RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 TWISTNBQ3B726 338 aaPredicted RBP2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 CCDC30Q5VVM6 783 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 FIGNL1Q6PIW4 674 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 BTLAQ7Z6A9 289 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 DNAJC10Q8IXB1 793 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ETFBKMTQ8IXQ9 262 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 FLAD1Q8NFF5 587 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 FOXD4L4Q8WXT5 416 aaPredicted RBP2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 TSR2Q969E8 191 aaKnown RBP2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 NUCKS1Q9H1E3 243 aaKnown RBP2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 DDX21Q9NR30 783 aaKnown RBP eCLIP2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 LRRC4BQ9NT99 713 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 CCDC87Q9NVE4 849 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 DBF4Q9UBU7 674 aaPredicted RBP2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 DCTN4Q9UJW0 460 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 CCNL1Q9UK58 526 aaPredicted RBP2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 POLIQ9UNA4 740 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 FNDC3AQ9Y2H6 1198 aaKnown RBP2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ZBTB1Q9Y2K1 713 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 USP20Q9Y2K6 914 aa2.8□□□□□ -1.96
SCARNA16.3-201ENST00000516595 RIC1Q4ADV7 1423 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 RNF123Q5XPI4 1314 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 A0A087WZG4 1122 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 SLC35F4A4IF30 521 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ERVV-1B6SEH8 477 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 TGFBR3LH3BV60 316 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 TNFRSF10BO14763 440 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 RPS6KA4O75676 772 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 RPLP1P05386 114 aaKnown RBP2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ATP4AP20648 1035 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 MZF1P28698 734 aaPredicted RBP2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 USP5P45974 858 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ARSDP51689 593 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 RARSP54136 660 aaKnown RBP2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ARHGAP4P98171 946 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 EZH2Q15910 746 aaKnown RBP2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 SLC15A2Q16348 729 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 DBN1Q16643 649 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 KRT24Q2M2I5 525 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 FAM26DQ5JW98 314 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 INTS5Q6P9B9 1019 aaKnown RBP2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 CLEC4GQ6UXB4 293 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 DEFB132Q7Z7B7 95 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 NLRP8Q86W28 1048 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 VWA5B2Q8N398 1253 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 TSPYL6Q8N831 410 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 C8orf58Q8NAV2 365 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 LINC00116Q8NCU8 138 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 SLC16A10Q8TF71 515 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ARHGAP45Q92619 1136 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 TRIM47Q96LD4 638 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 TRERF1Q96PN7 1200 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 PNMA5Q96PV4 448 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 STK31Q9BXU1 1019 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ZCCHC2Q9C0B9 1178 aaKnown RBP2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 NIF3L1Q9GZT8 377 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 BCL11AQ9H165 835 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 IGFLR1Q9H665 355 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 BRD7Q9NPI1 651 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 HYPKQ9NX55 129 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 MIS18AQ9NYP9 233 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 BCS1LQ9Y276 419 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 RTCBQ9Y3I0 505 aaKnown RBP2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 PCDHGC4Q9Y5F7 938 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 USP16Q9Y5T5 823 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 GPC6Q9Y625 555 aaPredicted RBP2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 UBR3Q6ZT12 1888 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 BCORQ6W2J9 1755 aa2.79□□□□□ -1.96
SCARNA16.3-201ENST00000516595 CACNA1FO60840 1977 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 MYH14Q7Z406 1995 aaKnown RBP2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ABCC4O15439 1325 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 MAP3K15Q6ZN16 1313 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 PNPLA7Q6ZV29 1317 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 USP42Q9H9J4 1324 aaKnown RBP2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 DCDC2BA2VCK2 349 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 PRAMEF22A3QJZ6 481 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 OPLAHO14841 1288 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 XYLBO75191 536 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 DDX58O95786 925 aaKnown RBP2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 NEFLP07196 543 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 NPR3P17342 541 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ERCC3P19447 782 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ITGA6P23229 1130 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 MAPK8P45983 427 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 RBM25P49756 843 aaKnown RBP2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 VEGFBP49765 207 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 TRIM28Q13263 835 aaKnown RBP2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ZNF827Q17R98 1081 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 PARP10Q53GL7 1025 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 HSP90AB3PQ58FF7 597 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 TTC39BQ5VTQ0 682 aaPredicted RBP2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ZNF787Q6DD87 383 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 SV2AQ7L0J3 742 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 KRT25Q7Z3Z0 450 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ZNF438Q7Z4V0 828 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 NPM2Q86SE8 214 aaKnown RBP2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 TRIM22Q8IYM9 498 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ZNF295-AS1Q8N0V1 137 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 PLBD2Q8NHP8 589 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 C7orf43Q8WVR3 580 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms