RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 FANCGO15287 622 aa9.18□□□□□ -0.94
SCARNA1-201ENST00000517138 GRIK1P39086 918 aa9.18□□□□□ -0.94
SCARNA1-201ENST00000517138 NKG7Q16617 165 aa9.18□□□□□ -0.94
SCARNA1-201ENST00000517138 INTS5Q6P9B9 1019 aaKnown RBP9.18□□□□□ -0.94
SCARNA1-201ENST00000517138 BNC2Q6ZN30 1099 aaPredicted RBP9.18□□□□□ -0.94
SCARNA1-201ENST00000517138 HDXQ7Z353 690 aa9.18□□□□□ -0.94
SCARNA1-201ENST00000517138 MIR1-1HGQ9H1L0 117 aa9.18□□□□□ -0.94
SCARNA1-201ENST00000517138 ZC3H7BQ9UGR2 993 aaKnown RBP9.18□□□□□ -0.94
SCARNA1-201ENST00000517138 PF4P02776 101 aa9.17□□□□□ -0.94
SCARNA1-201ENST00000517138 LMNB1P20700 586 aa9.17□□□□□ -0.94
SCARNA1-201ENST00000517138 DUSP27Q5VZP5 1158 aa9.17□□□□□ -0.94
SCARNA1-201ENST00000517138 FAM181AQ8N9Y4 354 aa9.17□□□□□ -0.94
SCARNA1-201ENST00000517138 RHOVQ96L33 236 aa9.17□□□□□ -0.94
SCARNA1-201ENST00000517138 MINDY4BA8MYZ0 360 aa9.16□□□□□ -0.94
SCARNA1-201ENST00000517138 FAM160A1Q05DH4 1040 aa9.16□□□□□ -0.94
SCARNA1-201ENST00000517138 CAMK2GQ13555 558 aaPredicted RBP9.16□□□□□ -0.94
SCARNA1-201ENST00000517138 NFXL1Q6ZNB6 911 aa9.16□□□□□ -0.94
SCARNA1-201ENST00000517138 WNT10AQ9GZT5 417 aa9.16□□□□□ -0.94
SCARNA1-201ENST00000517138 SNCAIPQ9Y6H5 919 aa9.16□□□□□ -0.94
SCARNA1-201ENST00000517138 GRK4P32298 578 aa9.15□□□□□ -0.94
SCARNA1-201ENST00000517138 GBP2P32456 591 aaPredicted RBP9.15□□□□□ -0.94
SCARNA1-201ENST00000517138 CYP27A1Q02318 531 aa9.15□□□□□ -0.94
SCARNA1-201ENST00000517138 SLBPQ14493 270 aaKnown RBP eCLIP9.15□□□□□ -0.94
SCARNA1-201ENST00000517138 CPSF6Q16630 551 aaKnown RBP eCLIP9.15□□□□□ -0.94
SCARNA1-201ENST00000517138 NBPF11Q86T75 865 aa9.15□□□□□ -0.94
SCARNA1-201ENST00000517138 TMEM74Q96NL1 305 aa9.15□□□□□ -0.94
SCARNA1-201ENST00000517138 KBTBD4Q9NVX7 518 aa9.15□□□□□ -0.94
SCARNA1-201ENST00000517138 F13A1P00488 732 aa9.14□□□□□ -0.95
SCARNA1-201ENST00000517138 ETF1P62495 437 aaKnown RBP9.14□□□□□ -0.95
SCARNA1-201ENST00000517138 CDC37L1Q7L3B6 337 aa9.14□□□□□ -0.95
SCARNA1-201ENST00000517138 ARMCX6Q7L4S7 300 aa9.14□□□□□ -0.95
SCARNA1-201ENST00000517138 FAM214BQ7L5A3 538 aa9.14□□□□□ -0.95
SCARNA1-201ENST00000517138 ERMP1Q7Z2K6 904 aa9.14□□□□□ -0.95
SCARNA1-201ENST00000517138 ZNF507Q8TCN5 953 aa9.14□□□□□ -0.95
SCARNA1-201ENST00000517138 HEXIM2Q96MH2 286 aaKnown RBP9.14□□□□□ -0.95
SCARNA1-201ENST00000517138 RSRP1Q9BUV0 290 aa9.14□□□□□ -0.95
SCARNA1-201ENST00000517138 CORINQ9Y5Q5 1042 aa9.14□□□□□ -0.95
SCARNA1-201ENST00000517138 CNTNAP4Q9C0A0 1308 aa9.13□□□□□ -0.95
SCARNA1-201ENST00000517138 FAM221AA4D161 298 aa9.13□□□□□ -0.95
SCARNA1-201ENST00000517138 RLBP1P12271 317 aa9.13□□□□□ -0.95
SCARNA1-201ENST00000517138 GARTP22102 1010 aa9.13□□□□□ -0.95
SCARNA1-201ENST00000517138 LMNB2Q03252 620 aa9.13□□□□□ -0.95
SCARNA1-201ENST00000517138 TSNAXIP1Q2TAA8 658 aa9.13□□□□□ -0.95
SCARNA1-201ENST00000517138 CYP27C1Q4G0S4 372 aa9.13□□□□□ -0.95
SCARNA1-201ENST00000517138 PLD6Q8N2A8 252 aaKnown RBP9.13□□□□□ -0.95
SCARNA1-201ENST00000517138 FBXO27Q8NI29 283 aa9.13□□□□□ -0.95
SCARNA1-201ENST00000517138 PRDM10Q9NQV6 1147 aa9.13□□□□□ -0.95
SCARNA1-201ENST00000517138 RPL6Q02878 288 aaKnown RBP9.12□□□□□ -0.95
SCARNA1-201ENST00000517138 RELL1Q8IUW5 271 aa9.12□□□□□ -0.95
SCARNA1-201ENST00000517138 RBM47A0AV96 593 aaKnown RBP9.11□□□□□ -0.95
SCARNA1-201ENST00000517138 CILPO75339 1184 aa9.11□□□□□ -0.95
SCARNA1-201ENST00000517138 SLITRK5O94991 958 aa9.11□□□□□ -0.95
SCARNA1-201ENST00000517138 EOMESO95936 686 aa9.11□□□□□ -0.95
SCARNA1-201ENST00000517138 RIN3Q8TB24 985 aa9.11□□□□□ -0.95
SCARNA1-201ENST00000517138 XAGE3Q8WTP9 111 aa9.11□□□□□ -0.95
SCARNA1-201ENST00000517138 DPH2Q9BQC3 489 aaPredicted RBP9.11□□□□□ -0.95
SCARNA1-201ENST00000517138 BACH2Q9BYV9 841 aa9.11□□□□□ -0.95
SCARNA1-201ENST00000517138 TJP2Q9UDY2 1190 aa9.11□□□□□ -0.95
SCARNA1-201ENST00000517138 CCDC39Q9UFE4 941 aa9.11□□□□□ -0.95
SCARNA1-201ENST00000517138 OAS3Q9Y6K5 1087 aaKnown RBP9.11□□□□□ -0.95
SCARNA1-201ENST00000517138 OXCT1P55809 520 aa9.1□□□□□ -0.95
SCARNA1-201ENST00000517138 FBXL19Q6PCT2 694 aa9.1□□□□□ -0.95
SCARNA1-201ENST00000517138 GOLM1Q8NBJ4 401 aa9.1□□□□□ -0.95
SCARNA1-201ENST00000517138 TMEM87AQ8NBN3 555 aa9.1□□□□□ -0.95
SCARNA1-201ENST00000517138 GATAD2BQ8WXI9 593 aa9.1□□□□□ -0.95
SCARNA1-201ENST00000517138 PLAGL2Q9UPG8 496 aa9.1□□□□□ -0.95
SCARNA1-201ENST00000517138 LRIG2O94898 1065 aa9.09□□□□□ -0.95
SCARNA1-201ENST00000517138 PGRP06401 933 aa9.09□□□□□ -0.95
SCARNA1-201ENST00000517138 GP2P55259 537 aaKnown RBP9.09□□□□□ -0.95
SCARNA1-201ENST00000517138 PRAMEF13Q5VWM6 474 aa9.09□□□□□ -0.95
SCARNA1-201ENST00000517138 WFDC3Q8IUB2 231 aa9.09□□□□□ -0.95
SCARNA1-201ENST00000517138 HID1Q8IV36 788 aa9.09□□□□□ -0.95
SCARNA1-201ENST00000517138 KCT2Q8NC54 265 aa9.09□□□□□ -0.95
SCARNA1-201ENST00000517138 FOXQ1Q9C009 403 aa9.09□□□□□ -0.95
SCARNA1-201ENST00000517138 POLR3KQ9Y2Y1 108 aaPredicted RBP9.09□□□□□ -0.95
SCARNA1-201ENST00000517138 TLR3O15455 904 aaKnown RBP9.08□□□□□ -0.96
SCARNA1-201ENST00000517138 WNT11O96014 354 aa9.08□□□□□ -0.96
SCARNA1-201ENST00000517138 PRNPP04156 253 aa9.08□□□□□ -0.96
SCARNA1-201ENST00000517138 BNIP3Q12983 259 aa9.08□□□□□ -0.96
SCARNA1-201ENST00000517138 SNAP47Q5SQN1 464 aa9.08□□□□□ -0.96
SCARNA1-201ENST00000517138 ZNF574Q6ZN55 896 aaPredicted RBP9.08□□□□□ -0.96
SCARNA1-201ENST00000517138 CCDC84Q86UT8 332 aaPredicted RBP9.08□□□□□ -0.96
SCARNA1-201ENST00000517138 ACSF2Q96CM8 615 aaPredicted RBP9.08□□□□□ -0.96
SCARNA1-201ENST00000517138 MIPEPQ99797 713 aa9.08□□□□□ -0.96
SCARNA1-201ENST00000517138 BSDC1Q9NW68 430 aaPredicted RBP9.08□□□□□ -0.96
SCARNA1-201ENST00000517138 GGT7Q9UJ14 662 aa9.08□□□□□ -0.96
SCARNA1-201ENST00000517138 UPK3BL1B0FP48 263 aa9.07□□□□□ -0.96
SCARNA1-201ENST00000517138 UPK3BL2E5RIL1 263 aa9.07□□□□□ -0.96
SCARNA1-201ENST00000517138 GRIN3BO60391 1043 aa9.07□□□□□ -0.96
SCARNA1-201ENST00000517138 ITIH2P19823 946 aa9.07□□□□□ -0.96
SCARNA1-201ENST00000517138 CD96P40200 585 aa9.07□□□□□ -0.96
SCARNA1-201ENST00000517138 ADAMTS1Q9UHI8 967 aa9.07□□□□□ -0.96
SCARNA1-201ENST00000517138 PRR33A8MZF0 331 aa9.06□□□□□ -0.96
SCARNA1-201ENST00000517138 CST3P01034 146 aaPredicted RBP9.06□□□□□ -0.96
SCARNA1-201ENST00000517138 CAP2P40123 477 aa9.06□□□□□ -0.96
SCARNA1-201ENST00000517138 PWP1Q13610 501 aa9.06□□□□□ -0.96
SCARNA1-201ENST00000517138 SPRED2Q7Z698 418 aa9.06□□□□□ -0.96
SCARNA1-201ENST00000517138 RGS22Q8NE09 1264 aa9.06□□□□□ -0.96
SCARNA1-201ENST00000517138 NETO1Q8TDF5 533 aa9.06□□□□□ -0.96
SCARNA1-201ENST00000517138 TMEM87BQ96K49 555 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms