RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 EPB42P16452 691 aa5.71□□□□□ -1.5
PABPC1-212ENST00000519622 NPR3P17342 541 aa5.71□□□□□ -1.5
PABPC1-212ENST00000519622 GNAI1P63096 354 aa5.71□□□□□ -1.5
PABPC1-212ENST00000519622 NUCB1Q02818 461 aa5.71□□□□□ -1.5
PABPC1-212ENST00000519622 COL9A3Q14050 684 aaPredicted RBP5.71□□□□□ -1.5
PABPC1-212ENST00000519622 TRIP4Q15650 581 aaPredicted RBP5.71□□□□□ -1.5
PABPC1-212ENST00000519622 ECM1Q16610 540 aa5.71□□□□□ -1.5
PABPC1-212ENST00000519622 C8orf86Q6ZUL3 223 aa5.71□□□□□ -1.5
PABPC1-212ENST00000519622 CMTR1Q8N1G2 835 aaKnown RBP5.71□□□□□ -1.5
PABPC1-212ENST00000519622 EDEM1Q92611 657 aa5.71□□□□□ -1.5
PABPC1-212ENST00000519622 ANTXR1Q9H6X2 564 aa5.71□□□□□ -1.5
PABPC1-212ENST00000519622 DDX19BQ9UMR2 479 aa5.71□□□□□ -1.5
PABPC1-212ENST00000519622 RTCBQ9Y3I0 505 aaKnown RBP5.71□□□□□ -1.5
PABPC1-212ENST00000519622 STARD13Q9Y3M8 1113 aa5.71□□□□□ -1.5
PABPC1-212ENST00000519622 CEMIPQ8WUJ3 1361 aa5.7□□□□□ -1.5
PABPC1-212ENST00000519622 ABCC6O95255 1503 aa5.7□□□□□ -1.5
PABPC1-212ENST00000519622 K7ELQ4 463 aaPredicted RBP5.7□□□□□ -1.5
PABPC1-212ENST00000519622 PPM1GO15355 546 aaPredicted RBP5.7□□□□□ -1.5
PABPC1-212ENST00000519622 FZD6O60353 706 aa5.7□□□□□ -1.5
PABPC1-212ENST00000519622 CANXP27824 592 aaKnown RBP5.7□□□□□ -1.5
PABPC1-212ENST00000519622 KCNQ4P56696 695 aa5.7□□□□□ -1.5
PABPC1-212ENST00000519622 ARHGAP4P98171 946 aa5.7□□□□□ -1.5
PABPC1-212ENST00000519622 DNM1Q05193 864 aaKnown RBP5.7□□□□□ -1.5
PABPC1-212ENST00000519622 SPEM2Q0P670 501 aa5.7□□□□□ -1.5
PABPC1-212ENST00000519622 MTHFSDQ2M296 383 aaKnown RBP5.7□□□□□ -1.5
PABPC1-212ENST00000519622 TWISTNBQ3B726 338 aaPredicted RBP5.7□□□□□ -1.5
PABPC1-212ENST00000519622 SULT6B1Q6IMI4 303 aa5.7□□□□□ -1.5
PABPC1-212ENST00000519622 KRT25Q7Z3Z0 450 aa5.7□□□□□ -1.5
PABPC1-212ENST00000519622 PNNQ9H307 717 aaKnown RBP5.7□□□□□ -1.5
PABPC1-212ENST00000519622 CCDC87Q9NVE4 849 aa5.7□□□□□ -1.5
PABPC1-212ENST00000519622 BIN2Q9UBW5 565 aaPredicted RBP5.7□□□□□ -1.5
PABPC1-212ENST00000519622 KCNMB2Q9Y691 235 aa5.7□□□□□ -1.5
PABPC1-212ENST00000519622 NPHP4O75161 1426 aaPredicted RBP5.7□□□□□ -1.5
PABPC1-212ENST00000519622 PXDNLA1KZ92 1463 aa5.7□□□□□ -1.5
PABPC1-212ENST00000519622 C5P01031 1676 aa5.69□□□□□ -1.5
PABPC1-212ENST00000519622 A6NHS1 94 aa5.69□□□□□ -1.5
PABPC1-212ENST00000519622 ADARB2-AS1A8MUL3 147 aa5.69□□□□□ -1.5
PABPC1-212ENST00000519622 PATL2C9JE40 543 aaKnown RBP5.69□□□□□ -1.5
PABPC1-212ENST00000519622 PIK3R2O00459 728 aa5.69□□□□□ -1.5
PABPC1-212ENST00000519622 SIN3BO75182 1162 aa5.69□□□□□ -1.5
PABPC1-212ENST00000519622 PDGFAP04085 211 aa5.69□□□□□ -1.5
PABPC1-212ENST00000519622 ITGB7P26010 798 aa5.69□□□□□ -1.5
PABPC1-212ENST00000519622 HOXC9P31274 260 aa5.69□□□□□ -1.5
PABPC1-212ENST00000519622 DDIT3P35638 169 aa5.69□□□□□ -1.5
PABPC1-212ENST00000519622 INTS3Q68E01 1043 aaKnown RBP5.69□□□□□ -1.5
PABPC1-212ENST00000519622 MCM10Q7L590 875 aa5.69□□□□□ -1.5
PABPC1-212ENST00000519622 ITPRIPQ8IWB1 547 aa5.69□□□□□ -1.5
PABPC1-212ENST00000519622 THEMISQ8N1K5 641 aaPredicted RBP5.69□□□□□ -1.5
PABPC1-212ENST00000519622 BHMTQ93088 406 aa5.69□□□□□ -1.5
PABPC1-212ENST00000519622 KIF2CQ99661 725 aa5.69□□□□□ -1.5
PABPC1-212ENST00000519622 RWDD1Q9H446 243 aaPredicted RBP5.69□□□□□ -1.5
PABPC1-212ENST00000519622 NOP53Q9NZM5 478 aaKnown RBP5.69□□□□□ -1.5
PABPC1-212ENST00000519622 POLIQ9UNA4 740 aa5.69□□□□□ -1.5
PABPC1-212ENST00000519622 LAS1LQ9Y4W2 734 aaKnown RBP5.69□□□□□ -1.5
PABPC1-212ENST00000519622 EID1Q9Y6B2 187 aa5.69□□□□□ -1.5
PABPC1-212ENST00000519622 CACNA1FO60840 1977 aa5.69□□□□□ -1.5
PABPC1-212ENST00000519622 SALL3Q9BXA9 1300 aa5.69□□□□□ -1.5
PABPC1-212ENST00000519622 PKD1L3Q7Z443 1732 aa5.68□□□□□ -1.5
PABPC1-212ENST00000519622 ABCA3Q99758 1704 aa5.68□□□□□ -1.5
PABPC1-212ENST00000519622 SETD1BQ9UPS6 1966 aaKnown RBP5.68□□□□□ -1.5
PABPC1-212ENST00000519622 M0R082 166 aa5.68□□□□□ -1.5
PABPC1-212ENST00000519622 XYLBO75191 536 aa5.68□□□□□ -1.5
PABPC1-212ENST00000519622 ALBP02768 609 aa5.68□□□□□ -1.5
PABPC1-212ENST00000519622 NFKB1P19838 968 aa5.68□□□□□ -1.5
PABPC1-212ENST00000519622 ALAS2P22557 587 aa5.68□□□□□ -1.5
PABPC1-212ENST00000519622 CALD1Q05682 793 aaKnown RBP5.68□□□□□ -1.5
PABPC1-212ENST00000519622 LMOD3Q0VAK6 560 aa5.68□□□□□ -1.5
PABPC1-212ENST00000519622 XP32Q5T750 250 aa5.68□□□□□ -1.5
PABPC1-212ENST00000519622 ALKBH2Q6NS38 261 aa5.68□□□□□ -1.5
PABPC1-212ENST00000519622 G2E3Q7L622 706 aa5.68□□□□□ -1.5
PABPC1-212ENST00000519622 FTSJ3Q8IY81 847 aaKnown RBP5.68□□□□□ -1.5
PABPC1-212ENST00000519622 ZNF417Q8TAU3 575 aa5.68□□□□□ -1.5
PABPC1-212ENST00000519622 PIK3R5Q8WYR1 880 aa5.68□□□□□ -1.5
PABPC1-212ENST00000519622 TNFRSF25Q93038 417 aa5.68□□□□□ -1.5
PABPC1-212ENST00000519622 ZNF587Q96SQ5 575 aaPredicted RBP5.68□□□□□ -1.5
PABPC1-212ENST00000519622 PARP4Q9UKK3 1724 aaKnown RBP5.68□□□□□ -1.5
PABPC1-212ENST00000519622 MAP3K5Q99683 1374 aa5.67□□□□□ -1.5
PABPC1-212ENST00000519622 OVOS2A0A0G2JMS6 1433 aa5.67□□□□□ -1.5
PABPC1-212ENST00000519622 MRC1P22897 1456 aa5.67□□□□□ -1.5
PABPC1-212ENST00000519622 C1orf167Q5SNV9 1468 aa5.67□□□□□ -1.5
PABPC1-212ENST00000519622 UBAP1LF5GYI3 381 aa5.67□□□□□ -1.5
PABPC1-212ENST00000519622 FAM229AH3BQW9 127 aa5.67□□□□□ -1.5
PABPC1-212ENST00000519622 IPO8O15397 1037 aaKnown RBP5.67□□□□□ -1.5
PABPC1-212ENST00000519622 SASH3O75995 380 aa5.67□□□□□ -1.5
PABPC1-212ENST00000519622 GSPT1P15170 499 aaKnown RBP5.67□□□□□ -1.5
PABPC1-212ENST00000519622 MZF1P28698 734 aaPredicted RBP5.67□□□□□ -1.5
PABPC1-212ENST00000519622 DEKP35659 375 aaKnown RBP5.67□□□□□ -1.5
PABPC1-212ENST00000519622 CCINQ13939 588 aa5.67□□□□□ -1.5
PABPC1-212ENST00000519622 DOC2BQ14184 412 aa5.67□□□□□ -1.5
PABPC1-212ENST00000519622 CHD1LQ86WJ1 897 aa5.67□□□□□ -1.5
PABPC1-212ENST00000519622 MICALL1Q8N3F8 863 aa5.67□□□□□ -1.5
PABPC1-212ENST00000519622 IL17REQ8NFR9 667 aa5.67□□□□□ -1.5
PABPC1-212ENST00000519622 PNMA5Q96PV4 448 aa5.67□□□□□ -1.5
PABPC1-212ENST00000519622 GSX2Q9BZM3 304 aa5.67□□□□□ -1.5
PABPC1-212ENST00000519622 FAM13BQ9NYF5 915 aa5.67□□□□□ -1.5
PABPC1-212ENST00000519622 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.67□□□□□ -1.5
PABPC1-212ENST00000519622 SHANK3Q9BYB0 1731 aa5.67□□□□□ -1.5
PABPC1-212ENST00000519622 SCN11AQ9UI33 1791 aa5.67□□□□□ -1.5
PABPC1-212ENST00000519622 HEG1Q9ULI3 1381 aa5.67□□□□□ -1.5
PABPC1-212ENST00000519622 ELL2O00472 640 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms