RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 SRRDQ9UH36 339 aa15.26■□□□□ 0.03
CSMD1-205ENST00000519623 SLC45A1Q9Y2W3 748 aa15.26■□□□□ 0.03
CSMD1-205ENST00000519623 DOCK1Q14185 1865 aa15.26■□□□□ 0.03
CSMD1-205ENST00000519623 BRCA2P51587 3418 aa15.26■□□□□ 0.03
CSMD1-205ENST00000519623 MKI67P46013 3256 aaKnown RBP15.25■□□□□ 0.03
CSMD1-205ENST00000519623 TRIM75PA6NK02 468 aa15.25■□□□□ 0.03
CSMD1-205ENST00000519623 OSBPP22059 807 aa15.25■□□□□ 0.03
CSMD1-205ENST00000519623 GADL1Q6ZQY3 521 aa15.25■□□□□ 0.03
CSMD1-205ENST00000519623 PIH1D3Q9NQM4 214 aaKnown RBP15.25■□□□□ 0.03
CSMD1-205ENST00000519623 AATFQ9NY61 560 aaKnown RBP eCLIP15.25■□□□□ 0.03
CSMD1-205ENST00000519623 IGSF3O75054 1194 aa15.24■□□□□ 0.03
CSMD1-205ENST00000519623 FMNL1O95466 1100 aaPredicted RBP15.24■□□□□ 0.03
CSMD1-205ENST00000519623 BAG3O95817 575 aa15.24■□□□□ 0.03
CSMD1-205ENST00000519623 PLCG2P16885 1265 aa15.24■□□□□ 0.03
CSMD1-205ENST00000519623 HOXD10P28358 340 aa15.24■□□□□ 0.03
CSMD1-205ENST00000519623 CAP2P40123 477 aa15.24■□□□□ 0.03
CSMD1-205ENST00000519623 NOL10Q9BSC4 688 aaKnown RBP15.24■□□□□ 0.03
CSMD1-205ENST00000519623 PI4KBQ9UBF8 816 aa15.24■□□□□ 0.03
CSMD1-205ENST00000519623 MYCP01106 439 aaPredicted RBP15.23■□□□□ 0.03
CSMD1-205ENST00000519623 SPP2Q13103 211 aa15.23■□□□□ 0.03
CSMD1-205ENST00000519623 SLC4A8Q2Y0W8 1093 aa15.23■□□□□ 0.03
CSMD1-205ENST00000519623 METTL16Q86W50 562 aaKnown RBP15.23■□□□□ 0.03
CSMD1-205ENST00000519623 TGFBRAP1Q8WUH2 860 aa15.23■□□□□ 0.03
CSMD1-205ENST00000519623 DHX36Q9H2U1 1008 aaKnown RBP15.23■□□□□ 0.03
CSMD1-205ENST00000519623 HERC5Q9UII4 1024 aaKnown RBP15.23■□□□□ 0.03
CSMD1-205ENST00000519623 MGAMO43451 1857 aa15.23■□□□□ 0.03
CSMD1-205ENST00000519623 CDK5RAP2Q96SN8 1893 aa15.23■□□□□ 0.03
CSMD1-205ENST00000519623 TREML2Q5T2D2 321 aa15.22■□□□□ 0.03
CSMD1-205ENST00000519623 MAPKAPK5Q8IW41 473 aa15.22■□□□□ 0.03
CSMD1-205ENST00000519623 ZNF280CQ8ND82 737 aa15.22■□□□□ 0.03
CSMD1-205ENST00000519623 AGTPBP1Q9UPW5 1226 aa15.22■□□□□ 0.03
CSMD1-205ENST00000519623 EXOC6BQ9Y2D4 811 aa15.22■□□□□ 0.03
CSMD1-205ENST00000519623 SIPA1L1O43166 1804 aa15.22■□□□□ 0.03
CSMD1-205ENST00000519623 MYPNQ86TC9 1320 aa15.21■□□□□ 0.03
CSMD1-205ENST00000519623 DOCK3Q8IZD9 2030 aa15.21■□□□□ 0.03
CSMD1-205ENST00000519623 USP17L5A8MUK1 530 aa15.21■□□□□ 0.03
CSMD1-205ENST00000519623 GRK4P32298 578 aa15.21■□□□□ 0.03
CSMD1-205ENST00000519623 FCGRTP55899 365 aa15.21■□□□□ 0.03
CSMD1-205ENST00000519623 DYNLL1P63167 89 aaKnown RBP15.21■□□□□ 0.03
CSMD1-205ENST00000519623 JAG1P78504 1218 aa15.21■□□□□ 0.03
CSMD1-205ENST00000519623 PRKCZQ05513 592 aa15.21■□□□□ 0.03
CSMD1-205ENST00000519623 MTFR1Q15390 333 aa15.21■□□□□ 0.03
CSMD1-205ENST00000519623 FOXP4Q8IVH2 680 aaPredicted RBP15.21■□□□□ 0.03
CSMD1-205ENST00000519623 PROCA1Q8NCQ7 364 aaPredicted RBP15.21■□□□□ 0.03
CSMD1-205ENST00000519623 RAET1EQ8TD07 263 aa15.21■□□□□ 0.03
CSMD1-205ENST00000519623 PALD1Q9ULE6 856 aa15.21■□□□□ 0.03
CSMD1-205ENST00000519623 GABRQQ9UN88 632 aa15.21■□□□□ 0.03
CSMD1-205ENST00000519623 NDUFB9Q9Y6M9 179 aa15.21■□□□□ 0.03
CSMD1-205ENST00000519623 ATAD5Q96QE3 1844 aa15.21■□□□□ 0.03
CSMD1-205ENST00000519623 FLT1P17948 1338 aa15.2■□□□□ 0.02
CSMD1-205ENST00000519623 FOCADQ5VW36 1801 aa15.2■□□□□ 0.02
CSMD1-205ENST00000519623 CYP7A1P22680 504 aa15.2■□□□□ 0.02
CSMD1-205ENST00000519623 SH3D19Q5HYK7 790 aa15.2■□□□□ 0.02
CSMD1-205ENST00000519623 ERC1Q8IUD2 1116 aa15.2■□□□□ 0.02
CSMD1-205ENST00000519623 TBC1D2Q9BYX2 928 aa15.2■□□□□ 0.02
CSMD1-205ENST00000519623 ANTXR1Q9H6X2 564 aa15.2■□□□□ 0.02
CSMD1-205ENST00000519623 DNAJC18Q9H819 358 aa15.2■□□□□ 0.02
CSMD1-205ENST00000519623 MAST2Q6P0Q8 1798 aa15.2■□□□□ 0.02
CSMD1-205ENST00000519623 IDH1O75874 414 aaKnown RBP15.19■□□□□ 0.02
CSMD1-205ENST00000519623 MS4A1P11836 297 aa15.19■□□□□ 0.02
CSMD1-205ENST00000519623 HMGCS2P54868 508 aa15.19■□□□□ 0.02
CSMD1-205ENST00000519623 AACSQ86V21 672 aa15.19■□□□□ 0.02
CSMD1-205ENST00000519623 SIRT2Q8IXJ6 389 aa15.19■□□□□ 0.02
CSMD1-205ENST00000519623 RHPN1Q8TCX5 695 aa15.19■□□□□ 0.02
CSMD1-205ENST00000519623 SMCR8Q8TEV9 937 aaPredicted RBP15.19■□□□□ 0.02
CSMD1-205ENST00000519623 WDR18Q9BV38 432 aa15.19■□□□□ 0.02
CSMD1-205ENST00000519623 SHROOM1Q2M3G4 852 aaPredicted RBP15.18■□□□□ 0.02
CSMD1-205ENST00000519623 RPAP2Q8IXW5 612 aaPredicted RBP15.18■□□□□ 0.02
CSMD1-205ENST00000519623 ANKRD13CQ8N6S4 541 aa15.18■□□□□ 0.02
CSMD1-205ENST00000519623 MAGEB6Q8N7X4 407 aa15.18■□□□□ 0.02
CSMD1-205ENST00000519623 MIGA1Q8NAN2 632 aa15.18■□□□□ 0.02
CSMD1-205ENST00000519623 IL1RAPL2Q9NP60 686 aa15.18■□□□□ 0.02
CSMD1-205ENST00000519623 ZBTB40Q9NUA8 1239 aa15.18■□□□□ 0.02
CSMD1-205ENST00000519623 SAP30BPQ9UHR5 308 aaKnown RBP15.18■□□□□ 0.02
CSMD1-205ENST00000519623 LOC285556D6RIA3 1793 aa15.17■□□□□ 0.02
CSMD1-205ENST00000519623 ASNSP08243 561 aa15.17■□□□□ 0.02
CSMD1-205ENST00000519623 FLT3LGP49771 235 aa15.17■□□□□ 0.02
CSMD1-205ENST00000519623 BACE1P56817 501 aa15.17■□□□□ 0.02
CSMD1-205ENST00000519623 HSP90AB4PQ58FF6 505 aa15.17■□□□□ 0.02
CSMD1-205ENST00000519623 SHISA4Q96DD7 197 aa15.17■□□□□ 0.02
CSMD1-205ENST00000519623 ASCC2Q9H1I8 757 aaPredicted RBP15.17■□□□□ 0.02
CSMD1-205ENST00000519623 AS3MTQ9HBK9 375 aa15.17■□□□□ 0.02
CSMD1-205ENST00000519623 GINM1Q9NU53 330 aa15.17■□□□□ 0.02
CSMD1-205ENST00000519623 PNMA3Q9UL41 463 aa15.17■□□□□ 0.02
CSMD1-205ENST00000519623 COG6Q9Y2V7 657 aa15.17■□□□□ 0.02
CSMD1-205ENST00000519623 CEP290O15078 2479 aa15.16■□□□□ 0.02
CSMD1-205ENST00000519623 ADCY3O60266 1144 aa15.16■□□□□ 0.02
CSMD1-205ENST00000519623 GJB1P08034 283 aa15.16■□□□□ 0.02
CSMD1-205ENST00000519623 CCL5P13501 91 aa15.16■□□□□ 0.02
CSMD1-205ENST00000519623 GCLCP48506 637 aaPredicted RBP15.16■□□□□ 0.02
CSMD1-205ENST00000519623 MAP3K12Q12852 859 aa15.16■□□□□ 0.02
CSMD1-205ENST00000519623 IRF5Q13568 498 aa15.16■□□□□ 0.02
CSMD1-205ENST00000519623 FAM110CQ1W6H9 321 aa15.16■□□□□ 0.02
CSMD1-205ENST00000519623 TMED8Q6PL24 325 aaPredicted RBP15.16■□□□□ 0.02
CSMD1-205ENST00000519623 CRACR2BQ8N4Y2 399 aaPredicted RBP15.16■□□□□ 0.02
CSMD1-205ENST00000519623 SLAIN1Q8ND83 568 aa15.16■□□□□ 0.02
CSMD1-205ENST00000519623 BIN2Q9UBW5 565 aaPredicted RBP15.16■□□□□ 0.02
CSMD1-205ENST00000519623 DDX19BQ9UMR2 479 aa15.16■□□□□ 0.02
CSMD1-205ENST00000519623 MYH1P12882 1939 aa15.15■□□□□ 0.02
CSMD1-205ENST00000519623 TNPO2O14787 897 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms