RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 SLFNL1Q499Z3 407 aa0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 LCE3AQ5TA76 89 aa0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 PEAR1Q5VY43 1037 aaPredicted RBP0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 LIPIQ6XZB0 460 aa0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 TMPRSS7Q7RTY8 843 aa0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 LIMS2Q7Z4I7 341 aa0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 VN1R5Q7Z5H4 357 aa0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 CMTR1Q8N1G2 835 aaKnown RBP0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 TOP6BLQ8N6T0 577 aa0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 C1orf127Q8N9H9 656 aa0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 MZB1Q8WU39 189 aa0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 CFAP44Q96MT7 982 aa0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 CDK5RAP1Q96SZ6 601 aaKnown RBP0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 C2orf49Q9BVC5 232 aaPredicted RBP0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 PDGFDQ9GZP0 370 aaPredicted RBP0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 CWC22Q9HCG8 908 aaKnown RBP0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 CHMP3Q9Y3E7 222 aa0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 DMRT1Q9Y5R6 373 aa0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 TACC3Q9Y6A5 838 aa0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 MASP2O00187 686 aa0.95□□□□□ -2.26
RNU6-542P-201ENST00000516405 TRPA1O75762 1119 aa0.95□□□□□ -2.26
RNU6-542P-201ENST00000516405 ACPPP15309 386 aa0.95□□□□□ -2.26
RNU6-542P-201ENST00000516405 HOXB6P17509 224 aaKnown RBP0.95□□□□□ -2.26
RNU6-542P-201ENST00000516405 VIPR1P32241 457 aa0.95□□□□□ -2.26
RNU6-542P-201ENST00000516405 C21orf58P58505 322 aa0.95□□□□□ -2.26
RNU6-542P-201ENST00000516405 IKBKEQ14164 716 aa0.95□□□□□ -2.26
RNU6-542P-201ENST00000516405 KRTAP27-1Q3LI81 207 aa0.95□□□□□ -2.26
RNU6-542P-201ENST00000516405 ZNF585AQ6P3V2 769 aa0.95□□□□□ -2.26
RNU6-542P-201ENST00000516405 NLRP13Q86W25 1043 aa0.95□□□□□ -2.26
RNU6-542P-201ENST00000516405 RGL4Q8IZJ4 473 aa0.95□□□□□ -2.26
RNU6-542P-201ENST00000516405 PRDM14Q9GZV8 571 aa0.95□□□□□ -2.26
RNU6-542P-201ENST00000516405 SOX17Q9H6I2 414 aaPredicted RBP0.95□□□□□ -2.26
RNU6-542P-201ENST00000516405 PRR33A8MZF0 331 aa0.94□□□□□ -2.26
RNU6-542P-201ENST00000516405 H3BS24 57 aa0.94□□□□□ -2.26
RNU6-542P-201ENST00000516405 PPP1R12BO60237 982 aaPredicted RBP0.94□□□□□ -2.26
RNU6-542P-201ENST00000516405 ZNF202O95125 648 aa0.94□□□□□ -2.26
RNU6-542P-201ENST00000516405 ECEL1O95672 775 aa0.94□□□□□ -2.26
RNU6-542P-201ENST00000516405 CYP2E1P05181 493 aaPredicted RBP0.94□□□□□ -2.26
RNU6-542P-201ENST00000516405 ZNF37AP17032 561 aaPredicted RBP0.94□□□□□ -2.26
RNU6-542P-201ENST00000516405 GSTM4Q03013 218 aa0.94□□□□□ -2.26
RNU6-542P-201ENST00000516405 FOXE3Q13461 319 aa0.94□□□□□ -2.26
RNU6-542P-201ENST00000516405 TRIP4Q15650 581 aaPredicted RBP0.94□□□□□ -2.26
RNU6-542P-201ENST00000516405 MIIPQ5JXC2 388 aa0.94□□□□□ -2.26
RNU6-542P-201ENST00000516405 LILRA2Q8N149 483 aa0.94□□□□□ -2.26
RNU6-542P-201ENST00000516405 PLPP7Q8NBV4 271 aa0.94□□□□□ -2.26
RNU6-542P-201ENST00000516405 ZNF526Q8TF50 670 aaPredicted RBP0.94□□□□□ -2.26
RNU6-542P-201ENST00000516405 ZNF503Q96F45 646 aa0.94□□□□□ -2.26
RNU6-542P-201ENST00000516405 ADARB2Q9NS39 739 aaKnown RBP0.94□□□□□ -2.26
RNU6-542P-201ENST00000516405 OR14I1A6ND48 311 aa0.93□□□□□ -2.26
RNU6-542P-201ENST00000516405 HRKO00198 91 aa0.93□□□□□ -2.26
RNU6-542P-201ENST00000516405 EFEMP2O95967 443 aa0.93□□□□□ -2.26
RNU6-542P-201ENST00000516405 ESR1P03372 595 aa0.93□□□□□ -2.26
RNU6-542P-201ENST00000516405 BMP5P22003 454 aa0.93□□□□□ -2.26
RNU6-542P-201ENST00000516405 MAOBP27338 520 aa0.93□□□□□ -2.26
RNU6-542P-201ENST00000516405 SCNN1AP37088 669 aa0.93□□□□□ -2.26
RNU6-542P-201ENST00000516405 MAP7D1Q3KQU3 841 aa0.93□□□□□ -2.26
RNU6-542P-201ENST00000516405 CDKAL1Q5VV42 579 aa0.93□□□□□ -2.26
RNU6-542P-201ENST00000516405 LARP1Q6PKG0 1096 aaKnown RBP0.93□□□□□ -2.26
RNU6-542P-201ENST00000516405 KRTAP5-5Q701N2 237 aaPredicted RBP0.93□□□□□ -2.26
RNU6-542P-201ENST00000516405 SMYD4Q8IYR2 804 aaPredicted RBP0.93□□□□□ -2.26
RNU6-542P-201ENST00000516405 STAG2Q8N3U4 1231 aa0.93□□□□□ -2.26
RNU6-542P-201ENST00000516405 PDZD8Q8NEN9 1154 aa0.93□□□□□ -2.26
RNU6-542P-201ENST00000516405 NEU4Q8WWR8 484 aaPredicted RBP0.93□□□□□ -2.26
RNU6-542P-201ENST00000516405 WWC2-AS2Q96NR7 200 aa0.93□□□□□ -2.26
RNU6-542P-201ENST00000516405 RAD18Q9NS91 495 aa0.93□□□□□ -2.26
RNU6-542P-201ENST00000516405 GTF2IRD1Q9UHL9 959 aa0.93□□□□□ -2.26
RNU6-542P-201ENST00000516405 PCDHA5Q9Y5H7 936 aa0.93□□□□□ -2.26
RNU6-542P-201ENST00000516405 ST14Q9Y5Y6 855 aa0.93□□□□□ -2.26
RNU6-542P-201ENST00000516405 PDE2AO00408 941 aaPredicted RBP0.92□□□□□ -2.26
RNU6-542P-201ENST00000516405 TMPRSS2O15393 492 aa0.92□□□□□ -2.26
RNU6-542P-201ENST00000516405 ESRRAP11474 423 aaPredicted RBP0.92□□□□□ -2.26
RNU6-542P-201ENST00000516405 RASA1P20936 1047 aa0.92□□□□□ -2.26
RNU6-542P-201ENST00000516405 NCKAP1LP55160 1127 aa0.92□□□□□ -2.26
RNU6-542P-201ENST00000516405 GTF2IP78347 998 aa0.92□□□□□ -2.26
RNU6-542P-201ENST00000516405 DAB2P98082 770 aa0.92□□□□□ -2.26
RNU6-542P-201ENST00000516405 PDE3BQ13370 1112 aa0.92□□□□□ -2.26
RNU6-542P-201ENST00000516405 DGKZQ13574 1117 aa0.92□□□□□ -2.26
RNU6-542P-201ENST00000516405 NR0B2Q15466 257 aa0.92□□□□□ -2.26
RNU6-542P-201ENST00000516405 ADGRF1Q5T601 910 aa0.92□□□□□ -2.26
RNU6-542P-201ENST00000516405 LDHDQ86WU2 507 aa0.92□□□□□ -2.26
RNU6-542P-201ENST00000516405 PPP1R13LQ8WUF5 828 aa0.92□□□□□ -2.26
RNU6-542P-201ENST00000516405 PPP1R10Q96QC0 940 aaKnown RBP0.92□□□□□ -2.26
RNU6-542P-201ENST00000516405 WDR18Q9BV38 432 aa0.92□□□□□ -2.26
RNU6-542P-201ENST00000516405 RSPH6AQ9H0K4 717 aa0.92□□□□□ -2.26
RNU6-542P-201ENST00000516405 ATAD2Q6PL18 1390 aa0.92□□□□□ -2.26
RNU6-542P-201ENST00000516405 A0A0A6YYK5 440 aaPredicted RBP0.91□□□□□ -2.26
RNU6-542P-201ENST00000516405 SH3D21A4FU49 640 aa0.91□□□□□ -2.26
RNU6-542P-201ENST00000516405 GNAT3A8MTJ3 354 aa0.91□□□□□ -2.26
RNU6-542P-201ENST00000516405 BUB1BO60566 1050 aaPredicted RBP0.91□□□□□ -2.26
RNU6-542P-201ENST00000516405 EOMESO95936 686 aa0.91□□□□□ -2.26
RNU6-542P-201ENST00000516405 PLA2G1BP04054 148 aaKnown RBP0.91□□□□□ -2.26
RNU6-542P-201ENST00000516405 ZGLP1P0C6A0 271 aa0.91□□□□□ -2.26
RNU6-542P-201ENST00000516405 SDHBP21912 280 aa0.91□□□□□ -2.26
RNU6-542P-201ENST00000516405 MCM7P33993 719 aa0.91□□□□□ -2.26
RNU6-542P-201ENST00000516405 ADRA1BP35368 520 aa0.91□□□□□ -2.26
RNU6-542P-201ENST00000516405 LIMS1P48059 325 aa0.91□□□□□ -2.26
RNU6-542P-201ENST00000516405 KRTAP10-8P60410 259 aa0.91□□□□□ -2.26
RNU6-542P-201ENST00000516405 YBX1P67809 324 aaKnown RBP0.91□□□□□ -2.26
RNU6-542P-201ENST00000516405 DLX2Q07687 328 aaPredicted RBP0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms