RNA–Protein interactions for RNA: ENST00000518560.1

TTC1-202, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 5

Gene TTC1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-202ENST00000518560 MYH2Q9UKX2 1941 aa12.03□□□□□ -0.48
TTC1-202ENST00000518560 ST8SIA5O15466 376 aa12.02□□□□□ -0.49
TTC1-202ENST00000518560 ADH1BP00325 375 aa12.02□□□□□ -0.49
TTC1-202ENST00000518560 IFIT1P09914 478 aaKnown RBP12.02□□□□□ -0.49
TTC1-202ENST00000518560 SLC5A1P13866 664 aa12.02□□□□□ -0.49
TTC1-202ENST00000518560 HNRNPUQ00839 825 aaKnown RBP eCLIP12.02□□□□□ -0.49
TTC1-202ENST00000518560 ATP2B3Q16720 1220 aa12.02□□□□□ -0.49
TTC1-202ENST00000518560 TMEM39BQ9GZU3 492 aa12.02□□□□□ -0.49
TTC1-202ENST00000518560 R3HDMLQ9H3Y0 253 aa12.02□□□□□ -0.49
TTC1-202ENST00000518560 AAASQ9NRG9 546 aa12.02□□□□□ -0.49
TTC1-202ENST00000518560 SERPINA10Q9UK55 444 aa12.02□□□□□ -0.49
TTC1-202ENST00000518560 PPP2R3BQ9Y5P8 575 aa12.02□□□□□ -0.49
TTC1-202ENST00000518560 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.02□□□□□ -0.49
TTC1-202ENST00000518560 NR1I2O75469 434 aa12.01□□□□□ -0.49
TTC1-202ENST00000518560 TRIM27P14373 513 aa12.01□□□□□ -0.49
TTC1-202ENST00000518560 ADORA1P30542 326 aa12.01□□□□□ -0.49
TTC1-202ENST00000518560 GJA5P36382 358 aa12.01□□□□□ -0.49
TTC1-202ENST00000518560 PHKA1P46020 1223 aa12.01□□□□□ -0.49
TTC1-202ENST00000518560 MAP3K11Q16584 847 aa12.01□□□□□ -0.49
TTC1-202ENST00000518560 DIEXFQ68CQ4 756 aaKnown RBP12.01□□□□□ -0.49
TTC1-202ENST00000518560 INTS3Q68E01 1043 aaKnown RBP12.01□□□□□ -0.49
TTC1-202ENST00000518560 TEPSINQ96N21 525 aa12.01□□□□□ -0.49
TTC1-202ENST00000518560 DOCK2Q92608 1830 aa12□□□□□ -0.49
TTC1-202ENST00000518560 USP2O75604 605 aaPredicted RBP12□□□□□ -0.49
TTC1-202ENST00000518560 LPIN2Q92539 896 aa12□□□□□ -0.49
TTC1-202ENST00000518560 WNK4Q96J92 1243 aa12□□□□□ -0.49
TTC1-202ENST00000518560 SLC6A16Q9GZN6 736 aa12□□□□□ -0.49
TTC1-202ENST00000518560 ZSWIM8A7E2V4 1837 aa12□□□□□ -0.49
TTC1-202ENST00000518560 PPP1R12BO60237 982 aaPredicted RBP11.99□□□□□ -0.49
TTC1-202ENST00000518560 CIAO1O76071 339 aa11.99□□□□□ -0.49
TTC1-202ENST00000518560 CFHP08603 1231 aa11.99□□□□□ -0.49
TTC1-202ENST00000518560 PRDX5P30044 214 aa11.99□□□□□ -0.49
TTC1-202ENST00000518560 TM4SF4P48230 202 aa11.99□□□□□ -0.49
TTC1-202ENST00000518560 TNFAIP1Q13829 316 aa11.99□□□□□ -0.49
TTC1-202ENST00000518560 DIXDC1Q155Q3 683 aa11.99□□□□□ -0.49
TTC1-202ENST00000518560 TBC1D22AQ8WUA7 517 aa11.99□□□□□ -0.49
TTC1-202ENST00000518560 ZNF296Q8WUU4 475 aaPredicted RBP11.99□□□□□ -0.49
TTC1-202ENST00000518560 TEKT1Q969V4 418 aa11.99□□□□□ -0.49
TTC1-202ENST00000518560 SLC10A4Q96EP9 437 aa11.99□□□□□ -0.49
TTC1-202ENST00000518560 ELP3Q9H9T3 547 aa11.99□□□□□ -0.49
TTC1-202ENST00000518560 CEP126Q9P2H0 1117 aa11.99□□□□□ -0.49
TTC1-202ENST00000518560 MYO5AQ9Y4I1 1855 aaKnown RBP11.99□□□□□ -0.49
TTC1-202ENST00000518560 PNMA6EA0A0J9YXQ4 647 aa11.98□□□□□ -0.49
TTC1-202ENST00000518560 IGF2BP3O00425 579 aaKnown RBP eCLIP11.98□□□□□ -0.49
TTC1-202ENST00000518560 SRGAP3O43295 1099 aa11.98□□□□□ -0.49
TTC1-202ENST00000518560 TFCP2Q12800 502 aa11.98□□□□□ -0.49
TTC1-202ENST00000518560 SUPT20HL1Q3ZLR7 823 aa11.98□□□□□ -0.49
TTC1-202ENST00000518560 APOBEC3HQ6NTF7 200 aaKnown RBP11.98□□□□□ -0.49
TTC1-202ENST00000518560 ATF7IPQ6VMQ6 1270 aa11.98□□□□□ -0.49
TTC1-202ENST00000518560 TMEM57Q8N5G2 664 aa11.98□□□□□ -0.49
TTC1-202ENST00000518560 ARHGAP45Q92619 1136 aa11.98□□□□□ -0.49
TTC1-202ENST00000518560 TMEM134Q9H6X4 195 aa11.98□□□□□ -0.49
TTC1-202ENST00000518560 COPRSQ9NQ92 184 aa11.98□□□□□ -0.49
TTC1-202ENST00000518560 IL15P40933 162 aaPredicted RBP11.97□□□□□ -0.49
TTC1-202ENST00000518560 IREB2P48200 963 aaKnown RBP11.97□□□□□ -0.49
TTC1-202ENST00000518560 TIMM10P62072 90 aa11.97□□□□□ -0.49
TTC1-202ENST00000518560 SREBF2Q12772 1141 aa11.97□□□□□ -0.49
TTC1-202ENST00000518560 FOXC1Q12948 553 aa11.97□□□□□ -0.49
TTC1-202ENST00000518560 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.97□□□□□ -0.49
TTC1-202ENST00000518560 ZDHHC15Q96MV8 337 aa11.97□□□□□ -0.49
TTC1-202ENST00000518560 DAGLAQ9Y4D2 1042 aa11.97□□□□□ -0.49
TTC1-202ENST00000518560 MAST3O60307 1309 aa11.96□□□□□ -0.49
TTC1-202ENST00000518560 GPR25O00155 361 aa11.96□□□□□ -0.49
TTC1-202ENST00000518560 GNAI3P08754 354 aa11.96□□□□□ -0.49
TTC1-202ENST00000518560 TNNI2P48788 182 aa11.96□□□□□ -0.49
TTC1-202ENST00000518560 SOX10P56693 466 aa11.96□□□□□ -0.49
TTC1-202ENST00000518560 HDLBPQ00341 1268 aaKnown RBP11.96□□□□□ -0.49
TTC1-202ENST00000518560 RASGRF1Q13972 1273 aa11.96□□□□□ -0.49
TTC1-202ENST00000518560 VGLL4Q14135 290 aa11.96□□□□□ -0.49
TTC1-202ENST00000518560 CCDC102BQ68D86 513 aa11.96□□□□□ -0.49
TTC1-202ENST00000518560 CTU1Q7Z7A3 348 aaKnown RBP11.96□□□□□ -0.49
TTC1-202ENST00000518560 ANKRD13AQ8IZ07 590 aa11.96□□□□□ -0.49
TTC1-202ENST00000518560 WDR66Q8TBY9 1149 aa11.96□□□□□ -0.49
TTC1-202ENST00000518560 OPTNQ96CV9 577 aa11.96□□□□□ -0.49
TTC1-202ENST00000518560 C1orf115Q9H7X2 142 aa11.96□□□□□ -0.49
TTC1-202ENST00000518560 A0A1B0GUL7 405 aa11.95□□□□□ -0.5
TTC1-202ENST00000518560 MANSC4A6NHS7 340 aaPredicted RBP11.95□□□□□ -0.5
TTC1-202ENST00000518560 ZBTB48P10074 688 aaPredicted RBP11.95□□□□□ -0.5
TTC1-202ENST00000518560 RLBP1P12271 317 aa11.95□□□□□ -0.5
TTC1-202ENST00000518560 TCP10Q12799 353 aa11.95□□□□□ -0.5
TTC1-202ENST00000518560 NFIAQ12857 509 aa11.95□□□□□ -0.5
TTC1-202ENST00000518560 MTX1Q13505 466 aa11.95□□□□□ -0.5
TTC1-202ENST00000518560 CDC42EP5Q6NZY7 148 aa11.95□□□□□ -0.5
TTC1-202ENST00000518560 HHIPL2Q6UWX4 724 aa11.95□□□□□ -0.5
TTC1-202ENST00000518560 PI16Q6UXB8 463 aa11.95□□□□□ -0.5
TTC1-202ENST00000518560 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.95□□□□□ -0.51e-6■■■□□ 17
TTC1-202ENST00000518560 TMOD2Q9NZR1 351 aa11.95□□□□□ -0.5
TTC1-202ENST00000518560 CDK5RAP2Q96SN8 1893 aa11.95□□□□□ -0.5
TTC1-202ENST00000518560 MAST2Q6P0Q8 1798 aa11.95□□□□□ -0.5
TTC1-202ENST00000518560 IPO8O15397 1037 aaKnown RBP11.94□□□□□ -0.5
TTC1-202ENST00000518560 LDHBP07195 334 aaKnown RBP11.94□□□□□ -0.5
TTC1-202ENST00000518560 LCE2AQ5TA79 106 aaPredicted RBP11.94□□□□□ -0.5
TTC1-202ENST00000518560 ZKSCAN2Q63HK3 967 aa11.94□□□□□ -0.5
TTC1-202ENST00000518560 MIGA2Q7L4E1 593 aa11.94□□□□□ -0.5
TTC1-202ENST00000518560 ZKSCAN4Q969J2 545 aaPredicted RBP11.94□□□□□ -0.5
TTC1-202ENST00000518560 XAGE2Q96GT9 111 aa11.94□□□□□ -0.5
TTC1-202ENST00000518560 PTPN18Q99952 460 aa11.94□□□□□ -0.5
TTC1-202ENST00000518560 HDAC5Q9UQL6 1122 aa11.94□□□□□ -0.5
TTC1-202ENST00000518560 SUGT1Q9Y2Z0 365 aa11.94□□□□□ -0.5
TTC1-202ENST00000518560 SNCAIPQ9Y6H5 919 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms