RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 PABPC4Q13310 644 aaKnown RBP eCLIP17.02■□□□□ 0.32
SMAD1-216ENST00000515527 RAB30Q15771 203 aa17.02■□□□□ 0.32
SMAD1-216ENST00000515527 MFSD14CQ5VZR4 134 aa17.02■□□□□ 0.32
SMAD1-216ENST00000515527 APOBEC3HQ6NTF7 200 aaKnown RBP17.02■□□□□ 0.32
SMAD1-216ENST00000515527 CCAR1Q8IX12 1150 aaKnown RBP17.02■□□□□ 0.32
SMAD1-216ENST00000515527 APBA2Q99767 749 aa17.02■□□□□ 0.32
SMAD1-216ENST00000515527 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.02■□□□□ 0.32
SMAD1-216ENST00000515527 METTL22Q9BUU2 404 aaPredicted RBP17.02■□□□□ 0.32
SMAD1-216ENST00000515527 NKX2-4Q9H2Z4 354 aa17.02■□□□□ 0.32
SMAD1-216ENST00000515527 FERMT2Q96AC1 680 aa17.01■□□□□ 0.31
SMAD1-216ENST00000515527 PLEKHF1Q96S99 279 aa17.01■□□□□ 0.31
SMAD1-216ENST00000515527 ASCC2Q9H1I8 757 aaPredicted RBP17.01■□□□□ 0.31
SMAD1-216ENST00000515527 MORF4L1Q9UBU8 362 aa17.01■□□□□ 0.31
SMAD1-216ENST00000515527 HOXB7P09629 217 aa17■□□□□ 0.31
SMAD1-216ENST00000515527 ALADP13716 330 aa17■□□□□ 0.31
SMAD1-216ENST00000515527 CHAF1AQ13111 956 aaPredicted RBP17■□□□□ 0.31
SMAD1-216ENST00000515527 PROCA1Q8NCQ7 364 aaPredicted RBP17■□□□□ 0.31
SMAD1-216ENST00000515527 DOCK1Q14185 1865 aa16.99■□□□□ 0.31
SMAD1-216ENST00000515527 GBF1Q92538 1859 aa16.99■□□□□ 0.31
SMAD1-216ENST00000515527 ZNF318Q5VUA4 2279 aa16.99■□□□□ 0.31
SMAD1-216ENST00000515527 PHF20L1A8MW92 1017 aa16.99■□□□□ 0.31
SMAD1-216ENST00000515527 KIAA0355O15063 1070 aa16.99■□□□□ 0.31
SMAD1-216ENST00000515527 KRT37O76014 449 aa16.99■□□□□ 0.31
SMAD1-216ENST00000515527 MAPK4P31152 587 aa16.99■□□□□ 0.31
SMAD1-216ENST00000515527 HIBADHP31937 336 aaKnown RBP16.99■□□□□ 0.31
SMAD1-216ENST00000515527 ADCYAP1R1P41586 468 aa16.99■□□□□ 0.31
SMAD1-216ENST00000515527 GYG1P46976 350 aa16.99■□□□□ 0.31
SMAD1-216ENST00000515527 CCDC84Q86UT8 332 aaPredicted RBP16.99■□□□□ 0.31
SMAD1-216ENST00000515527 USP6NLQ92738 828 aa16.99■□□□□ 0.31
SMAD1-216ENST00000515527 SPINK5Q9NQ38 1064 aaPredicted RBP16.99■□□□□ 0.31
SMAD1-216ENST00000515527 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.99■□□□□ 0.31
SMAD1-216ENST00000515527 LAS1LQ9Y4W2 734 aaKnown RBP16.99■□□□□ 0.31
SMAD1-216ENST00000515527 LRRFIP2Q9Y608 721 aaKnown RBP16.99■□□□□ 0.31
SMAD1-216ENST00000515527 UBE3BQ7Z3V4 1068 aa16.98■□□□□ 0.31
SMAD1-216ENST00000515527 HLA-CQ95604 372 aa16.98■□□□□ 0.31
SMAD1-216ENST00000515527 CWC22Q9HCG8 908 aaKnown RBP16.98■□□□□ 0.31
SMAD1-216ENST00000515527 TMEM39AQ9NV64 488 aa16.98■□□□□ 0.31
SMAD1-216ENST00000515527 TRANK1O15050 2925 aa16.98■□□□□ 0.31
SMAD1-216ENST00000515527 UTYO14607 1347 aa16.97■□□□□ 0.31
SMAD1-216ENST00000515527 ANKRD18BA2A2Z9 1011 aa16.97■□□□□ 0.31
SMAD1-216ENST00000515527 GTPBP6O43824 516 aaPredicted RBP16.97■□□□□ 0.31
SMAD1-216ENST00000515527 GFRA3O60609 400 aa16.97■□□□□ 0.31
SMAD1-216ENST00000515527 PEX10O60683 326 aa16.97■□□□□ 0.31
SMAD1-216ENST00000515527 C1orf53Q5VUE5 145 aa16.97■□□□□ 0.31
SMAD1-216ENST00000515527 CCDC174Q6PII3 467 aa16.97■□□□□ 0.31
SMAD1-216ENST00000515527 GPR142Q7Z601 462 aa16.97■□□□□ 0.31
SMAD1-216ENST00000515527 GPRC5AQ8NFJ5 357 aa16.97■□□□□ 0.31
SMAD1-216ENST00000515527 LOC285556D6RIA3 1793 aa16.97■□□□□ 0.31
SMAD1-216ENST00000515527 DOCK2Q92608 1830 aa16.96■□□□□ 0.31
SMAD1-216ENST00000515527 SSTR3P32745 418 aaPredicted RBP16.96■□□□□ 0.31
SMAD1-216ENST00000515527 RIPK4P57078 832 aa16.96■□□□□ 0.31
SMAD1-216ENST00000515527 MORN1Q5T089 497 aa16.96■□□□□ 0.31
SMAD1-216ENST00000515527 ERMP1Q7Z2K6 904 aa16.96■□□□□ 0.31
SMAD1-216ENST00000515527 GJD3Q8N144 294 aa16.96■□□□□ 0.31
SMAD1-216ENST00000515527 TBC1D22AQ8WUA7 517 aa16.96■□□□□ 0.31
SMAD1-216ENST00000515527 MRIQ9BWK5 157 aa16.96■□□□□ 0.31
SMAD1-216ENST00000515527 IQSEC3Q9UPP2 1182 aaPredicted RBP16.96■□□□□ 0.31
SMAD1-216ENST00000515527 MAST3O60307 1309 aa16.96■□□□□ 0.3
SMAD1-216ENST00000515527 PQBP1O60828 265 aaKnown RBP16.95■□□□□ 0.3
SMAD1-216ENST00000515527 FRAT2O75474 233 aaPredicted RBP16.95■□□□□ 0.3
SMAD1-216ENST00000515527 DDX58O95786 925 aaKnown RBP16.95■□□□□ 0.3
SMAD1-216ENST00000515527 IGKV5-2P06315 115 aa16.95■□□□□ 0.3
SMAD1-216ENST00000515527 HMGCS2P54868 508 aa16.95■□□□□ 0.3
SMAD1-216ENST00000515527 IRX3P78415 501 aaPredicted RBP16.95■□□□□ 0.3
SMAD1-216ENST00000515527 NFIAQ12857 509 aa16.95■□□□□ 0.3
SMAD1-216ENST00000515527 TMEM240Q5SV17 173 aa16.95■□□□□ 0.3
SMAD1-216ENST00000515527 ANO1Q5XXA6 986 aa16.95■□□□□ 0.3
SMAD1-216ENST00000515527 PLEKHH3Q7Z736 793 aa16.95■□□□□ 0.3
SMAD1-216ENST00000515527 EDC3Q96F86 508 aaKnown RBP16.95■□□□□ 0.3
SMAD1-216ENST00000515527 FLRT1Q9NZU1 646 aa16.95■□□□□ 0.3
SMAD1-216ENST00000515527 MAP3K2Q9Y2U5 619 aa16.95■□□□□ 0.3
SMAD1-216ENST00000515527 ATP2B2Q01814 1243 aa16.94■□□□□ 0.3
SMAD1-216ENST00000515527 MAP2K5Q13163 448 aa16.94■□□□□ 0.3
SMAD1-216ENST00000515527 DUSP27Q5VZP5 1158 aa16.94■□□□□ 0.3
SMAD1-216ENST00000515527 PPP2R2DQ66LE6 453 aa16.94■□□□□ 0.3
SMAD1-216ENST00000515527 SLC44A5Q8NCS7 719 aa16.94■□□□□ 0.3
SMAD1-216ENST00000515527 ANKS1AQ92625 1134 aa16.94■□□□□ 0.3
SMAD1-216ENST00000515527 YBX2Q9Y2T7 364 aaKnown RBP16.94■□□□□ 0.3
SMAD1-216ENST00000515527 MTCH2Q9Y6C9 303 aa16.94■□□□□ 0.3
SMAD1-216ENST00000515527 PTPRZ1P23471 2315 aaPredicted RBP16.94■□□□□ 0.3
SMAD1-216ENST00000515527 ZFHX2Q9C0A1 2572 aaPredicted RBP16.94■□□□□ 0.3
SMAD1-216ENST00000515527 A0A0G2JMZ2 1700 aa16.93■□□□□ 0.3
SMAD1-216ENST00000515527 CHL1O00533 1208 aa16.93■□□□□ 0.3
SMAD1-216ENST00000515527 CTNND1O60716 968 aaKnown RBP16.93■□□□□ 0.3
SMAD1-216ENST00000515527 PPP2R1AP30153 589 aa16.93■□□□□ 0.3
SMAD1-216ENST00000515527 SPP2Q13103 211 aa16.93■□□□□ 0.3
SMAD1-216ENST00000515527 PPIGQ13427 754 aaKnown RBP eCLIP16.93■□□□□ 0.3
SMAD1-216ENST00000515527 RASIP1Q5U651 963 aa16.93■□□□□ 0.3
SMAD1-216ENST00000515527 HHIPL2Q6UWX4 724 aa16.93■□□□□ 0.3
SMAD1-216ENST00000515527 VPS37DQ86XT2 251 aa16.93■□□□□ 0.3
SMAD1-216ENST00000515527 FAM84BQ96KN1 310 aaPredicted RBP16.93■□□□□ 0.3
SMAD1-216ENST00000515527 PORCNQ9H237 461 aa16.93■□□□□ 0.3
SMAD1-216ENST00000515527 TXNRD2Q9NNW7 524 aa16.93■□□□□ 0.3
SMAD1-216ENST00000515527 BAHCC1Q9P281 2608 aa16.93■□□□□ 0.3
SMAD1-216ENST00000515527 CSF1RP07333 972 aa16.92■□□□□ 0.3
SMAD1-216ENST00000515527 CYP2C19P33261 490 aa16.92■□□□□ 0.3
SMAD1-216ENST00000515527 NEXNQ0ZGT2 675 aa16.92■□□□□ 0.3
SMAD1-216ENST00000515527 CWF19L2Q2TBE0 894 aaKnown RBP16.92■□□□□ 0.3
SMAD1-216ENST00000515527 TRPV1Q8NER1 839 aa16.92■□□□□ 0.3
SMAD1-216ENST00000515527 PNNQ9H307 717 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms