RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 USP17L8P0C7I0 530 aa8.58□□□□□ -1.04
MRPS28-205ENST00000519386 CASTP20810 708 aaKnown RBP8.58□□□□□ -1.04
MRPS28-205ENST00000519386 ADD2P35612 726 aa8.58□□□□□ -1.04
MRPS28-205ENST00000519386 ZAP70P43403 619 aa8.58□□□□□ -1.04
MRPS28-205ENST00000519386 ZNF280AP59817 542 aaPredicted RBP8.58□□□□□ -1.04
MRPS28-205ENST00000519386 PLCB2Q00722 1185 aa8.58□□□□□ -1.04
MRPS28-205ENST00000519386 SCARF1Q14162 830 aa8.58□□□□□ -1.04
MRPS28-205ENST00000519386 TBC1D10BQ4KMP7 808 aaPredicted RBP8.58□□□□□ -1.04
MRPS28-205ENST00000519386 EAPPQ56P03 285 aaPredicted RBP8.58□□□□□ -1.04
MRPS28-205ENST00000519386 PPP4R3BQ5MIZ7 849 aa8.58□□□□□ -1.04
MRPS28-205ENST00000519386 SAMD7Q7Z3H4 446 aa8.58□□□□□ -1.04
MRPS28-205ENST00000519386 KIAA0825Q8IV33 1275 aa8.58□□□□□ -1.04
MRPS28-205ENST00000519386 FBXL16Q8N461 479 aa8.58□□□□□ -1.04
MRPS28-205ENST00000519386 SPATA5Q8NB90 893 aa8.58□□□□□ -1.04
MRPS28-205ENST00000519386 WDR66Q8TBY9 1149 aa8.58□□□□□ -1.04
MRPS28-205ENST00000519386 TBC1D22AQ8WUA7 517 aa8.58□□□□□ -1.04
MRPS28-205ENST00000519386 TMX3Q96JJ7 454 aa8.58□□□□□ -1.04
MRPS28-205ENST00000519386 GBP4Q96PP9 640 aa8.58□□□□□ -1.04
MRPS28-205ENST00000519386 ADARB2Q9NS39 739 aaKnown RBP8.58□□□□□ -1.04
MRPS28-205ENST00000519386 DENND2AQ9ULE3 1009 aa8.58□□□□□ -1.04
MRPS28-205ENST00000519386 LIMCH1Q9UPQ0 1083 aa8.58□□□□□ -1.04
MRPS28-205ENST00000519386 POLR2AP24928 1970 aaKnown RBP8.58□□□□□ -1.04
MRPS28-205ENST00000519386 ADAMTSL1Q8N6G6 1762 aa8.58□□□□□ -1.04
MRPS28-205ENST00000519386 NAV1Q8NEY1 1877 aa8.57□□□□□ -1.04
MRPS28-205ENST00000519386 DDX60LQ5H9U9 1706 aaKnown RBP8.57□□□□□ -1.04
MRPS28-205ENST00000519386 DPYSL4O14531 572 aa8.57□□□□□ -1.04
MRPS28-205ENST00000519386 CYP2E1P05181 493 aaPredicted RBP8.57□□□□□ -1.04
MRPS28-205ENST00000519386 HSPD1P10809 573 aaKnown RBP8.57□□□□□ -1.04
MRPS28-205ENST00000519386 FOSBP53539 338 aa8.57□□□□□ -1.04
MRPS28-205ENST00000519386 HIRAP54198 1017 aaPredicted RBP8.57□□□□□ -1.04
MRPS28-205ENST00000519386 MAP3K12Q12852 859 aa8.57□□□□□ -1.04
MRPS28-205ENST00000519386 KIF4BQ2VIQ3 1234 aa8.57□□□□□ -1.04
MRPS28-205ENST00000519386 RBM26Q5T8P6 1007 aaKnown RBP8.57□□□□□ -1.04
MRPS28-205ENST00000519386 BLOC1S2Q6QNY1 142 aa8.57□□□□□ -1.04
MRPS28-205ENST00000519386 CHMP4CQ96CF2 233 aa8.57□□□□□ -1.04
MRPS28-205ENST00000519386 JAKMIP1Q96N16 626 aaKnown RBP8.57□□□□□ -1.04
MRPS28-205ENST00000519386 UPF3BQ9BZI7 483 aaKnown RBP8.57□□□□□ -1.04
MRPS28-205ENST00000519386 TCHHQ07283 1943 aa8.56□□□□□ -1.04
MRPS28-205ENST00000519386 MYH2Q9UKX2 1941 aa8.56□□□□□ -1.04
MRPS28-205ENST00000519386 TCRBV5S4A2TA0A5A2 114 aa8.56□□□□□ -1.04
MRPS28-205ENST00000519386 PDE6AP16499 860 aa8.56□□□□□ -1.04
MRPS28-205ENST00000519386 GNAT2P19087 354 aa8.56□□□□□ -1.04
MRPS28-205ENST00000519386 RPS6KB1P23443 525 aa8.56□□□□□ -1.04
MRPS28-205ENST00000519386 PRDX5P30044 214 aa8.56□□□□□ -1.04
MRPS28-205ENST00000519386 AK2P54819 239 aa8.56□□□□□ -1.04
MRPS28-205ENST00000519386 LSM11P83369 360 aaKnown RBP eCLIP8.56□□□□□ -1.04
MRPS28-205ENST00000519386 E2F4Q16254 413 aa8.56□□□□□ -1.04
MRPS28-205ENST00000519386 USP50Q70EL3 339 aaPredicted RBP8.56□□□□□ -1.04
MRPS28-205ENST00000519386 PNMA8AQ86V59 439 aaPredicted RBP8.56□□□□□ -1.04
MRPS28-205ENST00000519386 LDHDQ86WU2 507 aa8.56□□□□□ -1.04
MRPS28-205ENST00000519386 OGFOD1Q8N543 542 aa8.56□□□□□ -1.04
MRPS28-205ENST00000519386 AGXT2Q9BYV1 514 aa8.56□□□□□ -1.04
MRPS28-205ENST00000519386 MYOZ2Q9NPC6 264 aa8.56□□□□□ -1.04
MRPS28-205ENST00000519386 PDRG1Q9NUG6 133 aa8.56□□□□□ -1.04
MRPS28-205ENST00000519386 HDAC9Q9UKV0 1011 aa8.56□□□□□ -1.04
MRPS28-205ENST00000519386 TTF2Q9UNY4 1162 aaKnown RBP8.56□□□□□ -1.04
MRPS28-205ENST00000519386 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.56□□□□□ -1.04
MRPS28-205ENST00000519386 PCDHAC2Q9Y5I4 1007 aa8.56□□□□□ -1.04
MRPS28-205ENST00000519386 NDUFB9Q9Y6M9 179 aa8.56□□□□□ -1.04
MRPS28-205ENST00000519386 BAZ2AQ9UIF9 1905 aaKnown RBP8.56□□□□□ -1.04
MRPS28-205ENST00000519386 ASTN2O75129 1339 aaPredicted RBP8.55□□□□□ -1.04
MRPS28-205ENST00000519386 SALL1Q9NSC2 1324 aa8.55□□□□□ -1.04
MRPS28-205ENST00000519386 ECM29Q5VYK3 1845 aa8.55□□□□□ -1.04
MRPS28-205ENST00000519386 GPAA1O43292 621 aa8.55□□□□□ -1.04
MRPS28-205ENST00000519386 TOMM70O94826 608 aa8.55□□□□□ -1.04
MRPS28-205ENST00000519386 LDHBP07195 334 aaKnown RBP8.55□□□□□ -1.04
MRPS28-205ENST00000519386 CYP21A2P08686 494 aa8.55□□□□□ -1.04
MRPS28-205ENST00000519386 NT5C2P49902 561 aa8.55□□□□□ -1.04
MRPS28-205ENST00000519386 MMRN1Q13201 1228 aa8.55□□□□□ -1.04
MRPS28-205ENST00000519386 ALX1Q15699 326 aa8.55□□□□□ -1.04
MRPS28-205ENST00000519386 IMMTQ16891 758 aaKnown RBP8.55□□□□□ -1.04
MRPS28-205ENST00000519386 ADCK5Q3MIX3 580 aa8.55□□□□□ -1.04
MRPS28-205ENST00000519386 CFAP100Q494V2 611 aa8.55□□□□□ -1.04
MRPS28-205ENST00000519386 SLC9C2Q5TAH2 1124 aa8.55□□□□□ -1.04
MRPS28-205ENST00000519386 ZNF454Q8N9F8 522 aa8.55□□□□□ -1.04
MRPS28-205ENST00000519386 RBM46Q8TBY0 533 aaKnown RBP8.55□□□□□ -1.04
MRPS28-205ENST00000519386 OSBP2Q969R2 916 aa8.55□□□□□ -1.04
MRPS28-205ENST00000519386 WDR70Q9NW82 654 aa8.55□□□□□ -1.04
MRPS28-205ENST00000519386 ABCF2Q9UG63 623 aa8.55□□□□□ -1.04
MRPS28-205ENST00000519386 SUGT1Q9Y2Z0 365 aa8.55□□□□□ -1.04
MRPS28-205ENST00000519386 M0R2C6 588 aa8.54□□□□□ -1.04
MRPS28-205ENST00000519386 WNT10BO00744 389 aa8.54□□□□□ -1.04
MRPS28-205ENST00000519386 ARHGAP33O14559 1287 aa8.54□□□□□ -1.04
MRPS28-205ENST00000519386 IDH1O75874 414 aaKnown RBP8.54□□□□□ -1.04
MRPS28-205ENST00000519386 CRKP46108 304 aa8.54□□□□□ -1.04
MRPS28-205ENST00000519386 MMP14P50281 582 aa8.54□□□□□ -1.04
MRPS28-205ENST00000519386 RBM5P52756 815 aaKnown RBP eCLIP8.54□□□□□ -1.04
MRPS28-205ENST00000519386 DLGAP5Q15398 846 aa8.54□□□□□ -1.04
MRPS28-205ENST00000519386 DIXDC1Q155Q3 683 aa8.54□□□□□ -1.04
MRPS28-205ENST00000519386 NBPF9Q3BBW0 867 aa8.54□□□□□ -1.04
MRPS28-205ENST00000519386 MAP1SQ66K74 1059 aaPredicted RBP8.54□□□□□ -1.04
MRPS28-205ENST00000519386 SPTY2D1Q68D10 685 aaPredicted RBP8.54□□□□□ -1.04
MRPS28-205ENST00000519386 CCDC129Q6ZRS4 1044 aa8.54□□□□□ -1.04
MRPS28-205ENST00000519386 ZGPATQ8N5A5 531 aaKnown RBP8.54□□□□□ -1.04
MRPS28-205ENST00000519386 SMC1BQ8NDV3 1235 aa8.54□□□□□ -1.04
MRPS28-205ENST00000519386 ZBED3Q96IU2 234 aaPredicted RBP8.54□□□□□ -1.04
MRPS28-205ENST00000519386 NEK1Q96PY6 1258 aa8.54□□□□□ -1.04
MRPS28-205ENST00000519386 SEC62Q99442 399 aaKnown RBP8.54□□□□□ -1.04
MRPS28-205ENST00000519386 MTA3Q9BTC8 594 aa8.54□□□□□ -1.04
MRPS28-205ENST00000519386 PIH1D3Q9NQM4 214 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms