RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 ZSCAN25Q6NSZ9 544 aa25.51■■□□□ 1.67
MTCL1-204ENST00000517554 ERO1BQ86YB8 467 aa25.51■■□□□ 1.67
MTCL1-204ENST00000517554 REM2Q8IYK8 340 aaPredicted RBP25.51■■□□□ 1.67
MTCL1-204ENST00000517554 OSBP2Q969R2 916 aa25.51■■□□□ 1.67
MTCL1-204ENST00000517554 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.51■■□□□ 1.67
MTCL1-204ENST00000517554 TRPA1O75762 1119 aa25.5■■□□□ 1.67
MTCL1-204ENST00000517554 LBX1P52954 281 aa25.5■■□□□ 1.67
MTCL1-204ENST00000517554 EVX2Q03828 476 aa25.5■■□□□ 1.67
MTCL1-204ENST00000517554 CRNKL1Q9BZJ0 848 aaKnown RBP25.5■■□□□ 1.67
MTCL1-204ENST00000517554 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.5■■□□□ 1.67
MTCL1-204ENST00000517554 DDX60LQ5H9U9 1706 aaKnown RBP25.5■■□□□ 1.67
MTCL1-204ENST00000517554 MANSC4A6NHS7 340 aaPredicted RBP25.49■■□□□ 1.67
MTCL1-204ENST00000517554 RNF113AO15541 343 aaKnown RBP25.49■■□□□ 1.67
MTCL1-204ENST00000517554 PTPN18Q99952 460 aa25.49■■□□□ 1.67
MTCL1-204ENST00000517554 IGF2BP3O00425 579 aaKnown RBP eCLIP25.48■■□□□ 1.67
MTCL1-204ENST00000517554 IRF6O14896 467 aa25.48■■□□□ 1.67
MTCL1-204ENST00000517554 SCYL3Q8IZE3 742 aa25.48■■□□□ 1.67
MTCL1-204ENST00000517554 DCP1AQ9NPI6 582 aaPredicted RBP25.48■■□□□ 1.67
MTCL1-204ENST00000517554 HERC5Q9UII4 1024 aaKnown RBP25.48■■□□□ 1.67
MTCL1-204ENST00000517554 TESPA1A2RU30 521 aaPredicted RBP25.48■■□□□ 1.67
MTCL1-204ENST00000517554 CA12O43570 354 aa25.48■■□□□ 1.67
MTCL1-204ENST00000517554 CTNND1O60716 968 aaKnown RBP25.48■■□□□ 1.67
MTCL1-204ENST00000517554 PDE4AP27815 886 aa25.48■■□□□ 1.67
MTCL1-204ENST00000517554 PLCD1P51178 756 aa25.48■■□□□ 1.67
MTCL1-204ENST00000517554 SREBF2Q12772 1141 aa25.48■■□□□ 1.67
MTCL1-204ENST00000517554 OSBPL3Q9H4L5 887 aa25.48■■□□□ 1.67
MTCL1-204ENST00000517554 JAG1P78504 1218 aa25.47■■□□□ 1.67
MTCL1-204ENST00000517554 PPATQ06203 517 aa25.47■■□□□ 1.67
MTCL1-204ENST00000517554 PPIL2Q13356 520 aa25.47■■□□□ 1.67
MTCL1-204ENST00000517554 FOXP4Q8IVH2 680 aaPredicted RBP25.47■■□□□ 1.67
MTCL1-204ENST00000517554 APPBP2Q92624 585 aa25.47■■□□□ 1.67
MTCL1-204ENST00000517554 SAGE1Q9NXZ1 904 aa25.47■■□□□ 1.67
MTCL1-204ENST00000517554 MYH1P12882 1939 aa25.46■■□□□ 1.67
MTCL1-204ENST00000517554 COL13A1Q5TAT6 717 aaPredicted RBP25.46■■□□□ 1.67
MTCL1-204ENST00000517554 CCDC84Q86UT8 332 aaPredicted RBP25.46■■□□□ 1.67
MTCL1-204ENST00000517554 IFNL1Q8IU54 200 aa25.46■■□□□ 1.67
MTCL1-204ENST00000517554 BRI3BPQ8WY22 251 aa25.46■■□□□ 1.67
MTCL1-204ENST00000517554 STRBPQ96SI9 672 aaKnown RBP25.46■■□□□ 1.67
MTCL1-204ENST00000517554 SEC62Q99442 399 aaKnown RBP25.46■■□□□ 1.67
MTCL1-204ENST00000517554 FSD1Q9BTV5 496 aa25.46■■□□□ 1.67
MTCL1-204ENST00000517554 M0R2C6 588 aa25.45■■□□□ 1.66
MTCL1-204ENST00000517554 ZFYP08048 801 aaPredicted RBP25.45■■□□□ 1.66
MTCL1-204ENST00000517554 PTPRAP18433 802 aa25.45■■□□□ 1.66
MTCL1-204ENST00000517554 INHBEP58166 350 aa25.45■■□□□ 1.66
MTCL1-204ENST00000517554 SHROOM1Q2M3G4 852 aaPredicted RBP25.45■■□□□ 1.66
MTCL1-204ENST00000517554 SMIM22K7EJ46 135 aa25.44■■□□□ 1.66
MTCL1-204ENST00000517554 R3HDMLQ9H3Y0 253 aa25.44■■□□□ 1.66
MTCL1-204ENST00000517554 MCM9Q9NXL9 1143 aa25.44■■□□□ 1.66
MTCL1-204ENST00000517554 NAV1Q8NEY1 1877 aa25.44■■□□□ 1.66
MTCL1-204ENST00000517554 HLA-DOAP06340 250 aa25.44■■□□□ 1.66
MTCL1-204ENST00000517554 CYP2D6P10635 497 aa25.44■■□□□ 1.66
MTCL1-204ENST00000517554 CAP2P40123 477 aa25.44■■□□□ 1.66
MTCL1-204ENST00000517554 GTF2A2P52657 109 aa25.44■■□□□ 1.66
MTCL1-204ENST00000517554 EVI5LQ96CN4 794 aa25.44■■□□□ 1.66
MTCL1-204ENST00000517554 EHD4Q9H223 541 aa25.44■■□□□ 1.66
MTCL1-204ENST00000517554 KCNH4Q9UQ05 1017 aa25.44■■□□□ 1.66
MTCL1-204ENST00000517554 SLC4A4Q9Y6R1 1079 aa25.44■■□□□ 1.66
MTCL1-204ENST00000517554 CCL15-CCL14A0A0B4J2E2 113 aa25.43■■□□□ 1.66
MTCL1-204ENST00000517554 CCL15Q16663 113 aa25.43■■□□□ 1.66
MTCL1-204ENST00000517554 ZMYM1Q5SVZ6 1142 aa25.43■■□□□ 1.66
MTCL1-204ENST00000517554 CRACR2BQ8N4Y2 399 aaPredicted RBP25.43■■□□□ 1.66
MTCL1-204ENST00000517554 PRDM10Q9NQV6 1147 aa25.43■■□□□ 1.66
MTCL1-204ENST00000517554 ATP8A2Q9NTI2 1148 aa25.43■■□□□ 1.66
MTCL1-204ENST00000517554 ZHX2Q9Y6X8 837 aa25.43■■□□□ 1.66
MTCL1-204ENST00000517554 DOCK1Q14185 1865 aa25.43■■□□□ 1.66
MTCL1-204ENST00000517554 TBC1D8O95759 1140 aa25.42■■□□□ 1.66
MTCL1-204ENST00000517554 GABPAQ06546 454 aa25.42■■□□□ 1.66
MTCL1-204ENST00000517554 MOGSQ13724 837 aa25.42■■□□□ 1.66
MTCL1-204ENST00000517554 TTC6Q86TZ1 520 aa25.42■■□□□ 1.66
MTCL1-204ENST00000517554 PICK1Q9NRD5 415 aa25.42■■□□□ 1.66
MTCL1-204ENST00000517554 SERPINB13Q9UIV8 391 aa25.42■■□□□ 1.66
MTCL1-204ENST00000517554 AFG3L2Q9Y4W6 797 aa25.42■■□□□ 1.66
MTCL1-204ENST00000517554 GPAA1O43292 621 aa25.41■■□□□ 1.66
MTCL1-204ENST00000517554 TATDN1Q6P1N9 297 aa25.41■■□□□ 1.66
MTCL1-204ENST00000517554 CYP2D7A0A087X1C5 515 aa25.4■■□□□ 1.66
MTCL1-204ENST00000517554 GSG1L2A8MUP6 293 aa25.4■■□□□ 1.66
MTCL1-204ENST00000517554 POLR3DP05423 398 aaPredicted RBP25.4■■□□□ 1.66
MTCL1-204ENST00000517554 SNAPC2Q13487 334 aa25.4■■□□□ 1.66
MTCL1-204ENST00000517554 FAM43AQ8N2R8 423 aa25.4■■□□□ 1.66
MTCL1-204ENST00000517554 PHIPQ8WWQ0 1821 aa25.4■■□□□ 1.66
MTCL1-204ENST00000517554 GDF11O95390 407 aa25.39■■□□□ 1.66
MTCL1-204ENST00000517554 SHMT1P34896 483 aa25.39■■□□□ 1.66
MTCL1-204ENST00000517554 CFHR5Q9BXR6 569 aa25.39■■□□□ 1.66
MTCL1-204ENST00000517554 USP17L12C9JPN9 530 aa25.39■■□□□ 1.65
MTCL1-204ENST00000517554 USP17L21D6R901 530 aa25.39■■□□□ 1.65
MTCL1-204ENST00000517554 LRRFIP1Q32MZ4 808 aaKnown RBP25.39■■□□□ 1.65
MTCL1-204ENST00000517554 EPB41L4AQ9HCS5 686 aaPredicted RBP25.39■■□□□ 1.65
MTCL1-204ENST00000517554 CETPP11597 493 aa25.38■■□□□ 1.65
MTCL1-204ENST00000517554 C12orf60Q5U649 245 aa25.38■■□□□ 1.65
MTCL1-204ENST00000517554 CTR9Q6PD62 1173 aa25.38■■□□□ 1.65
MTCL1-204ENST00000517554 DYNLL2Q96FJ2 89 aa25.38■■□□□ 1.65
MTCL1-204ENST00000517554 TRIM34Q9BYJ4 488 aa25.38■■□□□ 1.65
MTCL1-204ENST00000517554 BAZ2AQ9UIF9 1905 aaKnown RBP25.37■■□□□ 1.65
MTCL1-204ENST00000517554 TRIM6-TRIM34B2RNG4 842 aa25.37■■□□□ 1.65
MTCL1-204ENST00000517554 BTBD19C9JJ37 291 aa25.37■■□□□ 1.65
MTCL1-204ENST00000517554 CXCL11O14625 94 aa25.37■■□□□ 1.65
MTCL1-204ENST00000517554 CCDC129Q6ZRS4 1044 aa25.37■■□□□ 1.65
MTCL1-204ENST00000517554 SLC44A5Q8NCS7 719 aa25.37■■□□□ 1.65
MTCL1-204ENST00000517554 ATAD5Q96QE3 1844 aa25.37■■□□□ 1.65
MTCL1-204ENST00000517554 FOXP2O15409 715 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms