RNA–Protein interactions for RNA: ENST00000515981.1

SCARNA16-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16-201ENST00000515981 MKRN3Q13064 507 aaKnown RBP11.64□□□□□ -0.55
SCARNA16-201ENST00000515981 SHROOM1Q2M3G4 852 aaPredicted RBP11.64□□□□□ -0.55
SCARNA16-201ENST00000515981 DCAF15Q66K64 600 aa11.64□□□□□ -0.55
SCARNA16-201ENST00000515981 CYP4F22Q6NT55 531 aa11.64□□□□□ -0.55
SCARNA16-201ENST00000515981 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.64□□□□□ -0.55
SCARNA16-201ENST00000515981 CNKSR2Q8WXI2 1034 aa11.64□□□□□ -0.55
SCARNA16-201ENST00000515981 WRNIP1Q96S55 665 aa11.64□□□□□ -0.55
SCARNA16-201ENST00000515981 DHX36Q9H2U1 1008 aaKnown RBP11.64□□□□□ -0.55
SCARNA16-201ENST00000515981 DNAJC18Q9H819 358 aa11.64□□□□□ -0.55
SCARNA16-201ENST00000515981 ELP3Q9H9T3 547 aa11.64□□□□□ -0.55
SCARNA16-201ENST00000515981 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.64□□□□□ -0.55
SCARNA16-201ENST00000515981 CCDC171Q6TFL3 1326 aa11.63□□□□□ -0.55
SCARNA16-201ENST00000515981 FOCADQ5VW36 1801 aa11.63□□□□□ -0.55
SCARNA16-201ENST00000515981 HLA-DOAP06340 250 aa11.63□□□□□ -0.55
SCARNA16-201ENST00000515981 HSPD1P10809 573 aaKnown RBP11.63□□□□□ -0.55
SCARNA16-201ENST00000515981 GNAT2P19087 354 aa11.63□□□□□ -0.55
SCARNA16-201ENST00000515981 TDO2P48775 406 aa11.63□□□□□ -0.55
SCARNA16-201ENST00000515981 VEGFBP49765 207 aa11.63□□□□□ -0.55
SCARNA16-201ENST00000515981 ZNF157P51786 506 aaPredicted RBP11.63□□□□□ -0.55
SCARNA16-201ENST00000515981 FKBP1BP68106 108 aa11.63□□□□□ -0.55
SCARNA16-201ENST00000515981 MAP3K11Q16584 847 aa11.63□□□□□ -0.55
SCARNA16-201ENST00000515981 C12orf60Q5U649 245 aa11.63□□□□□ -0.55
SCARNA16-201ENST00000515981 RGMBQ6NW40 437 aa11.63□□□□□ -0.55
SCARNA16-201ENST00000515981 TTC6Q86TZ1 520 aa11.63□□□□□ -0.55
SCARNA16-201ENST00000515981 TICAM2Q86XR7 235 aa11.63□□□□□ -0.55
SCARNA16-201ENST00000515981 FOXP4Q8IVH2 680 aaPredicted RBP11.63□□□□□ -0.55
SCARNA16-201ENST00000515981 CRACR2BQ8N4Y2 399 aaPredicted RBP11.63□□□□□ -0.55
SCARNA16-201ENST00000515981 SLC44A5Q8NCS7 719 aa11.63□□□□□ -0.55
SCARNA16-201ENST00000515981 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.63□□□□□ -0.55
SCARNA16-201ENST00000515981 HOOK2Q96ED9 719 aa11.63□□□□□ -0.55
SCARNA16-201ENST00000515981 SLC10A4Q96EP9 437 aa11.63□□□□□ -0.55
SCARNA16-201ENST00000515981 ZIC5Q96T25 663 aa11.63□□□□□ -0.55
SCARNA16-201ENST00000515981 INCENPQ9NQS7 918 aa11.63□□□□□ -0.55
SCARNA16-201ENST00000515981 ZNF112Q9UJU3 913 aa11.63□□□□□ -0.55
SCARNA16-201ENST00000515981 RASSF10A6NK89 507 aa11.62□□□□□ -0.55
SCARNA16-201ENST00000515981 TBC1D12O60347 775 aa11.62□□□□□ -0.55
SCARNA16-201ENST00000515981 AOC2O75106 756 aa11.62□□□□□ -0.55
SCARNA16-201ENST00000515981 FGAP02671 866 aa11.62□□□□□ -0.55
SCARNA16-201ENST00000515981 PTH1RQ03431 593 aa11.62□□□□□ -0.55
SCARNA16-201ENST00000515981 VGLL4Q14135 290 aa11.62□□□□□ -0.55
SCARNA16-201ENST00000515981 CCDC84Q86UT8 332 aaPredicted RBP11.62□□□□□ -0.55
SCARNA16-201ENST00000515981 METTL16Q86W50 562 aaKnown RBP11.62□□□□□ -0.55
SCARNA16-201ENST00000515981 DNAJC5GQ8N7S2 189 aa11.62□□□□□ -0.55
SCARNA16-201ENST00000515981 DDRGK1Q96HY6 314 aa11.62□□□□□ -0.55
SCARNA16-201ENST00000515981 TRIM34Q9BYJ4 488 aa11.62□□□□□ -0.55
SCARNA16-201ENST00000515981 NAPBQ9H115 298 aa11.62□□□□□ -0.55
SCARNA16-201ENST00000515981 SIPA1L1O43166 1804 aa11.62□□□□□ -0.55
SCARNA16-201ENST00000515981 COL2A1P02458 1487 aaPredicted RBP11.62□□□□□ -0.55
SCARNA16-201ENST00000515981 PAPPA2Q9BXP8 1791 aa11.62□□□□□ -0.55
SCARNA16-201ENST00000515981 NAV1Q8NEY1 1877 aa11.61□□□□□ -0.55
SCARNA16-201ENST00000515981 FAM155AB1AL88 458 aaPredicted RBP11.61□□□□□ -0.55
SCARNA16-201ENST00000515981 SGSM2O43147 1006 aa11.61□□□□□ -0.55
SCARNA16-201ENST00000515981 GDF11O95390 407 aa11.61□□□□□ -0.55
SCARNA16-201ENST00000515981 SHMT1P34896 483 aa11.61□□□□□ -0.55
SCARNA16-201ENST00000515981 GJA5P36382 358 aa11.61□□□□□ -0.55
SCARNA16-201ENST00000515981 CTDSPL2Q05D32 466 aa11.61□□□□□ -0.55
SCARNA16-201ENST00000515981 GABPAQ06546 454 aa11.61□□□□□ -0.55
SCARNA16-201ENST00000515981 SBK1Q52WX2 424 aa11.61□□□□□ -0.55
SCARNA16-201ENST00000515981 GIMAP6Q6P9H5 292 aa11.61□□□□□ -0.55
SCARNA16-201ENST00000515981 RASAL3Q86YV0 1011 aa11.61□□□□□ -0.55
SCARNA16-201ENST00000515981 ANKRD13AQ8IZ07 590 aa11.61□□□□□ -0.55
SCARNA16-201ENST00000515981 CAPNS2Q96L46 248 aa11.61□□□□□ -0.55
SCARNA16-201ENST00000515981 NACAP1Q9BZK3 213 aa11.61□□□□□ -0.55
SCARNA16-201ENST00000515981 SERPINB13Q9UIV8 391 aa11.61□□□□□ -0.55
SCARNA16-201ENST00000515981 TACC3Q9Y6A5 838 aa11.61□□□□□ -0.55
SCARNA16-201ENST00000515981 SNCAIPQ9Y6H5 919 aa11.61□□□□□ -0.55
SCARNA16-201ENST00000515981 CDC45O75419 566 aa11.6□□□□□ -0.55
SCARNA16-201ENST00000515981 CDK8P49336 464 aa11.6□□□□□ -0.55
SCARNA16-201ENST00000515981 HAND2P61296 217 aa11.6□□□□□ -0.55
SCARNA16-201ENST00000515981 ALX1Q15699 326 aa11.6□□□□□ -0.55
SCARNA16-201ENST00000515981 RUFY2Q8WXA3 655 aa11.6□□□□□ -0.55
SCARNA16-201ENST00000515981 ESYT1Q9BSJ8 1104 aa11.6□□□□□ -0.55
SCARNA16-201ENST00000515981 EHD4Q9H223 541 aa11.6□□□□□ -0.55
SCARNA16-201ENST00000515981 HERC5Q9UII4 1024 aaKnown RBP11.6□□□□□ -0.55
SCARNA16-201ENST00000515981 CSADQ9Y600 493 aa11.6□□□□□ -0.55
SCARNA16-201ENST00000515981 CTNND1O60716 968 aaKnown RBP11.59□□□□□ -0.55
SCARNA16-201ENST00000515981 PRDM1O75626 825 aa11.59□□□□□ -0.55
SCARNA16-201ENST00000515981 CAP2P40123 477 aa11.59□□□□□ -0.55
SCARNA16-201ENST00000515981 MFAP1P55081 439 aaKnown RBP11.59□□□□□ -0.55
SCARNA16-201ENST00000515981 PPARAQ07869 468 aa11.59□□□□□ -0.55
SCARNA16-201ENST00000515981 CERKLQ49MI3 558 aaPredicted RBP11.59□□□□□ -0.55
SCARNA16-201ENST00000515981 SPRYD7Q5W111 196 aa11.59□□□□□ -0.55
SCARNA16-201ENST00000515981 TATDN1Q6P1N9 297 aa11.59□□□□□ -0.55
SCARNA16-201ENST00000515981 AMOTL1Q8IY63 956 aa11.59□□□□□ -0.55
SCARNA16-201ENST00000515981 OPTNQ96CV9 577 aa11.59□□□□□ -0.55
SCARNA16-201ENST00000515981 OTUD5Q96G74 571 aa11.59□□□□□ -0.55
SCARNA16-201ENST00000515981 WNK4Q96J92 1243 aa11.59□□□□□ -0.55
SCARNA16-201ENST00000515981 ARPP21Q9UBL0 812 aaPredicted RBP11.59□□□□□ -0.55
SCARNA16-201ENST00000515981 WDR33Q9C0J8 1336 aaKnown RBP11.59□□□□□ -0.55
SCARNA16-201ENST00000515981 DDX60LQ5H9U9 1706 aaKnown RBP11.58□□□□□ -0.56
SCARNA16-201ENST00000515981 OTOFQ9HC10 1997 aa11.58□□□□□ -0.56
SCARNA16-201ENST00000515981 GH2P01242 217 aa11.58□□□□□ -0.56
SCARNA16-201ENST00000515981 SLC10A3P09131 477 aa11.58□□□□□ -0.56
SCARNA16-201ENST00000515981 AKR1B1P15121 316 aa11.58□□□□□ -0.56
SCARNA16-201ENST00000515981 KIF23Q02241 960 aaPredicted RBP11.58□□□□□ -0.56
SCARNA16-201ENST00000515981 NOL9Q5SY16 702 aaKnown RBP11.58□□□□□ -0.56
SCARNA16-201ENST00000515981 C16orf86Q6ZW13 317 aa11.58□□□□□ -0.56
SCARNA16-201ENST00000515981 SCYL3Q8IZE3 742 aa11.58□□□□□ -0.56
SCARNA16-201ENST00000515981 NKX2-3Q8TAU0 364 aa11.58□□□□□ -0.56
SCARNA16-201ENST00000515981 CCDC102AQ96A19 550 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms