 954 aa14.19□□□□□ -0.14
HPS4-218ENST00000519774 MCMDC2Q4G0Z9 681 aa14.19□□□□□ -0.14
HPS4-218ENST00000519774 TICAM2Q86XR7 235 aa14.19□□□□□ -0.14
HPS4-218ENST00000519774 FOXP4Q8IVH2 680 aaPredicted RBP14.19□□□□□ -0.14
HPS4-218ENST00000519774 OPTNQ96CV9 577 aa14.19□□□□□ -0.14
HPS4-218ENST00000519774 OTUD5Q96G74 571 aa14.19□□□□□ -0.14
HPS4-218ENST00000519774 EPB41L4AQ9HCS5 686 aaPredicted RBP14.19□□□□□ -0.14
HPS4-218ENST00000519774 SERPINB13Q9UIV8 391 aa14.19□□□□□ -0.14
HPS4-218ENST00000519774 MYH8P13535 1937 aa14.18□□□□□ -0.14
HPS4-218ENST00000519774 SPDYE5A6NIY4 337 aa14.18□□□□□ -0.14
HPS4-218ENST00000519774 USP17L12C9JPN9 530 aa14.18□□□□□ -0.14
HPS4-218ENST00000519774 USP17L21D6R901 530 aa14.18□□□□□ -0.14
HPS4-218ENST00000519774 GJA5P36382 358 aa14.18□□□□□ -0.14
HPS4-218ENST00000519774 NOL9Q5SY16 702 aaKnown RBP14.18□□□□□ -0.14
HPS4-218ENST00000519774 CWC27Q6UX04 472 aaKnown RBP14.18□□□□□ -0.14
HPS4-218ENST00000519774 ZNF589Q86UQ0 364 aaPredicted RBP14.18□□□□□ -0.14
HPS4-218ENST00000519774 SCYL3Q8IZE3 742 aa14.18□□□□□ -0.14
HPS4-218ENST00000519774 JMYQ8N9B5 988 aa14.18□□□□□ -0.14
HPS4-218ENST00000519774 EHD4Q9H223 541 aa14.18□□□□□ -0.14
HPS4-218ENST00000519774 PICK1Q9NRD5 415 aa14.18□□□□□ -0.14
HPS4-218ENST00000519774 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.18□□□□□ -0.14
HPS4-218ENST00000519774 ARPP21Q9UBL0 812 aaPredicted RBP14.18□□□□□ -0.14
HPS4-218ENST00000519774 CEP350Q5VT06 3117 aa14.18□□□□□ -0.14
HPS4-218ENST00000519774 CCDC171Q6TFL3 1326 aa14.17□□□□□ -0.14
HPS4-218ENST00000519774 SPDYE4A6NLX3 237 aa14.17□□□□□ -0.14
HPS4-218ENST00000519774 CTNND1O60716 968 aaKnown RBP14.17□□□□□ -0.14
HPS4-218ENST00000519774 GDF11O95390 407 aa14.17□□□□□ -0.14
HPS4-218ENST00000519774 ZBTB48P10074 688 aaPredicted RBP14.17□□□□□ -0.14
HPS4-218ENST00000519774 MAP2K2P36507 400 aa14.17□□□□□ -0.14
HPS4-218ENST00000519774 RRP1BQ14684 758 aaKnown RBP14.17□□□□□ -0.14
HPS4-218ENST00000519774 CTR9Q6PD62 1173 aa14.17□□□□□ -0.14
HPS4-218ENST00000519774 CCDC84Q86UT8 332 aaPredicted RBP14.17□□□□□ -0.14
HPS4-218ENST00000519774 ERO1BQ86YB8 467 aa14.17□□□□□ -0.14
HPS4-218ENST00000519774 IFNL3Q8IZI9 196 aa14.17□□□□□ -0.14
HPS4-218ENST00000519774 DYNLL2Q96FJ2 89 aa14.17□□□□□ -0.14
HPS4-218ENST00000519774 NACAP1Q9BZK3 213 aa14.17□□□□□ -0.14
HPS4-218ENST00000519774 NAPBQ9H115 298 aa14.17□□□□□ -0.14
HPS4-218ENST00000519774 MINDY4BA8MYZ0 360 aa14.16□□□□□ -0.14
HPS4-218ENST00000519774 PATL2C9JE40 543 aaKnown RBP14.16□□□□□ -0.14
HPS4-218ENST00000519774 SMIM22K7EJ46 135 aa14.16□□□□□ -0.14
HPS4-218ENST00000519774 CAP2P40123 477 aa14.16□□□□□ -0.14
HPS4-218ENST00000519774 SHROOM1Q2M3G4 852 aaPredicted RBP14.16□□□□□ -0.14
HPS4-218ENST00000519774 C12orf60Q5U649 245 aa14.16□□□□□ -0.14
HPS4-218ENST00000519774 VPS53Q5VIR6 699 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms