RNA–Protein interactions for RNA: ENST00000515815.5

SDHA-219, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 704 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-219ENST00000515815 BCL11AQ9H165 835 aa14.66□□□□□ -0.06
SDHA-219ENST00000515815 HERC5Q9UII4 1024 aaKnown RBP14.66□□□□□ -0.06
SDHA-219ENST00000515815 NDUFB9Q9Y6M9 179 aa14.66□□□□□ -0.06
SDHA-219ENST00000515815 COL11A1P12107 1806 aaPredicted RBP14.65□□□□□ -0.06
SDHA-219ENST00000515815 TBC1D12O60347 775 aa14.65□□□□□ -0.06
SDHA-219ENST00000515815 TLR2O60603 784 aa14.65□□□□□ -0.06
SDHA-219ENST00000515815 CTNND1O60716 968 aaKnown RBP14.65□□□□□ -0.06
SDHA-219ENST00000515815 PTPRAP18433 802 aa14.65□□□□□ -0.06
SDHA-219ENST00000515815 CYP7A1P22680 504 aa14.65□□□□□ -0.06
SDHA-219ENST00000515815 TMED8Q6PL24 325 aaPredicted RBP14.65□□□□□ -0.06
SDHA-219ENST00000515815 SIRT2Q8IXJ6 389 aa14.65□□□□□ -0.06
SDHA-219ENST00000515815 TGFBRAP1Q8WUH2 860 aa14.65□□□□□ -0.06
SDHA-219ENST00000515815 DNAJC2Q99543 621 aaKnown RBP14.65□□□□□ -0.06
SDHA-219ENST00000515815 DHX36Q9H2U1 1008 aaKnown RBP14.65□□□□□ -0.06
SDHA-219ENST00000515815 A0A0G2JLL6 359 aaPredicted RBP14.64□□□□□ -0.07
SDHA-219ENST00000515815 PDHXO00330 501 aa14.64□□□□□ -0.07
SDHA-219ENST00000515815 HLA-DOAP06340 250 aa14.64□□□□□ -0.07
SDHA-219ENST00000515815 MLLT1Q03111 559 aaPredicted RBP14.64□□□□□ -0.07
SDHA-219ENST00000515815 KIF22Q14807 665 aa14.64□□□□□ -0.07
SDHA-219ENST00000515815 ARHGEF6Q15052 776 aa14.64□□□□□ -0.07
SDHA-219ENST00000515815 GADL1Q6ZQY3 521 aa14.64□□□□□ -0.07
SDHA-219ENST00000515815 PRRT2Q7Z6L0 340 aaPredicted RBP14.64□□□□□ -0.07
SDHA-219ENST00000515815 CRACR2BQ8N4Y2 399 aaPredicted RBP14.64□□□□□ -0.07
SDHA-219ENST00000515815 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.64□□□□□ -0.07
SDHA-219ENST00000515815 TBC1D2Q9BYX2 928 aa14.64□□□□□ -0.07
SDHA-219ENST00000515815 EFCC1Q9HA90 598 aa14.64□□□□□ -0.07
SDHA-219ENST00000515815 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.64□□□□□ -0.07
SDHA-219ENST00000515815 HTTP42858 3142 aa14.64□□□□□ -0.07
SDHA-219ENST00000515815 LAMA4Q16363 1823 aa14.64□□□□□ -0.07
SDHA-219ENST00000515815 ADGRA2Q96PE1 1338 aa14.64□□□□□ -0.07
SDHA-219ENST00000515815 TRIM75PA6NK02 468 aa14.63□□□□□ -0.07
SDHA-219ENST00000515815 SLURP2P0DP57 97 aa14.63□□□□□ -0.07
SDHA-219ENST00000515815 USP5P45974 858 aa14.63□□□□□ -0.07
SDHA-219ENST00000515815 PPP4CP60510 307 aa14.63□□□□□ -0.07
SDHA-219ENST00000515815 MAP3K10Q02779 954 aa14.63□□□□□ -0.07
SDHA-219ENST00000515815 MIGA1Q8NAN2 632 aa14.63□□□□□ -0.07
SDHA-219ENST00000515815 LRRCC1Q9C099 1032 aa14.63□□□□□ -0.07
SDHA-219ENST00000515815 ANTXR1Q9H6X2 564 aa14.63□□□□□ -0.07
SDHA-219ENST00000515815 PI4KBQ9UBF8 816 aa14.63□□□□□ -0.07
SDHA-219ENST00000515815 ZHX2Q9Y6X8 837 aa14.63□□□□□ -0.07
SDHA-219ENST00000515815 GOLIM4O00461 696 aa14.62□□□□□ -0.07
SDHA-219ENST00000515815 CXCL11O14625 94 aa14.62□□□□□ -0.07
SDHA-219ENST00000515815 DYNLL1P63167 89 aaKnown RBP14.62□□□□□ -0.07
SDHA-219ENST00000515815 LACTBP83111 547 aaPredicted RBP14.62□□□□□ -0.07
SDHA-219ENST00000515815 FASTKD5Q7L8L6 764 aaKnown RBP14.62□□□□□ -0.07
SDHA-219ENST00000515815 AS3MTQ9HBK9 375 aa14.62□□□□□ -0.07
SDHA-219ENST00000515815 SAP30BPQ9UHR5 308 aaKnown RBP14.62□□□□□ -0.07
SDHA-219ENST00000515815 PTPN22Q9Y2R2 807 aa14.62□□□□□ -0.07
SDHA-219ENST00000515815 ZNF236Q9UL36 1845 aa14.62□□□□□ -0.07
SDHA-219ENST00000515815 DOCK3Q8IZD9 2030 aa14.61□□□□□ -0.07
SDHA-219ENST00000515815 CAP2P40123 477 aa14.61□□□□□ -0.07
SDHA-219ENST00000515815 RGS19P49795 217 aa14.61□□□□□ -0.07
SDHA-219ENST00000515815 RRP1P56182 461 aaKnown RBP14.61□□□□□ -0.07
SDHA-219ENST00000515815 MOGSQ13724 837 aa14.61□□□□□ -0.07
SDHA-219ENST00000515815 SLC4A8Q2Y0W8 1093 aa14.61□□□□□ -0.07
SDHA-219ENST00000515815 CCDC84Q86UT8 332 aaPredicted RBP14.61□□□□□ -0.07
SDHA-219ENST00000515815 SMCR8Q8TEV9 937 aaPredicted RBP14.61□□□□□ -0.07
SDHA-219ENST00000515815 YTHDC1Q96MU7 727 aaKnown RBP14.61□□□□□ -0.07
SDHA-219ENST00000515815 DNAJC18Q9H819 358 aa14.61□□□□□ -0.07
SDHA-219ENST00000515815 PNMA3Q9UL41 463 aa14.61□□□□□ -0.07
SDHA-219ENST00000515815 AFG3L2Q9Y4W6 797 aa14.61□□□□□ -0.07
SDHA-219ENST00000515815 PDE6AP16499 860 aa14.6□□□□□ -0.07
SDHA-219ENST00000515815 GPATCH3Q96I76 525 aa14.6□□□□□ -0.07
SDHA-219ENST00000515815 PAG1Q9NWQ8 432 aa14.6□□□□□ -0.07
SDHA-219ENST00000515815 CPA4Q9UI42 421 aa14.6□□□□□ -0.07
SDHA-219ENST00000515815 PALD1Q9ULE6 856 aa14.6□□□□□ -0.07
SDHA-219ENST00000515815 AGTPBP1Q9UPW5 1226 aa14.6□□□□□ -0.07
SDHA-219ENST00000515815 SLC45A1Q9Y2W3 748 aa14.6□□□□□ -0.07
SDHA-219ENST00000515815 RLFQ13129 1914 aa14.59□□□□□ -0.07
SDHA-219ENST00000515815 MAGEB6P1A0A0J9YX57 407 aa14.59□□□□□ -0.07
SDHA-219ENST00000515815 GNRH1P01148 92 aa14.59□□□□□ -0.07
SDHA-219ENST00000515815 ASNSP08243 561 aa14.59□□□□□ -0.07
SDHA-219ENST00000515815 SLC9C1Q4G0N8 1177 aa14.59□□□□□ -0.07
SDHA-219ENST00000515815 PROCA1Q8NCQ7 364 aaPredicted RBP14.59□□□□□ -0.07
SDHA-219ENST00000515815 ZNF280CQ8ND82 737 aa14.59□□□□□ -0.07
SDHA-219ENST00000515815 ARHGAP39Q9C0H5 1083 aa14.59□□□□□ -0.07
SDHA-219ENST00000515815 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.59□□□□□ -0.07
SDHA-219ENST00000515815 ZBTB21Q9ULJ3 1066 aa14.59□□□□□ -0.07
SDHA-219ENST00000515815 ZNF532Q9HCE3 1301 aa14.59□□□□□ -0.07
SDHA-219ENST00000515815 PLXNA1Q9UIW2 1896 aa14.59□□□□□ -0.07
SDHA-219ENST00000515815 USP17L5A8MUK1 530 aa14.58□□□□□ -0.08
SDHA-219ENST00000515815 TNRC18O15417 2968 aaPredicted RBP14.58□□□□□ -0.08
SDHA-219ENST00000515815 GDF11O95390 407 aa14.58□□□□□ -0.08
SDHA-219ENST00000515815 CYP2C8P10632 490 aa14.58□□□□□ -0.08
SDHA-219ENST00000515815 CAP1Q01518 475 aa14.58□□□□□ -0.08
SDHA-219ENST00000515815 SLC9C2Q5TAH2 1124 aa14.58□□□□□ -0.08
SDHA-219ENST00000515815 GPAT2Q6NUI2 795 aa14.58□□□□□ -0.08
SDHA-219ENST00000515815 RIOK1Q9BRS2 568 aaKnown RBP14.58□□□□□ -0.08
SDHA-219ENST00000515815 CRNKL1Q9BZJ0 848 aaKnown RBP14.58□□□□□ -0.08
SDHA-219ENST00000515815 EHD4Q9H223 541 aa14.58□□□□□ -0.08
SDHA-219ENST00000515815 PTCH2Q9Y6C5 1203 aa14.58□□□□□ -0.08
SDHA-219ENST00000515815 ECM2O94769 699 aaPredicted RBP14.57□□□□□ -0.08
SDHA-219ENST00000515815 ATP5JP18859 108 aa14.57□□□□□ -0.08
SDHA-219ENST00000515815 HMGCS2P54868 508 aa14.57□□□□□ -0.08
SDHA-219ENST00000515815 PRMT2P55345 433 aa14.57□□□□□ -0.08
SDHA-219ENST00000515815 PABPC4Q13310 644 aaKnown RBP eCLIP14.57□□□□□ -0.085e-16■■□□□ 14.4
SDHA-219ENST00000515815 MTMR2Q13614 643 aa14.57□□□□□ -0.08
SDHA-219ENST00000515815 C17orf99Q6UX52 265 aa14.57□□□□□ -0.08
SDHA-219ENST00000515815 ARMC5Q96C12 935 aa14.57□□□□□ -0.08
SDHA-219ENST00000515815 EDC3Q96F86 508 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms