RNA–Protein interactions for RNA: ENST00000518209.1

CDH12-204, Transcript of cadherin 12, humanhuman

TSL 3

Gene CDH12, Length 666 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-204ENST00000518209 FBXL18Q96ME1 805 aa6.09□□□□□ -1.43
CDH12-204ENST00000518209 C8orf37Q96NL8 207 aa6.09□□□□□ -1.43
CDH12-204ENST00000518209 LGR6Q9HBX8 967 aa6.09□□□□□ -1.43
CDH12-204ENST00000518209 PCOLCE2Q9UKZ9 415 aa6.09□□□□□ -1.43
CDH12-204ENST00000518209 CYP8B1Q9UNU6 501 aa6.09□□□□□ -1.43
CDH12-204ENST00000518209 AK5Q9Y6K8 562 aa6.09□□□□□ -1.43
CDH12-204ENST00000518209 DYNC1LI2O43237 492 aaPredicted RBP6.08□□□□□ -1.44
CDH12-204ENST00000518209 PAGE1O75459 146 aa6.08□□□□□ -1.44
CDH12-204ENST00000518209 HCLS1P14317 486 aaPredicted RBP6.08□□□□□ -1.44
CDH12-204ENST00000518209 ZC3H6P61129 1189 aaKnown RBP6.08□□□□□ -1.44
CDH12-204ENST00000518209 ERVK-24P63145 666 aa6.08□□□□□ -1.44
CDH12-204ENST00000518209 XPCQ01831 940 aaPredicted RBP6.08□□□□□ -1.44
CDH12-204ENST00000518209 CYP27C1Q4G0S4 372 aa6.08□□□□□ -1.44
CDH12-204ENST00000518209 LLGL2Q6P1M3 1020 aa6.08□□□□□ -1.44
CDH12-204ENST00000518209 SV2BQ7L1I2 683 aa6.08□□□□□ -1.44
CDH12-204ENST00000518209 RNF214Q8ND24 703 aa6.08□□□□□ -1.44
CDH12-204ENST00000518209 GRIN3AQ8TCU5 1115 aa6.08□□□□□ -1.44
CDH12-204ENST00000518209 FAM161BQ96MY7 647 aa6.08□□□□□ -1.44
CDH12-204ENST00000518209 SSU72Q9NP77 194 aaKnown RBP6.08□□□□□ -1.44
CDH12-204ENST00000518209 CACNA2D2Q9NY47 1150 aa6.08□□□□□ -1.44
CDH12-204ENST00000518209 PARP2Q9UGN5 583 aa6.08□□□□□ -1.44
CDH12-204ENST00000518209 TTF2Q9UNY4 1162 aaKnown RBP6.08□□□□□ -1.44
CDH12-204ENST00000518209 ZNF865P0CJ78 1059 aaPredicted RBP6.07□□□□□ -1.44
CDH12-204ENST00000518209 PCNX4Q63HM2 1172 aa6.07□□□□□ -1.44
CDH12-204ENST00000518209 ZNF765Q7L2R6 523 aa6.07□□□□□ -1.44
CDH12-204ENST00000518209 DRC1Q96MC2 740 aa6.07□□□□□ -1.44
CDH12-204ENST00000518209 DUSP9Q99956 384 aaKnown RBP6.07□□□□□ -1.44
CDH12-204ENST00000518209 RNF19AQ9NV58 838 aa6.07□□□□□ -1.44
CDH12-204ENST00000518209 SCAMP3O14828 347 aaKnown RBP6.06□□□□□ -1.44
CDH12-204ENST00000518209 CELA3AP09093 270 aa6.06□□□□□ -1.44
CDH12-204ENST00000518209 ERCC5P28715 1186 aaPredicted RBP6.06□□□□□ -1.44
CDH12-204ENST00000518209 MSMPQ1L6U9 139 aa6.06□□□□□ -1.44
CDH12-204ENST00000518209 NAALADL2Q58DX5 795 aa6.06□□□□□ -1.44
CDH12-204ENST00000518209 C9orf131Q5VYM1 1079 aa6.06□□□□□ -1.44
CDH12-204ENST00000518209 LILRA6Q6PI73 481 aa6.06□□□□□ -1.44
CDH12-204ENST00000518209 MPRIPQ6WCQ1 1025 aa6.06□□□□□ -1.44
CDH12-204ENST00000518209 SREK1Q8WXA9 508 aaKnown RBP6.06□□□□□ -1.44
CDH12-204ENST00000518209 KRTAP9-3Q9BYQ3 159 aa6.06□□□□□ -1.44
CDH12-204ENST00000518209 LRRC4CQ9HCJ2 640 aa6.06□□□□□ -1.44
CDH12-204ENST00000518209 MRS2Q9HD23 443 aa6.06□□□□□ -1.44
CDH12-204ENST00000518209 B8ZZF3 427 aa6.05□□□□□ -1.44
CDH12-204ENST00000518209 HDLBPQ00341 1268 aaKnown RBP6.05□□□□□ -1.44
CDH12-204ENST00000518209 CDK5R2Q13319 367 aa6.05□□□□□ -1.44
CDH12-204ENST00000518209 LDLRAD1Q5T700 205 aa6.05□□□□□ -1.44
CDH12-204ENST00000518209 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.05□□□□□ -1.44
CDH12-204ENST00000518209 TMEM87AQ8NBN3 555 aa6.05□□□□□ -1.44
CDH12-204ENST00000518209 ISL2Q96A47 359 aa6.05□□□□□ -1.44
CDH12-204ENST00000518209 PICK1Q9NRD5 415 aa6.05□□□□□ -1.44
CDH12-204ENST00000518209 BSDC1Q9NW68 430 aaPredicted RBP6.05□□□□□ -1.44
CDH12-204ENST00000518209 PCDHA4Q9UN74 947 aa6.05□□□□□ -1.44
CDH12-204ENST00000518209 DCDC2CA8MYV0 355 aa6.04□□□□□ -1.44
CDH12-204ENST00000518209 FARP2O94887 1054 aaPredicted RBP6.04□□□□□ -1.44
CDH12-204ENST00000518209 PRNPP04156 253 aa6.04□□□□□ -1.44
CDH12-204ENST00000518209 NEFMP07197 916 aa6.04□□□□□ -1.44
CDH12-204ENST00000518209 FAM87AP0C7U9 286 aa6.04□□□□□ -1.44
CDH12-204ENST00000518209 CCDC85BQ15834 202 aaPredicted RBP6.04□□□□□ -1.44
CDH12-204ENST00000518209 PPM1JQ5JR12 505 aa6.04□□□□□ -1.44
CDH12-204ENST00000518209 RASIP1Q5U651 963 aa6.04□□□□□ -1.44
CDH12-204ENST00000518209 C12orf40Q86WS4 652 aa6.04□□□□□ -1.44
CDH12-204ENST00000518209 TP53INP2Q8IXH6 220 aa6.04□□□□□ -1.44
CDH12-204ENST00000518209 ELMO3Q96BJ8 720 aa6.04□□□□□ -1.44
CDH12-204ENST00000518209 PPP1R1BQ9UD71 204 aaPredicted RBP6.04□□□□□ -1.44
CDH12-204ENST00000518209 CCDC39Q9UFE4 941 aa6.04□□□□□ -1.44
CDH12-204ENST00000518209 CSADQ9Y600 493 aa6.04□□□□□ -1.44
CDH12-204ENST00000518209 FANCGO15287 622 aa6.03□□□□□ -1.44
CDH12-204ENST00000518209 SORBS3O60504 671 aa6.03□□□□□ -1.44
CDH12-204ENST00000518209 DAB2P98082 770 aa6.03□□□□□ -1.44
CDH12-204ENST00000518209 RING1Q06587 406 aa6.03□□□□□ -1.44
CDH12-204ENST00000518209 PSMD2Q13200 908 aa6.03□□□□□ -1.44
CDH12-204ENST00000518209 TTBK2Q6IQ55 1244 aa6.03□□□□□ -1.44
CDH12-204ENST00000518209 CDC37L1Q7L3B6 337 aa6.03□□□□□ -1.44
CDH12-204ENST00000518209 TMC4Q7Z404 712 aa6.03□□□□□ -1.44
CDH12-204ENST00000518209 VTI1BQ9UEU0 232 aa6.03□□□□□ -1.44
CDH12-204ENST00000518209 ZC3H7BQ9UGR2 993 aaKnown RBP6.03□□□□□ -1.44
CDH12-204ENST00000518209 LMNB1P20700 586 aa6.02□□□□□ -1.45
CDH12-204ENST00000518209 RPS26P62854 115 aaKnown RBP6.02□□□□□ -1.45
CDH12-204ENST00000518209 HDXQ7Z353 690 aa6.02□□□□□ -1.45
CDH12-204ENST00000518209 VSIG10LQ86VR7 867 aa6.02□□□□□ -1.45
CDH12-204ENST00000518209 KCT2Q8NC54 265 aa6.02□□□□□ -1.45
CDH12-204ENST00000518209 DUSP23Q9BVJ7 150 aa6.02□□□□□ -1.45
CDH12-204ENST00000518209 RLBP1P12271 317 aa6.01□□□□□ -1.45
CDH12-204ENST00000518209 ITGAEP38570 1179 aa6.01□□□□□ -1.45
CDH12-204ENST00000518209 ZBTB37Q5TC79 503 aa6.01□□□□□ -1.45
CDH12-204ENST00000518209 NT5DC4Q86YG4 428 aa6.01□□□□□ -1.45
CDH12-204ENST00000518209 SNCAIPQ9Y6H5 919 aa6.01□□□□□ -1.45
CDH12-204ENST00000518209 NTF4P34130 210 aa6□□□□□ -1.45
CDH12-204ENST00000518209 PTPN11Q06124 597 aaPredicted RBP6□□□□□ -1.45
CDH12-204ENST00000518209 RAD51AP2Q09MP3 1159 aa6□□□□□ -1.45
CDH12-204ENST00000518209 INPP5AQ14642 412 aa6□□□□□ -1.45
CDH12-204ENST00000518209 SF3A1Q15459 793 aaKnown RBP6□□□□□ -1.45
CDH12-204ENST00000518209 TAF1CQ15572 869 aaPredicted RBP6□□□□□ -1.45
CDH12-204ENST00000518209 ARHGAP27Q6ZUM4 889 aa6□□□□□ -1.45
CDH12-204ENST00000518209 METTL16Q86W50 562 aaKnown RBP6□□□□□ -1.45
CDH12-204ENST00000518209 KSR1Q8IVT5 923 aa6□□□□□ -1.45
CDH12-204ENST00000518209 AGBL5Q8NDL9 886 aa6□□□□□ -1.45
CDH12-204ENST00000518209 ZNF507Q8TCN5 953 aa6□□□□□ -1.45
CDH12-204ENST00000518209 NETO1Q8TDF5 533 aa6□□□□□ -1.45
CDH12-204ENST00000518209 MKNK2Q9HBH9 465 aa6□□□□□ -1.45
CDH12-204ENST00000518209 USP31Q70CQ4 1352 aa5.99□□□□□ -1.45
CDH12-204ENST00000518209 LEFTY1O75610 366 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms