RNA–Protein interactions for RNA: ENST00000518236.1

FAM3B-206, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 2

Gene FAM3B, Length 1,052 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-206ENST00000518236 AFG3L2Q9Y4W6 797 aa13.17□□□□□ -0.3
FAM3B-206ENST00000518236 TRIM17Q9Y577 477 aa13.17□□□□□ -0.3
FAM3B-206ENST00000518236 COL2A1P02458 1487 aaPredicted RBP13.16□□□□□ -0.3
FAM3B-206ENST00000518236 CXCL11O14625 94 aa13.16□□□□□ -0.3
FAM3B-206ENST00000518236 TLR2O60603 784 aa13.16□□□□□ -0.3
FAM3B-206ENST00000518236 RAB11FIP3O75154 756 aa13.16□□□□□ -0.3
FAM3B-206ENST00000518236 BAG3O95817 575 aa13.16□□□□□ -0.3
FAM3B-206ENST00000518236 CYP7A1P22680 504 aa13.16□□□□□ -0.3
FAM3B-206ENST00000518236 DYNLL1P63167 89 aaKnown RBP13.16□□□□□ -0.3
FAM3B-206ENST00000518236 ANKRD23Q86SG2 305 aa13.16□□□□□ -0.3
FAM3B-206ENST00000518236 CCDC84Q86UT8 332 aaPredicted RBP13.16□□□□□ -0.3
FAM3B-206ENST00000518236 TGFBRAP1Q8WUH2 860 aa13.16□□□□□ -0.3
FAM3B-206ENST00000518236 ERO1AQ96HE7 468 aa13.16□□□□□ -0.3
FAM3B-206ENST00000518236 CHMP4BQ9H444 224 aaKnown RBP13.16□□□□□ -0.3
FAM3B-206ENST00000518236 ZHX2Q9Y6X8 837 aa13.16□□□□□ -0.3
FAM3B-206ENST00000518236 PDHXO00330 501 aa13.15□□□□□ -0.3
FAM3B-206ENST00000518236 IDH1O75874 414 aaKnown RBP13.15□□□□□ -0.3
FAM3B-206ENST00000518236 SOX10P56693 466 aa13.15□□□□□ -0.3
FAM3B-206ENST00000518236 MAPKAPK5Q8IW41 473 aa13.15□□□□□ -0.3
FAM3B-206ENST00000518236 CLASRPQ8N2M8 674 aaKnown RBP13.15□□□□□ -0.3
FAM3B-206ENST00000518236 DNAJC18Q9H819 358 aa13.15□□□□□ -0.3
FAM3B-206ENST00000518236 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.15□□□□□ -0.3
FAM3B-206ENST00000518236 FLT1P17948 1338 aa13.14□□□□□ -0.31
FAM3B-206ENST00000518236 ADGRA2Q96PE1 1338 aa13.14□□□□□ -0.31
FAM3B-206ENST00000518236 A0A0G2JLL6 359 aaPredicted RBP13.14□□□□□ -0.31
FAM3B-206ENST00000518236 PLCG2P16885 1265 aa13.14□□□□□ -0.31
FAM3B-206ENST00000518236 JAG1P78504 1218 aa13.14□□□□□ -0.31
FAM3B-206ENST00000518236 C17orf99Q6UX52 265 aa13.14□□□□□ -0.31
FAM3B-206ENST00000518236 PRRT2Q7Z6L0 340 aaPredicted RBP13.14□□□□□ -0.31
FAM3B-206ENST00000518236 METTL16Q86W50 562 aaKnown RBP13.14□□□□□ -0.31
FAM3B-206ENST00000518236 MAGEB6Q8N7X4 407 aa13.14□□□□□ -0.31
FAM3B-206ENST00000518236 MIGA1Q8NAN2 632 aa13.14□□□□□ -0.31
FAM3B-206ENST00000518236 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.14□□□□□ -0.31
FAM3B-206ENST00000518236 NOL10Q9BSC4 688 aaKnown RBP13.14□□□□□ -0.31
FAM3B-206ENST00000518236 PICK1Q9NRD5 415 aa13.14□□□□□ -0.31
FAM3B-206ENST00000518236 PTPN22Q9Y2R2 807 aa13.14□□□□□ -0.31
FAM3B-206ENST00000518236 IFIT2P09913 472 aaKnown RBP13.13□□□□□ -0.31
FAM3B-206ENST00000518236 CTGFP29279 349 aa13.13□□□□□ -0.31
FAM3B-206ENST00000518236 CAP2P40123 477 aa13.13□□□□□ -0.31
FAM3B-206ENST00000518236 MLLT1Q03111 559 aaPredicted RBP13.13□□□□□ -0.31
FAM3B-206ENST00000518236 EDC3Q96F86 508 aaKnown RBP13.13□□□□□ -0.31
FAM3B-206ENST00000518236 ARHGAP39Q9C0H5 1083 aa13.13□□□□□ -0.31
FAM3B-206ENST00000518236 DHX36Q9H2U1 1008 aaKnown RBP13.13□□□□□ -0.31
FAM3B-206ENST00000518236 EFCC1Q9HA90 598 aa13.13□□□□□ -0.31
FAM3B-206ENST00000518236 PI4KBQ9UBF8 816 aa13.13□□□□□ -0.31
FAM3B-206ENST00000518236 PALD1Q9ULE6 856 aa13.13□□□□□ -0.31
FAM3B-206ENST00000518236 AK9Q5TCS8 1911 aa13.12□□□□□ -0.31
FAM3B-206ENST00000518236 DOCK2Q92608 1830 aa13.12□□□□□ -0.31
FAM3B-206ENST00000518236 LACTBP83111 547 aaPredicted RBP13.12□□□□□ -0.31
FAM3B-206ENST00000518236 MAP3K12Q12852 859 aa13.12□□□□□ -0.31
FAM3B-206ENST00000518236 FOXP4Q8IVH2 680 aaPredicted RBP13.12□□□□□ -0.31
FAM3B-206ENST00000518236 RIOK1Q9BRS2 568 aaKnown RBP13.12□□□□□ -0.31
FAM3B-206ENST00000518236 CPA4Q9UI42 421 aa13.12□□□□□ -0.31
FAM3B-206ENST00000518236 HERC5Q9UII4 1024 aaKnown RBP13.12□□□□□ -0.31
FAM3B-206ENST00000518236 MYO5AQ9Y4I1 1855 aaKnown RBP13.11□□□□□ -0.31
FAM3B-206ENST00000518236 TCRBV5S4A2TA0A5A2 114 aa13.11□□□□□ -0.31
FAM3B-206ENST00000518236 TRIM75PA6NK02 468 aa13.11□□□□□ -0.31
FAM3B-206ENST00000518236 GOLIM4O00461 696 aa13.11□□□□□ -0.31
FAM3B-206ENST00000518236 SMARCA5O60264 1052 aaPredicted RBP13.11□□□□□ -0.31
FAM3B-206ENST00000518236 CYP2C8P10632 490 aa13.11□□□□□ -0.31
FAM3B-206ENST00000518236 ATP5JP18859 108 aa13.11□□□□□ -0.31
FAM3B-206ENST00000518236 SHROOM1Q2M3G4 852 aaPredicted RBP13.11□□□□□ -0.31
FAM3B-206ENST00000518236 TMED8Q6PL24 325 aaPredicted RBP13.11□□□□□ -0.31
FAM3B-206ENST00000518236 FASTKD5Q7L8L6 764 aaKnown RBP13.11□□□□□ -0.31
FAM3B-206ENST00000518236 BCL11AQ9H165 835 aa13.11□□□□□ -0.31
FAM3B-206ENST00000518236 BOLA2Q9H3K6 86 aa13.11□□□□□ -0.31
FAM3B-206ENST00000518236 DCTPP1Q9H773 170 aa13.11□□□□□ -0.31
FAM3B-206ENST00000518236 SAP30BPQ9UHR5 308 aaKnown RBP13.11□□□□□ -0.31
FAM3B-206ENST00000518236 MAST2Q6P0Q8 1798 aa13.11□□□□□ -0.31
FAM3B-206ENST00000518236 BCRP11274 1271 aa13.1□□□□□ -0.31
FAM3B-206ENST00000518236 PDE6AP16499 860 aa13.1□□□□□ -0.31
FAM3B-206ENST00000518236 SPP2Q13103 211 aa13.1□□□□□ -0.31
FAM3B-206ENST00000518236 TTF1Q15361 905 aaPredicted RBP13.1□□□□□ -0.31
FAM3B-206ENST00000518236 SLFNL1Q499Z3 407 aa13.1□□□□□ -0.31
FAM3B-206ENST00000518236 SLC9C2Q5TAH2 1124 aa13.1□□□□□ -0.31
FAM3B-206ENST00000518236 DNAJC2Q99543 621 aaKnown RBP13.1□□□□□ -0.31
FAM3B-206ENST00000518236 LRRCC1Q9C099 1032 aa13.1□□□□□ -0.31
FAM3B-206ENST00000518236 PCDHB15Q9Y5E8 787 aa13.1□□□□□ -0.31
FAM3B-206ENST00000518236 ZSWIM8A7E2V4 1837 aa13.1□□□□□ -0.31
FAM3B-206ENST00000518236 PDE4DIPQ5VU43 2346 aa13.1□□□□□ -0.31
FAM3B-206ENST00000518236 SIPA1L1O43166 1804 aa13.09□□□□□ -0.31
FAM3B-206ENST00000518236 CHGBP05060 677 aa13.09□□□□□ -0.31
FAM3B-206ENST00000518236 PRKAR2AP13861 404 aaKnown RBP13.09□□□□□ -0.31
FAM3B-206ENST00000518236 SLC4A8Q2Y0W8 1093 aa13.09□□□□□ -0.31
FAM3B-206ENST00000518236 TREML2Q5T2D2 321 aa13.09□□□□□ -0.31
FAM3B-206ENST00000518236 GADL1Q6ZQY3 521 aa13.09□□□□□ -0.31
FAM3B-206ENST00000518236 CERS3Q8IU89 383 aa13.09□□□□□ -0.31
FAM3B-206ENST00000518236 ZNF280CQ8ND82 737 aa13.09□□□□□ -0.31
FAM3B-206ENST00000518236 ARMC5Q96C12 935 aa13.09□□□□□ -0.31
FAM3B-206ENST00000518236 PARK7Q99497 189 aaKnown RBP13.09□□□□□ -0.31
FAM3B-206ENST00000518236 HAUS7Q99871 368 aa13.09□□□□□ -0.31
FAM3B-206ENST00000518236 SLC45A1Q9Y2W3 748 aa13.09□□□□□ -0.31
FAM3B-206ENST00000518236 PTCH2Q9Y6C5 1203 aa13.09□□□□□ -0.31
FAM3B-206ENST00000518236 ZNF532Q9HCE3 1301 aa13.09□□□□□ -0.31
FAM3B-206ENST00000518236 USP17L5A8MUK1 530 aa13.08□□□□□ -0.32
FAM3B-206ENST00000518236 ECM2O94769 699 aaPredicted RBP13.08□□□□□ -0.32
FAM3B-206ENST00000518236 USP5P45974 858 aa13.08□□□□□ -0.32
FAM3B-206ENST00000518236 RRP1P56182 461 aaKnown RBP13.08□□□□□ -0.32
FAM3B-206ENST00000518236 SH3D19Q5HYK7 790 aa13.08□□□□□ -0.32
FAM3B-206ENST00000518236 TRIM47Q96LD4 638 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms