RNA–Protein interactions for RNA: ENST00000518794.6

ARFGAP1-209, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 1 (best)

Gene ARFGAP1, Length 2,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-209ENST00000518794 DIS3L2Q8IYB7 885 aaKnown RBP20.81■□□□□ 0.92
ARFGAP1-209ENST00000518794 SPATA5Q8NB90 893 aa20.81■□□□□ 0.92
ARFGAP1-209ENST00000518794 OXER1Q8TDS5 423 aa20.81■□□□□ 0.92
ARFGAP1-209ENST00000518794 NUP133Q8WUM0 1156 aa20.81■□□□□ 0.92
ARFGAP1-209ENST00000518794 PSDA5PKW4 1024 aaPredicted RBP20.81■□□□□ 0.92
ARFGAP1-209ENST00000518794 LCORLQ8N3X6 602 aa20.81■□□□□ 0.92
ARFGAP1-209ENST00000518794 TMEM87BQ96K49 555 aa20.81■□□□□ 0.92
ARFGAP1-209ENST00000518794 PCDHB6Q9Y5E3 794 aa20.81■□□□□ 0.92
ARFGAP1-209ENST00000518794 POLR2DO15514 142 aaKnown RBP20.8■□□□□ 0.92
ARFGAP1-209ENST00000518794 TOP1P11387 765 aaKnown RBP20.8■□□□□ 0.92
ARFGAP1-209ENST00000518794 NOSTRINQ8IVI9 506 aa20.8■□□□□ 0.92
ARFGAP1-209ENST00000518794 EPC1Q9H2F5 836 aa20.8■□□□□ 0.92
ARFGAP1-209ENST00000518794 L2HGDHQ9H9P8 463 aa20.8■□□□□ 0.92
ARFGAP1-209ENST00000518794 SERTAD1Q9UHV2 236 aa20.8■□□□□ 0.92
ARFGAP1-209ENST00000518794 FAM205CA6NFA0 338 aa20.79■□□□□ 0.92
ARFGAP1-209ENST00000518794 GSG1L2A8MUP6 293 aa20.79■□□□□ 0.92
ARFGAP1-209ENST00000518794 PATL2C9JE40 543 aaKnown RBP20.79■□□□□ 0.92
ARFGAP1-209ENST00000518794 CUTAO60888 179 aa20.79■□□□□ 0.92
ARFGAP1-209ENST00000518794 ARID4AP29374 1257 aaPredicted RBP20.79■□□□□ 0.92
ARFGAP1-209ENST00000518794 BCAMP50895 628 aa20.79■□□□□ 0.92
ARFGAP1-209ENST00000518794 VSTM4Q8IW00 320 aa20.79■□□□□ 0.92
ARFGAP1-209ENST00000518794 KRI1Q8N9T8 703 aaKnown RBP20.79■□□□□ 0.92
ARFGAP1-209ENST00000518794 FEZ2Q9UHY8 353 aaPredicted RBP20.79■□□□□ 0.92
ARFGAP1-209ENST00000518794 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.79■□□□□ 0.924e-8■□□□□ 9.8
ARFGAP1-209ENST00000518794 CDHR2Q9BYE9 1310 aa20.79■□□□□ 0.92
ARFGAP1-209ENST00000518794 TOGARAM1Q9Y4F4 1720 aa20.79■□□□□ 0.92
ARFGAP1-209ENST00000518794 ABCC12Q96J65 1359 aa20.79■□□□□ 0.92
ARFGAP1-209ENST00000518794 TDO2P48775 406 aa20.79■□□□□ 0.92
ARFGAP1-209ENST00000518794 ADKP55263 362 aaKnown RBP20.79■□□□□ 0.92
ARFGAP1-209ENST00000518794 CCDC93Q567U6 631 aa20.79■□□□□ 0.92
ARFGAP1-209ENST00000518794 MAN1B1Q9UKM7 699 aa20.79■□□□□ 0.92
ARFGAP1-209ENST00000518794 DDX60Q8IY21 1712 aaKnown RBP20.79■□□□□ 0.92
ARFGAP1-209ENST00000518794 PLEKHG2Q9H7P9 1386 aa20.79■□□□□ 0.92
ARFGAP1-209ENST00000518794 PAPPAQ13219 1627 aa20.79■□□□□ 0.92
ARFGAP1-209ENST00000518794 URI1O94763 535 aaPredicted RBP20.78■□□□□ 0.92
ARFGAP1-209ENST00000518794 CYP19A1P11511 503 aaPredicted RBP20.78■□□□□ 0.92
ARFGAP1-209ENST00000518794 ETF1P62495 437 aaKnown RBP20.78■□□□□ 0.92
ARFGAP1-209ENST00000518794 PUM3Q15397 648 aaKnown RBP20.78■□□□□ 0.92
ARFGAP1-209ENST00000518794 TRIM65Q6PJ69 517 aa20.78■□□□□ 0.92
ARFGAP1-209ENST00000518794 SGMS1Q86VZ5 419 aa20.78■□□□□ 0.92
ARFGAP1-209ENST00000518794 KIF2AO00139 706 aaPredicted RBP20.78■□□□□ 0.92
ARFGAP1-209ENST00000518794 NRDCO43847 1150 aa20.78■□□□□ 0.92
ARFGAP1-209ENST00000518794 PDE8AO60658 829 aa20.78■□□□□ 0.92
ARFGAP1-209ENST00000518794 CASP1P29466 404 aa20.78■□□□□ 0.92
ARFGAP1-209ENST00000518794 ARHGAP29Q52LW3 1261 aa20.78■□□□□ 0.92
ARFGAP1-209ENST00000518794 MFSD6Q6ZSS7 791 aa20.78■□□□□ 0.92
ARFGAP1-209ENST00000518794 DHX37Q8IY37 1157 aaKnown RBP20.78■□□□□ 0.92
ARFGAP1-209ENST00000518794 SLC4A4Q9Y6R1 1079 aa20.78■□□□□ 0.92
ARFGAP1-209ENST00000518794 DCCP43146 1447 aa20.78■□□□□ 0.92
ARFGAP1-209ENST00000518794 FMNL1O95466 1100 aaPredicted RBP20.77■□□□□ 0.92
ARFGAP1-209ENST00000518794 HNRNPH2P55795 449 aaKnown RBP20.77■□□□□ 0.92
ARFGAP1-209ENST00000518794 MDM2Q00987 491 aaPredicted RBP20.77■□□□□ 0.92
ARFGAP1-209ENST00000518794 AKNAD1Q5T1N1 836 aa20.77■□□□□ 0.92
ARFGAP1-209ENST00000518794 LPIN2Q92539 896 aa20.77■□□□□ 0.92
ARFGAP1-209ENST00000518794 ATRNO75882 1429 aa20.77■□□□□ 0.92
ARFGAP1-209ENST00000518794 WTIPA6NIX2 430 aaPredicted RBP20.77■□□□□ 0.92
ARFGAP1-209ENST00000518794 MMP1P03956 469 aa20.77■□□□□ 0.92
ARFGAP1-209ENST00000518794 RTN1Q16799 776 aa20.77■□□□□ 0.92
ARFGAP1-209ENST00000518794 DZIP3Q86Y13 1208 aaKnown RBP20.77■□□□□ 0.92
ARFGAP1-209ENST00000518794 REXO1L1PQ8IX06 675 aa20.77■□□□□ 0.92
ARFGAP1-209ENST00000518794 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.77■□□□□ 0.92
ARFGAP1-209ENST00000518794 NFE2L3Q9Y4A8 694 aa20.77■□□□□ 0.92
ARFGAP1-209ENST00000518794 ZNF512BQ96KM6 892 aaPredicted RBP20.77■□□□□ 0.91
ARFGAP1-209ENST00000518794 MED15Q96RN5 788 aa20.77■□□□□ 0.91
ARFGAP1-209ENST00000518794 SHANK3Q9BYB0 1731 aa20.76■□□□□ 0.91
ARFGAP1-209ENST00000518794 CHRM1P11229 460 aaPredicted RBP20.76■□□□□ 0.91
ARFGAP1-209ENST00000518794 FGFR2P21802 821 aa20.76■□□□□ 0.91
ARFGAP1-209ENST00000518794 POSTNQ15063 836 aa20.76■□□□□ 0.91
ARFGAP1-209ENST00000518794 SDR42E1Q8WUS8 393 aa20.76■□□□□ 0.91
ARFGAP1-209ENST00000518794 SAMSN1Q9NSI8 373 aaKnown RBP20.76■□□□□ 0.91
ARFGAP1-209ENST00000518794 FBXO2Q9UK22 296 aaPredicted RBP20.76■□□□□ 0.91
ARFGAP1-209ENST00000518794 UQCRFS1P1P0C7P4 283 aa20.76■□□□□ 0.91
ARFGAP1-209ENST00000518794 CLCN6P51797 869 aa20.76■□□□□ 0.91
ARFGAP1-209ENST00000518794 MAP3K12Q12852 859 aa20.76■□□□□ 0.91
ARFGAP1-209ENST00000518794 TMEM139Q8IV31 216 aa20.76■□□□□ 0.91
ARFGAP1-209ENST00000518794 DESI2Q9BSY9 194 aa20.76■□□□□ 0.91
ARFGAP1-209ENST00000518794 TEX13AQ9BXU3 409 aaPredicted RBP20.76■□□□□ 0.91
ARFGAP1-209ENST00000518794 CABP5Q9NP86 173 aa20.76■□□□□ 0.91
ARFGAP1-209ENST00000518794 FAM237AA0A1B0GTK4 181 aa20.75■□□□□ 0.91
ARFGAP1-209ENST00000518794 MINDY4BA8MYZ0 360 aa20.75■□□□□ 0.91
ARFGAP1-209ENST00000518794 CBFA2T2O43439 604 aa20.75■□□□□ 0.91
ARFGAP1-209ENST00000518794 COBLO75128 1261 aa20.75■□□□□ 0.91
ARFGAP1-209ENST00000518794 LIFRP42702 1097 aa20.75■□□□□ 0.91
ARFGAP1-209ENST00000518794 WTAPQ15007 396 aa20.75■□□□□ 0.91
ARFGAP1-209ENST00000518794 TOGARAM2Q6ZUX3 1019 aa20.75■□□□□ 0.91
ARFGAP1-209ENST00000518794 SHISA4Q96DD7 197 aa20.75■□□□□ 0.91
ARFGAP1-209ENST00000518794 CARD6Q9BX69 1037 aa20.75■□□□□ 0.91
ARFGAP1-209ENST00000518794 ECM29Q5VYK3 1845 aa20.75■□□□□ 0.91
ARFGAP1-209ENST00000518794 PRDM1O75626 825 aa20.75■□□□□ 0.91
ARFGAP1-209ENST00000518794 IFNAR1P17181 557 aa20.75■□□□□ 0.91
ARFGAP1-209ENST00000518794 SAFBQ15424 915 aaKnown RBP eCLIP20.74■□□□□ 0.91
ARFGAP1-209ENST00000518794 WDR24Q96S15 920 aa20.74■□□□□ 0.91
ARFGAP1-209ENST00000518794 BTG4Q9NY30 223 aa20.74■□□□□ 0.91
ARFGAP1-209ENST00000518794 VWA3AA6NCI4 1184 aa20.74■□□□□ 0.91
ARFGAP1-209ENST00000518794 EARS2Q5JPH6 523 aaKnown RBP20.74■□□□□ 0.91
ARFGAP1-209ENST00000518794 SUSD4Q5VX71 490 aa20.74■□□□□ 0.91
ARFGAP1-209ENST00000518794 KLHL10Q6JEL2 608 aa20.74■□□□□ 0.91
ARFGAP1-209ENST00000518794 ADGRA1Q86SQ6 560 aa20.74■□□□□ 0.91
ARFGAP1-209ENST00000518794 MPHOSPH8Q99549 860 aa20.74■□□□□ 0.91
ARFGAP1-209ENST00000518794 CSRNP2Q9H175 543 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms