RNA–Protein interactions for RNA: ENST00000513997.1

DDX60-205, Transcript of DExD/H-box helicase 60, humanhuman

TSL 3

Gene DDX60, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-205ENST00000513997 RUSC1Q9BVN2 902 aa10.77□□□□□ -0.69
DDX60-205ENST00000513997 ZCCHC2Q9C0B9 1178 aaKnown RBP10.77□□□□□ -0.69
DDX60-205ENST00000513997 TMX4Q9H1E5 349 aaPredicted RBP10.77□□□□□ -0.69
DDX60-205ENST00000513997 PPCSQ9HAB8 311 aa10.77□□□□□ -0.69
DDX60-205ENST00000513997 AASDHPPTQ9NRN7 309 aa10.77□□□□□ -0.69
DDX60-205ENST00000513997 TAGLN3Q9UI15 199 aa10.77□□□□□ -0.69
DDX60-205ENST00000513997 NOB1Q9ULX3 412 aaKnown RBP10.77□□□□□ -0.69
DDX60-205ENST00000513997 DNAJC25-GNG10A0A024R161 153 aa10.76□□□□□ -0.69
DDX60-205ENST00000513997 A0A1W2PQH9 124 aa10.76□□□□□ -0.69
DDX60-205ENST00000513997 NPHP1O15259 732 aa10.76□□□□□ -0.69
DDX60-205ENST00000513997 ACBD5Q5T8D3 534 aaPredicted RBP10.76□□□□□ -0.69
DDX60-205ENST00000513997 SAMD5Q5TGI4 173 aa10.76□□□□□ -0.69
DDX60-205ENST00000513997 HGSNATQ68CP4 663 aa10.76□□□□□ -0.69
DDX60-205ENST00000513997 BTLAQ7Z6A9 289 aa10.76□□□□□ -0.69
DDX60-205ENST00000513997 PASD1Q8IV76 773 aa10.76□□□□□ -0.69
DDX60-205ENST00000513997 SPICE1Q8N0Z3 855 aa10.76□□□□□ -0.69
DDX60-205ENST00000513997 MAGEB6Q8N7X4 407 aa10.76□□□□□ -0.69
DDX60-205ENST00000513997 CHMP4CQ96CF2 233 aa10.76□□□□□ -0.69
DDX60-205ENST00000513997 MTMR8Q96EF0 704 aa10.76□□□□□ -0.69
DDX60-205ENST00000513997 ZNF837Q96EG3 531 aaPredicted RBP10.76□□□□□ -0.69
DDX60-205ENST00000513997 LIN7BQ9HAP6 207 aa10.76□□□□□ -0.69
DDX60-205ENST00000513997 NCOA5Q9HCD5 579 aaKnown RBP10.76□□□□□ -0.69
DDX60-205ENST00000513997 JADE2Q9NQC1 790 aa10.76□□□□□ -0.69
DDX60-205ENST00000513997 SLC5A4Q9NY91 659 aa10.76□□□□□ -0.69
DDX60-205ENST00000513997 NXF1Q9UBU9 619 aaKnown RBP10.76□□□□□ -0.69
DDX60-205ENST00000513997 UPK3BL1B0FP48 263 aa10.75□□□□□ -0.69
DDX60-205ENST00000513997 UPK3BL2E5RIL1 263 aa10.75□□□□□ -0.69
DDX60-205ENST00000513997 PLD2O14939 933 aa10.75□□□□□ -0.69
DDX60-205ENST00000513997 MAN1A1P33908 653 aa10.75□□□□□ -0.69
DDX60-205ENST00000513997 PURAQ00577 322 aaKnown RBP10.75□□□□□ -0.69
DDX60-205ENST00000513997 ITKQ08881 620 aa10.75□□□□□ -0.69
DDX60-205ENST00000513997 MAPRE1Q15691 268 aaKnown RBP10.75□□□□□ -0.69
DDX60-205ENST00000513997 FNDC3BQ53EP0 1204 aaKnown RBP10.75□□□□□ -0.69
DDX60-205ENST00000513997 DDX46Q7L014 1031 aaKnown RBP10.75□□□□□ -0.69
DDX60-205ENST00000513997 REC114Q7Z4M0 266 aa10.75□□□□□ -0.69
DDX60-205ENST00000513997 PAF1Q8N7H5 531 aa10.75□□□□□ -0.69
DDX60-205ENST00000513997 NECAB3Q96P71 396 aaPredicted RBP10.75□□□□□ -0.69
DDX60-205ENST00000513997 TCF12Q99081 682 aa10.75□□□□□ -0.69
DDX60-205ENST00000513997 MRPS23Q9Y3D9 190 aaKnown RBP10.75□□□□□ -0.69
DDX60-205ENST00000513997 PRPF3O43395 683 aaKnown RBP10.74□□□□□ -0.69
DDX60-205ENST00000513997 RAPGEF3O95398 923 aa10.74□□□□□ -0.69
DDX60-205ENST00000513997 F2P00734 622 aa10.74□□□□□ -0.69
DDX60-205ENST00000513997 HSP90AA1P07900 732 aaKnown RBP10.74□□□□□ -0.69
DDX60-205ENST00000513997 FIGNL1Q6PIW4 674 aa10.74□□□□□ -0.69
DDX60-205ENST00000513997 RUFY4Q6ZNE9 571 aa10.74□□□□□ -0.69
DDX60-205ENST00000513997 CEP63Q96MT8 703 aa10.74□□□□□ -0.69
DDX60-205ENST00000513997 PTPRHQ9HD43 1115 aa10.74□□□□□ -0.69
DDX60-205ENST00000513997 SALL4Q9UJQ4 1053 aa10.74□□□□□ -0.69
DDX60-205ENST00000513997 PCDHGC4Q9Y5F7 938 aa10.74□□□□□ -0.69
DDX60-205ENST00000513997 XYLBO75191 536 aa10.73□□□□□ -0.69
DDX60-205ENST00000513997 CILPO75339 1184 aa10.73□□□□□ -0.69
DDX60-205ENST00000513997 IFIT2P09913 472 aaKnown RBP10.73□□□□□ -0.69
DDX60-205ENST00000513997 COL6A1P12109 1028 aa10.73□□□□□ -0.69
DDX60-205ENST00000513997 TYRO3Q06418 890 aa10.73□□□□□ -0.69
DDX60-205ENST00000513997 TTC6Q86TZ1 520 aa10.73□□□□□ -0.69
DDX60-205ENST00000513997 ZBTB46Q86UZ6 589 aa10.73□□□□□ -0.69
DDX60-205ENST00000513997 LRRTM3Q86VH5 581 aa10.73□□□□□ -0.69
DDX60-205ENST00000513997 NLRP13Q86W25 1043 aa10.73□□□□□ -0.69
DDX60-205ENST00000513997 LRRC47Q8N1G4 583 aaKnown RBP10.73□□□□□ -0.69
DDX60-205ENST00000513997 VWA5B2Q8N398 1253 aa10.73□□□□□ -0.69
DDX60-205ENST00000513997 MYRIPQ8NFW9 859 aa10.73□□□□□ -0.69
DDX60-205ENST00000513997 WDR66Q8TBY9 1149 aa10.73□□□□□ -0.69
DDX60-205ENST00000513997 NANOS1Q8WY41 292 aaKnown RBP10.73□□□□□ -0.69
DDX60-205ENST00000513997 JARID2Q92833 1246 aaPredicted RBP10.73□□□□□ -0.69
DDX60-205ENST00000513997 YIPF4Q9BSR8 244 aa10.73□□□□□ -0.69
DDX60-205ENST00000513997 MIR1-1HGQ9H1L0 117 aa10.73□□□□□ -0.69
DDX60-205ENST00000513997 ZNF180Q9UJW8 692 aa10.73□□□□□ -0.69
DDX60-205ENST00000513997 LZTS1Q9Y250 596 aa10.73□□□□□ -0.69
DDX60-205ENST00000513997 PCDHB5Q9Y5E4 795 aa10.73□□□□□ -0.69
DDX60-205ENST00000513997 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.73□□□□□ -0.69
DDX60-205ENST00000513997 SCINQ9Y6U3 715 aa10.73□□□□□ -0.69
DDX60-205ENST00000513997 CFAP69A5D8W1 941 aa10.72□□□□□ -0.69
DDX60-205ENST00000513997 ATXN7O15265 892 aaPredicted RBP10.72□□□□□ -0.69
DDX60-205ENST00000513997 PAGE1O75459 146 aa10.72□□□□□ -0.69
DDX60-205ENST00000513997 RFPL1O75677 317 aa10.72□□□□□ -0.69
DDX60-205ENST00000513997 GRNP28799 593 aaKnown RBP10.72□□□□□ -0.69
DDX60-205ENST00000513997 RNF219Q5W0B1 726 aaPredicted RBP10.72□□□□□ -0.69
DDX60-205ENST00000513997 CNNM4Q6P4Q7 775 aa10.72□□□□□ -0.69
DDX60-205ENST00000513997 NPAS3Q8IXF0 933 aa10.72□□□□□ -0.69
DDX60-205ENST00000513997 KISS1RQ969F8 398 aaPredicted RBP10.72□□□□□ -0.69
DDX60-205ENST00000513997 GTPBP3Q969Y2 492 aaKnown RBP10.72□□□□□ -0.69
DDX60-205ENST00000513997 CLUHP3Q96NS8 147 aa10.72□□□□□ -0.69
DDX60-205ENST00000513997 CCDC8Q9H0W5 538 aaPredicted RBP10.72□□□□□ -0.69
DDX60-205ENST00000513997 EHMT1Q9H9B1 1298 aa10.72□□□□□ -0.69
DDX60-205ENST00000513997 NDFIP2Q9NV92 336 aa10.72□□□□□ -0.69
DDX60-205ENST00000513997 BNIP3LO60238 219 aa10.71□□□□□ -0.69
DDX60-205ENST00000513997 EGFRP00533 1210 aa10.71□□□□□ -0.69
DDX60-205ENST00000513997 FAM157BP0CG42 384 aa10.71□□□□□ -0.69
DDX60-205ENST00000513997 TRIM27P14373 513 aa10.71□□□□□ -0.69
DDX60-205ENST00000513997 CCNFP41002 786 aa10.71□□□□□ -0.69
DDX60-205ENST00000513997 EFCAB2Q5VUJ9 269 aa10.71□□□□□ -0.69
DDX60-205ENST00000513997 LHFPL2Q6ZUX7 228 aa10.71□□□□□ -0.69
DDX60-205ENST00000513997 PODNQ7Z5L7 613 aa10.71□□□□□ -0.69
DDX60-205ENST00000513997 CCNJLQ8IV13 435 aa10.71□□□□□ -0.69
DDX60-205ENST00000513997 INTS7Q9NVH2 962 aaKnown RBP10.71□□□□□ -0.69
DDX60-205ENST00000513997 KANSL3Q9P2N6 904 aa10.71□□□□□ -0.69
DDX60-205ENST00000513997 CDC14CA4D256 554 aa10.7□□□□□ -0.7
DDX60-205ENST00000513997 IQCA1LA6NCM1 817 aa10.7□□□□□ -0.7
DDX60-205ENST00000513997 EFSO43281 561 aa10.7□□□□□ -0.7
DDX60-205ENST00000513997 CYP2E1P05181 493 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms