RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	FASTKD5	Q7L8L6	764 aa	Known RBP	29.29	■■■□□ 2.28
CNOT7-204	ENST00000518885	ANKRD23	Q86SG2	305 aa		29.29	■■■□□ 2.28
CNOT7-204	ENST00000518885	FAM43A	Q8N2R8	423 aa		29.29	■■■□□ 2.28
CNOT7-204	ENST00000518885	HAUS7	Q99871	368 aa		29.29	■■■□□ 2.28
CNOT7-204	ENST00000518885	BOLA2	Q9H3K6	86 aa		29.29	■■■□□ 2.28
CNOT7-204	ENST00000518885	R3HDML	Q9H3Y0	253 aa		29.29	■■■□□ 2.28
CNOT7-204	ENST00000518885	ZBTB47	Q9UFB7	747 aa	Predicted RBP	29.29	■■■□□ 2.28
CNOT7-204	ENST00000518885	MAGEB6P1	A0A0J9YX57	407 aa		29.28	■■■□□ 2.28
CNOT7-204	ENST00000518885	BTBD19	C9JJ37	291 aa		29.28	■■■□□ 2.28
CNOT7-204	ENST00000518885	PDE6A	P16499	860 aa		29.28	■■■□□ 2.28
CNOT7-204	ENST00000518885	DYNLL1	P63167	89 aa	Known RBP	29.28	■■■□□ 2.28
CNOT7-204	ENST00000518885	SP3	Q02447	781 aa		29.28	■■■□□ 2.28
CNOT7-204	ENST00000518885	ZSCAN25	Q6NSZ9	544 aa		29.28	■■■□□ 2.28
CNOT7-204	ENST00000518885	ECHDC1	Q9NTX5	307 aa		29.28	■■■□□ 2.28
CNOT7-204	ENST00000518885	CRNKL1	Q9BZJ0	848 aa	Known RBP	29.27	■■■□□ 2.28
CNOT7-204	ENST00000518885	DOCK1	Q14185	1865 aa		29.26	■■■□□ 2.27
CNOT7-204	ENST00000518885	MYO5A	Q9Y4I1	1855 aa	Known RBP	29.26	■■■□□ 2.27
CNOT7-204	ENST00000518885	SMARCA5	O60264	1052 aa	Predicted RBP	29.26	■■■□□ 2.27
CNOT7-204	ENST00000518885	GINM1	Q9NU53	330 aa		29.26	■■■□□ 2.27
CNOT7-204	ENST00000518885	CAP2	P40123	477 aa		29.25	■■■□□ 2.27
CNOT7-204	ENST00000518885	TTC6	Q86TZ1	520 aa		29.25	■■■□□ 2.27
CNOT7-204	ENST00000518885	CRBN	Q96SW2	442 aa		29.25	■■■□□ 2.27
CNOT7-204	ENST00000518885	PALD1	Q9ULE6	856 aa		29.25	■■■□□ 2.27
CNOT7-204	ENST00000518885	AFG3L2	Q9Y4W6	797 aa		29.25	■■■□□ 2.27
CNOT7-204	ENST00000518885	PCDHB15	Q9Y5E8	787 aa		29.25	■■■□□ 2.27
CNOT7-204	ENST00000518885	FOCAD	Q5VW36	1801 aa		29.24	■■■□□ 2.27
CNOT7-204	ENST00000518885	ZNF532	Q9HCE3	1301 aa		29.24	■■■□□ 2.27
CNOT7-204	ENST00000518885	TLR2	O60603	784 aa		29.24	■■■□□ 2.27
CNOT7-204	ENST00000518885	FBXO46	Q6PJ61	603 aa	Predicted RBP	29.24	■■■□□ 2.27
CNOT7-204	ENST00000518885	AS3MT	Q9HBK9	375 aa		29.24	■■■□□ 2.27
CNOT7-204	ENST00000518885	SAP30BP	Q9UHR5	308 aa	Known RBP	29.24	■■■□□ 2.27
CNOT7-204	ENST00000518885		A0A0G2JLL6	359 aa	Predicted RBP	29.23	■■■□□ 2.27
CNOT7-204	ENST00000518885	FAM196B	A6NMK8	535 aa		29.23	■■■□□ 2.27
CNOT7-204	ENST00000518885	PDHX	O00330	501 aa		29.23	■■■□□ 2.27
CNOT7-204	ENST00000518885	KIF22	Q14807	665 aa		29.23	■■■□□ 2.27
CNOT7-204	ENST00000518885	PRRT2	Q7Z6L0	340 aa	Predicted RBP	29.23	■■■□□ 2.27
CNOT7-204	ENST00000518885	METTL16	Q86W50	562 aa	Known RBP	29.23	■■■□□ 2.27
CNOT7-204	ENST00000518885	PARK7	Q99497	189 aa	Known RBP	29.23	■■■□□ 2.27
CNOT7-204	ENST00000518885	ASNS	P08243	561 aa		29.22	■■■□□ 2.27
CNOT7-204	ENST00000518885	RIOK1	Q9BRS2	568 aa	Known RBP	29.22	■■■□□ 2.27
CNOT7-204	ENST00000518885	TRIM17	Q9Y577	477 aa		29.22	■■■□□ 2.27
CNOT7-204	ENST00000518885	TRIM75P	A6NK02	468 aa		29.21	■■■□□ 2.27
CNOT7-204	ENST00000518885	USP17L5	A8MUK1	530 aa		29.21	■■■□□ 2.27
CNOT7-204	ENST00000518885	EHD4	Q9H223	541 aa		29.21	■■■□□ 2.27
CNOT7-204	ENST00000518885	EFCC1	Q9HA90	598 aa		29.21	■■■□□ 2.27
CNOT7-204	ENST00000518885	SLC45A1	Q9Y2W3	748 aa		29.21	■■■□□ 2.27
CNOT7-204	ENST00000518885	ERC2	O15083	957 aa		29.2	■■■□□ 2.26
CNOT7-204	ENST00000518885	ADD2	P35612	726 aa		29.2	■■■□□ 2.26
CNOT7-204	ENST00000518885	LRRFIP1	Q32MZ4	808 aa	Known RBP	29.2	■■■□□ 2.26
CNOT7-204	ENST00000518885	GADL1	Q6ZQY3	521 aa		29.2	■■■□□ 2.26
CNOT7-204	ENST00000518885	ZNF280C	Q8ND82	737 aa		29.2	■■■□□ 2.26
CNOT7-204	ENST00000518885	CD99L2	Q8TCZ2	262 aa		29.2	■■■□□ 2.26
CNOT7-204	ENST00000518885	CDK5RAP2	Q96SN8	1893 aa		29.2	■■■□□ 2.26
CNOT7-204	ENST00000518885	TCRBV5S4A2T	A0A5A2	114 aa		29.19	■■■□□ 2.26
CNOT7-204	ENST00000518885	SLURP2	P0DP57	97 aa		29.19	■■■□□ 2.26
CNOT7-204	ENST00000518885	UBE3C	Q15386	1083 aa		29.19	■■■□□ 2.26
CNOT7-204	ENST00000518885	GCC1	Q96CN9	775 aa		29.19	■■■□□ 2.26
CNOT7-204	ENST00000518885	EDC3	Q96F86	508 aa	Known RBP	29.19	■■■□□ 2.26
CNOT7-204	ENST00000518885	DDRGK1	Q96HY6	314 aa		29.19	■■■□□ 2.26
CNOT7-204	ENST00000518885	SERPINB13	Q9UIV8	391 aa		29.19	■■■□□ 2.26
CNOT7-204	ENST00000518885	TTC41P	Q6P2S7	1318 aa		29.19	■■■□□ 2.26
CNOT7-204	ENST00000518885	POLR3D	P05423	398 aa	Predicted RBP	29.18	■■■□□ 2.26
CNOT7-204	ENST00000518885	OTOP1	Q7RTM1	612 aa		29.18	■■■□□ 2.26
CNOT7-204	ENST00000518885	TAOK2	Q9UL54	1235 aa		29.18	■■■□□ 2.26
CNOT7-204	ENST00000518885	HPS5	Q9UPZ3	1129 aa		29.18	■■■□□ 2.26
CNOT7-204	ENST00000518885	PABPC4	Q13310	644 aa	Known RBP eCLIP	29.17	■■■□□ 2.26
CNOT7-204	ENST00000518885	MOGS	Q13724	837 aa		29.17	■■■□□ 2.26
CNOT7-204	ENST00000518885	AMOTL1	Q8IY63	956 aa		29.17	■■■□□ 2.26
CNOT7-204	ENST00000518885	PROCA1	Q8NCQ7	364 aa	Predicted RBP	29.17	■■■□□ 2.26
CNOT7-204	ENST00000518885	PNMA3	Q9UL41	463 aa		29.17	■■■□□ 2.26
CNOT7-204	ENST00000518885	GNRH1	P01148	92 aa		29.16	■■■□□ 2.26
CNOT7-204	ENST00000518885	HDAC1	Q13547	482 aa	Predicted RBP	29.16	■■■□□ 2.26
CNOT7-204	ENST00000518885	SPP2	Q13103	211 aa		29.15	■■■□□ 2.26
CNOT7-204	ENST00000518885	WDR18	Q9BV38	432 aa		29.15	■■■□□ 2.26
CNOT7-204	ENST00000518885	ATP8A2	Q9NTI2	1148 aa		29.15	■■■□□ 2.26
CNOT7-204	ENST00000518885	MCM9	Q9NXL9	1143 aa		29.15	■■■□□ 2.26
CNOT7-204	ENST00000518885	AGTPBP1	Q9UPW5	1226 aa		29.15	■■■□□ 2.26
CNOT7-204	ENST00000518885	GPAT2	Q6NUI2	795 aa		29.14	■■■□□ 2.26
CNOT7-204	ENST00000518885	LCORL	Q8N3X6	602 aa		29.14	■■■□□ 2.26
CNOT7-204	ENST00000518885	DNAJC18	Q9H819	358 aa		29.14	■■■□□ 2.26
CNOT7-204	ENST00000518885	MYH1	P12882	1939 aa		29.14	■■■□□ 2.25
CNOT7-204	ENST00000518885	GLRX3	O76003	335 aa	Known RBP	29.13	■■■□□ 2.25
CNOT7-204	ENST00000518885	MBD4	O95243	580 aa		29.13	■■■□□ 2.25
CNOT7-204	ENST00000518885	ZFY	P08048	801 aa	Predicted RBP	29.13	■■■□□ 2.25
CNOT7-204	ENST00000518885	LACTB	P83111	547 aa	Predicted RBP	29.13	■■■□□ 2.25
CNOT7-204	ENST00000518885	SLC4A8	Q2Y0W8	1093 aa		29.13	■■■□□ 2.25
CNOT7-204	ENST00000518885	TATDN1	Q6P1N9	297 aa		29.13	■■■□□ 2.25
CNOT7-204	ENST00000518885	C17orf99	Q6UX52	265 aa		29.13	■■■□□ 2.25
CNOT7-204	ENST00000518885	KBTBD3	Q8NAB2	608 aa		29.13	■■■□□ 2.25
CNOT7-204	ENST00000518885	SIPA1L1	O43166	1804 aa		29.13	■■■□□ 2.25
CNOT7-204	ENST00000518885	ATAD5	Q96QE3	1844 aa		29.13	■■■□□ 2.25
CNOT7-204	ENST00000518885	SMCR8	Q8TEV9	937 aa	Predicted RBP	29.12	■■■□□ 2.25
CNOT7-204	ENST00000518885	ARMT1	Q9H993	441 aa		29.12	■■■□□ 2.25
CNOT7-204	ENST00000518885	TMOD4	Q9NZQ9	345 aa		29.12	■■■□□ 2.25
CNOT7-204	ENST00000518885	ZBTB21	Q9ULJ3	1066 aa		29.12	■■■□□ 2.25
CNOT7-204	ENST00000518885	PTPN22	Q9Y2R2	807 aa		29.12	■■■□□ 2.25
CNOT7-204	ENST00000518885	PHIP	Q8WWQ0	1821 aa		29.11	■■■□□ 2.25
CNOT7-204	ENST00000518885	C19orf81	C9J6K1	198 aa		29.11	■■■□□ 2.25
CNOT7-204	ENST00000518885	ANKRD45	Q5TZF3	282 aa		29.11	■■■□□ 2.25
CNOT7-204	ENST00000518885	RWDD1	Q9H446	243 aa	Predicted RBP	29.11	■■■□□ 2.25

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms