RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 ZNF790Q6PG37 636 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 APBB1IPQ7Z5R6 666 aaPredicted RBP3.51□□□□□ -1.85
SKP1-204ENST00000517691 GLYCTKQ8IVS8 523 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 COL26A1Q96A83 441 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 SGSM3Q96HU1 749 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 SLC4A9Q96Q91 983 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 TSPYL4Q9UJ04 414 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 IQSEC3Q9UPP2 1182 aaPredicted RBP3.51□□□□□ -1.85
SKP1-204ENST00000517691 RGPD1P0DJD0 1748 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 hCG_2014768A0A024R1R8 64 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 STARD3NLO95772 234 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 INHAP05111 366 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 ADD1P35611 737 aaKnown RBP3.51□□□□□ -1.85
SKP1-204ENST00000517691 CHRNA4P43681 627 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 GDF10P55107 478 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 ANAPC15P60006 121 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 CALD1Q05682 793 aaKnown RBP3.51□□□□□ -1.85
SKP1-204ENST00000517691 RAD51AP2Q09MP3 1159 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 ITPK1Q13572 414 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 GRIN2CQ14957 1233 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 TCEAL1Q15170 157 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 LDLRAD1Q5T700 205 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 SMIM5Q71RC9 77 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 DNAJC10Q8IXB1 793 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 LINC00116Q8NCU8 138 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 SCG3Q8WXD2 468 aaKnown RBP3.51□□□□□ -1.85
SKP1-204ENST00000517691 ZNF496Q96IT1 587 aaPredicted RBP3.51□□□□□ -1.85
SKP1-204ENST00000517691 ASB16Q96NS5 453 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 ETNK1Q9HBU6 452 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 CYLDQ9NQC7 956 aa3.51□□□□□ -1.85
SKP1-204ENST00000517691 CEMIPQ8WUJ3 1361 aa3.5□□□□□ -1.85
SKP1-204ENST00000517691 WNK3Q9BYP7 1800 aa3.5□□□□□ -1.85
SKP1-204ENST00000517691 A0A1W2PRU2 124 aa3.5□□□□□ -1.85
SKP1-204ENST00000517691 ZBTB7AO95365 584 aa3.5□□□□□ -1.85
SKP1-204ENST00000517691 GTF2F1P35269 517 aaKnown RBP eCLIP3.5□□□□□ -1.85
SKP1-204ENST00000517691 CRKLP46109 303 aaKnown RBP3.5□□□□□ -1.85
SKP1-204ENST00000517691 IRAK1P51617 712 aa3.5□□□□□ -1.85
SKP1-204ENST00000517691 ZNF827Q17R98 1081 aa3.5□□□□□ -1.85
SKP1-204ENST00000517691 PRSS36Q5K4E3 855 aa3.5□□□□□ -1.85
SKP1-204ENST00000517691 ZNF784Q8NCA9 323 aaPredicted RBP3.5□□□□□ -1.85
SKP1-204ENST00000517691 HELQQ8TDG4 1101 aa3.5□□□□□ -1.85
SKP1-204ENST00000517691 KCNB2Q92953 911 aa3.5□□□□□ -1.85
SKP1-204ENST00000517691 TEX13AQ9BXU3 409 aaPredicted RBP3.5□□□□□ -1.85
SKP1-204ENST00000517691 SAP130Q9H0E3 1048 aa3.5□□□□□ -1.85
SKP1-204ENST00000517691 TSPAN10Q9H1Z9 355 aaPredicted RBP3.5□□□□□ -1.85
SKP1-204ENST00000517691 METTL14Q9HCE5 456 aaKnown RBP3.5□□□□□ -1.85
SKP1-204ENST00000517691 PRKAG2Q9UGJ0 569 aa3.5□□□□□ -1.85
SKP1-204ENST00000517691 SERTAD1Q9UHV2 236 aa3.5□□□□□ -1.85
SKP1-204ENST00000517691 RTCBQ9Y3I0 505 aaKnown RBP3.5□□□□□ -1.85
SKP1-204ENST00000517691 PKD1L3Q7Z443 1732 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 PRAMEF22A3QJZ6 481 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 CHL1O00533 1208 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 MAFGO15525 162 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 OIP5O43482 229 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 SNRPA1P09661 255 aaKnown RBP3.49□□□□□ -1.85
SKP1-204ENST00000517691 CYP19A1P11511 503 aaPredicted RBP3.49□□□□□ -1.85
SKP1-204ENST00000517691 ELNP15502 786 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 EIF2S2P20042 333 aaKnown RBP3.49□□□□□ -1.85
SKP1-204ENST00000517691 FSHRP23945 695 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 MAPK1P28482 360 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 RFC4P35249 363 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 GNAI1P63096 354 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 SNRPNP63162 240 aaKnown RBP3.49□□□□□ -1.85
SKP1-204ENST00000517691 CBLBQ13191 982 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 TRAPPC3LQ5T215 181 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 SPTY2D1Q68D10 685 aaPredicted RBP3.49□□□□□ -1.85
SKP1-204ENST00000517691 NGEFQ8N5V2 710 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 FLAD1Q8NFF5 587 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 MORC4Q8TE76 937 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 PMM1Q92871 262 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 PLCD4Q9BRC7 762 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 PDGFDQ9GZP0 370 aaPredicted RBP3.49□□□□□ -1.85
SKP1-204ENST00000517691 CCDC87Q9NVE4 849 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 CUEDC1Q9NWM3 386 aaPredicted RBP3.49□□□□□ -1.85
SKP1-204ENST00000517691 GABBR1Q9UBS5 961 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 DCTN4Q9UJW0 460 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 USP16Q9Y5T5 823 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 NHSQ6T4R5 1651 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 ELL2O00472 640 aaPredicted RBP3.49□□□□□ -1.85
SKP1-204ENST00000517691 BACH1O14867 736 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 RPS6KA4O75676 772 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 A1BGP04217 495 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 MYL6BP14649 208 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 PIP4K2AP48426 406 aaPredicted RBP3.49□□□□□ -1.85
SKP1-204ENST00000517691 EIF4A1P60842 406 aaKnown RBP3.49□□□□□ -1.85
SKP1-204ENST00000517691 GAS6Q14393 721 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 TBCELQ5QJ74 424 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 PPP1R26Q5T8A7 1209 aaPredicted RBP3.49□□□□□ -1.85
SKP1-204ENST00000517691 MSL1Q68DK7 614 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 INTS5Q6P9B9 1019 aaKnown RBP3.49□□□□□ -1.85
SKP1-204ENST00000517691 COL23A1Q86Y22 540 aaPredicted RBP3.49□□□□□ -1.85
SKP1-204ENST00000517691 TSR2Q969E8 191 aaKnown RBP3.49□□□□□ -1.85
SKP1-204ENST00000517691 PKNOX2Q96KN3 472 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 TINF2Q9BSI4 451 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 SPON1Q9HCB6 807 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 IFT57Q9NWB7 429 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 BABAM1Q9NWV8 329 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 NOP53Q9NZM5 478 aaKnown RBP3.49□□□□□ -1.85
SKP1-204ENST00000517691 SCHIP1Q9P0W5 487 aaPredicted RBP3.49□□□□□ -1.85
SKP1-204ENST00000517691 CHPF2Q9P2E5 772 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms