RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 PPP4R2Q9NY27 417 aa6□□□□□ -1.45
CSMD3-209ENST00000519485 GPN3Q9UHW5 284 aaPredicted RBP6□□□□□ -1.45
CSMD3-209ENST00000519485 MAPK8IP1Q9UQF2 711 aa6□□□□□ -1.45
CSMD3-209ENST00000519485 ZNF865P0CJ78 1059 aaPredicted RBP5.99□□□□□ -1.45
CSMD3-209ENST00000519485 FYB2Q5VWT5 728 aa5.99□□□□□ -1.45
CSMD3-209ENST00000519485 LILRA6Q6PI73 481 aa5.99□□□□□ -1.45
CSMD3-209ENST00000519485 AMIGO3Q86WK7 504 aa5.99□□□□□ -1.45
CSMD3-209ENST00000519485 ANKLE2Q86XL3 938 aa5.99□□□□□ -1.45
CSMD3-209ENST00000519485 EPS8L3Q8TE67 593 aaKnown RBP5.99□□□□□ -1.45
CSMD3-209ENST00000519485 GNAT3A8MTJ3 354 aa5.98□□□□□ -1.45
CSMD3-209ENST00000519485 FANCGO15287 622 aa5.98□□□□□ -1.45
CSMD3-209ENST00000519485 EOMESO95936 686 aa5.98□□□□□ -1.45
CSMD3-209ENST00000519485 GDNFP39905 211 aa5.98□□□□□ -1.45
CSMD3-209ENST00000519485 FCGRTP55899 365 aa5.98□□□□□ -1.45
CSMD3-209ENST00000519485 MAP1SQ66K74 1059 aaPredicted RBP5.98□□□□□ -1.45
CSMD3-209ENST00000519485 SYDE1Q6ZW31 735 aaPredicted RBP5.98□□□□□ -1.45
CSMD3-209ENST00000519485 CYFIP1Q7L576 1253 aa5.98□□□□□ -1.45
CSMD3-209ENST00000519485 GPBAR1Q8TDU6 330 aa5.98□□□□□ -1.45
CSMD3-209ENST00000519485 KIRREL1Q96J84 757 aa5.98□□□□□ -1.45
CSMD3-209ENST00000519485 RBCK1Q9BYM8 510 aa5.98□□□□□ -1.45
CSMD3-209ENST00000519485 NIF3L1Q9GZT8 377 aa5.98□□□□□ -1.45
CSMD3-209ENST00000519485 C19orf73Q9NVV2 129 aa5.98□□□□□ -1.45
CSMD3-209ENST00000519485 SUPT5HO00267 1087 aaKnown RBP5.97□□□□□ -1.45
CSMD3-209ENST00000519485 SERPINB4P48594 390 aa5.97□□□□□ -1.45
CSMD3-209ENST00000519485 PRR23BQ6ZRT6 265 aa5.97□□□□□ -1.45
CSMD3-209ENST00000519485 TTLL10Q6ZVT0 673 aa5.97□□□□□ -1.45
CSMD3-209ENST00000519485 KCT2Q8NC54 265 aa5.97□□□□□ -1.45
CSMD3-209ENST00000519485 ARID3AQ99856 593 aa5.97□□□□□ -1.45
CSMD3-209ENST00000519485 FOXQ1Q9C009 403 aa5.97□□□□□ -1.45
CSMD3-209ENST00000519485 SEMA3GQ9NS98 782 aa5.97□□□□□ -1.45
CSMD3-209ENST00000519485 NCANO14594 1321 aa5.97□□□□□ -1.45
CSMD3-209ENST00000519485 CARNS1A5YM72 827 aa5.96□□□□□ -1.46
CSMD3-209ENST00000519485 TRIM37O94972 964 aa5.96□□□□□ -1.46
CSMD3-209ENST00000519485 ZSCAN22P10073 491 aaPredicted RBP5.96□□□□□ -1.46
CSMD3-209ENST00000519485 TMEM67Q5HYA8 995 aa5.96□□□□□ -1.46
CSMD3-209ENST00000519485 ZBTB37Q5TC79 503 aa5.96□□□□□ -1.46
CSMD3-209ENST00000519485 NPAS4Q8IUM7 802 aa5.96□□□□□ -1.46
CSMD3-209ENST00000519485 FBXO15Q8NCQ5 510 aaPredicted RBP5.96□□□□□ -1.46
CSMD3-209ENST00000519485 CCDC120Q96HB5 630 aa5.96□□□□□ -1.46
CSMD3-209ENST00000519485 BCO2Q9BYV7 579 aa5.96□□□□□ -1.46
CSMD3-209ENST00000519485 C1orf115Q9H7X2 142 aa5.96□□□□□ -1.46
CSMD3-209ENST00000519485 PRDM5Q9NQX1 630 aaPredicted RBP5.96□□□□□ -1.46
CSMD3-209ENST00000519485 NLRP2Q9NX02 1062 aa5.96□□□□□ -1.46
CSMD3-209ENST00000519485 PRRG2O14669 202 aa5.95□□□□□ -1.46
CSMD3-209ENST00000519485 LRIG2O94898 1065 aa5.95□□□□□ -1.46
CSMD3-209ENST00000519485 PPM1JQ5JR12 505 aa5.95□□□□□ -1.46
CSMD3-209ENST00000519485 MPZL3Q6UWV2 235 aa5.95□□□□□ -1.46
CSMD3-209ENST00000519485 ANKRD24Q8TF21 1146 aa5.95□□□□□ -1.46
CSMD3-209ENST00000519485 NECAB3Q96P71 396 aaPredicted RBP5.95□□□□□ -1.46
CSMD3-209ENST00000519485 NFIBO00712 420 aa5.94□□□□□ -1.46
CSMD3-209ENST00000519485 C1QTNF9P0C862 333 aa5.94□□□□□ -1.46
CSMD3-209ENST00000519485 MED14OSP0DP75 135 aa5.94□□□□□ -1.46
CSMD3-209ENST00000519485 CAP2P40123 477 aa5.94□□□□□ -1.46
CSMD3-209ENST00000519485 KRTAP5-3Q6L8H2 238 aa5.94□□□□□ -1.46
CSMD3-209ENST00000519485 UBE3DQ7Z6J8 389 aa5.94□□□□□ -1.46
CSMD3-209ENST00000519485 TXNDC2Q86VQ3 553 aa5.94□□□□□ -1.46
CSMD3-209ENST00000519485 ACSBG1Q96GR2 724 aa5.94□□□□□ -1.46
CSMD3-209ENST00000519485 CARS2Q9HA77 564 aaKnown RBP5.94□□□□□ -1.46
CSMD3-209ENST00000519485 CD320Q9NPF0 282 aa5.94□□□□□ -1.46
CSMD3-209ENST00000519485 SAMM50Q9Y512 469 aa5.94□□□□□ -1.46
CSMD3-209ENST00000519485 BMP6P22004 513 aa5.93□□□□□ -1.46
CSMD3-209ENST00000519485 ARMCX6Q7L4S7 300 aa5.93□□□□□ -1.46
CSMD3-209ENST00000519485 THAP5Q7Z6K1 395 aa5.93□□□□□ -1.46
CSMD3-209ENST00000519485 C3orf58Q8NDZ4 430 aa5.93□□□□□ -1.46
CSMD3-209ENST00000519485 KRTAP9-3Q9BYQ3 159 aa5.93□□□□□ -1.46
CSMD3-209ENST00000519485 PPM1HQ9ULR3 514 aa5.93□□□□□ -1.46
CSMD3-209ENST00000519485 TIMELESSQ9UNS1 1208 aa5.93□□□□□ -1.46
CSMD3-209ENST00000519485 SLITRK5O94991 958 aa5.92□□□□□ -1.46
CSMD3-209ENST00000519485 CDC37L1Q7L3B6 337 aa5.92□□□□□ -1.46
CSMD3-209ENST00000519485 MFSD4AQ8N468 514 aa5.92□□□□□ -1.46
CSMD3-209ENST00000519485 TMC1Q8TDI8 760 aa5.92□□□□□ -1.46
CSMD3-209ENST00000519485 HSPA12BQ96MM6 686 aa5.92□□□□□ -1.46
CSMD3-209ENST00000519485 CEP44Q9C0F1 390 aa5.92□□□□□ -1.46
CSMD3-209ENST00000519485 ATP13A1Q9HD20 1204 aa5.92□□□□□ -1.46
CSMD3-209ENST00000519485 ST14Q9Y5Y6 855 aa5.92□□□□□ -1.46
CSMD3-209ENST00000519485 B8ZZF3 427 aa5.91□□□□□ -1.46
CSMD3-209ENST00000519485 ENC1O14682 589 aa5.91□□□□□ -1.46
CSMD3-209ENST00000519485 SRFP11831 508 aa5.91□□□□□ -1.46
CSMD3-209ENST00000519485 GLDCP23378 1020 aa5.91□□□□□ -1.46
CSMD3-209ENST00000519485 LRRC14Q15048 493 aa5.91□□□□□ -1.46
CSMD3-209ENST00000519485 PI16Q6UXB8 463 aa5.91□□□□□ -1.46
CSMD3-209ENST00000519485 MPRIPQ6WCQ1 1025 aa5.91□□□□□ -1.46
CSMD3-209ENST00000519485 C12orf40Q86WS4 652 aa5.91□□□□□ -1.46
CSMD3-209ENST00000519485 ZNF507Q8TCN5 953 aa5.91□□□□□ -1.46
CSMD3-209ENST00000519485 COX4I2Q96KJ9 171 aa5.91□□□□□ -1.46
CSMD3-209ENST00000519485 SRCIN1Q9C0H9 1055 aa5.91□□□□□ -1.46
CSMD3-209ENST00000519485 CBX8Q9HC52 389 aa5.91□□□□□ -1.46
CSMD3-209ENST00000519485 AKAP2Q9Y2D5 859 aa5.91□□□□□ -1.46
CSMD3-209ENST00000519485 CAPN6Q9Y6Q1 641 aa5.91□□□□□ -1.46
CSMD3-209ENST00000519485 DCDC2CA8MYV0 355 aa5.9□□□□□ -1.46
CSMD3-209ENST00000519485 SFRP5Q5T4F7 317 aa5.9□□□□□ -1.46
CSMD3-209ENST00000519485 NXPE4Q6UWF7 544 aa5.9□□□□□ -1.46
CSMD3-209ENST00000519485 MFSD2AQ8NA29 543 aa5.9□□□□□ -1.46
CSMD3-209ENST00000519485 GRIN3AQ8TCU5 1115 aa5.9□□□□□ -1.46
CSMD3-209ENST00000519485 NSUN3Q9H649 340 aaKnown RBP5.9□□□□□ -1.46
CSMD3-209ENST00000519485 PICK1Q9NRD5 415 aa5.9□□□□□ -1.46
CSMD3-209ENST00000519485 CSADQ9Y600 493 aa5.9□□□□□ -1.46
CSMD3-209ENST00000519485 PRR33A8MZF0 331 aa5.89□□□□□ -1.47
CSMD3-209ENST00000519485 FAM155AB1AL88 458 aaPredicted RBP5.89□□□□□ -1.47
CSMD3-209ENST00000519485 TMEM253P0C7T8 217 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms