RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 SOCS4Q8WXH5 440 aa15.04■□□□□ -0
PTPN20-229ENST00000513756 FAM161BQ96MY7 647 aa15.04■□□□□ -0
PTPN20-229ENST00000513756 NUDT12Q9BQG2 462 aa15.04■□□□□ -0
PTPN20-229ENST00000513756 ASCC2Q9H1I8 757 aaPredicted RBP15.04■□□□□ -0
PTPN20-229ENST00000513756 DNAH12Q6ZR08 3092 aa15.04■□□□□ -0
PTPN20-229ENST00000513756 GAKO14976 1311 aa15.03■□□□□ -0
PTPN20-229ENST00000513756 ZKSCAN1P17029 563 aaPredicted RBP15.03■□□□□ -0
PTPN20-229ENST00000513756 HMGCS2P54868 508 aa15.03■□□□□ -0
PTPN20-229ENST00000513756 PICALMQ13492 652 aa15.03■□□□□ -0
PTPN20-229ENST00000513756 PDE3AQ14432 1141 aa15.03■□□□□ -0
PTPN20-229ENST00000513756 LRRC26Q2I0M4 334 aa15.03■□□□□ -0
PTPN20-229ENST00000513756 CCDC84Q86UT8 332 aaPredicted RBP15.03■□□□□ -0
PTPN20-229ENST00000513756 DZIP1Q86YF9 867 aaKnown RBP15.03■□□□□ -0
PTPN20-229ENST00000513756 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.03■□□□□ -0
PTPN20-229ENST00000513756 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.03■□□□□ -0
PTPN20-229ENST00000513756 MORF4L1Q9UBU8 362 aa15.03■□□□□ -0
PTPN20-229ENST00000513756 MYH2Q9UKX2 1941 aa15.03■□□□□ -0
PTPN20-229ENST00000513756 COL2A1P02458 1487 aaPredicted RBP15.02■□□□□ -0
PTPN20-229ENST00000513756 RFX7Q2KHR2 1363 aa15.02■□□□□ -0
PTPN20-229ENST00000513756 IRX3P78415 501 aaPredicted RBP15.02■□□□□ -0
PTPN20-229ENST00000513756 ATP2B3Q16720 1220 aa15.02■□□□□ -0
PTPN20-229ENST00000513756 FAM163AQ96GL9 167 aaPredicted RBP15.02■□□□□ -0
PTPN20-229ENST00000513756 AS3MTQ9HBK9 375 aa15.02■□□□□ -0
PTPN20-229ENST00000513756 DDX4Q9NQI0 724 aaKnown RBP15.02■□□□□ -0
PTPN20-229ENST00000513756 EYSQ5T1H1 3165 aa15.02□□□□□ -0.01
PTPN20-229ENST00000513756 LOC285556D6RIA3 1793 aa15.01□□□□□ -0.01
PTPN20-229ENST00000513756 USP17L5A8MUK1 530 aa15.01□□□□□ -0.01
PTPN20-229ENST00000513756 CACNB2Q08289 660 aaPredicted RBP15.01□□□□□ -0.01
PTPN20-229ENST00000513756 SH3D19Q5HYK7 790 aa15.01□□□□□ -0.01
PTPN20-229ENST00000513756 SPTY2D1Q68D10 685 aaPredicted RBP15.01□□□□□ -0.01
PTPN20-229ENST00000513756 CCAR1Q8IX12 1150 aaKnown RBP15.01□□□□□ -0.01
PTPN20-229ENST00000513756 GPRC5AQ8NFJ5 357 aa15.01□□□□□ -0.01
PTPN20-229ENST00000513756 SYMPKQ92797 1274 aaKnown RBP15.01□□□□□ -0.01
PTPN20-229ENST00000513756 CEP126Q9P2H0 1117 aa15.01□□□□□ -0.01
PTPN20-229ENST00000513756 PRKAG2Q9UGJ0 569 aa15.01□□□□□ -0.01
PTPN20-229ENST00000513756 FBXO3Q9UK99 471 aa15.01□□□□□ -0.01
PTPN20-229ENST00000513756 ZBTB22O15209 634 aa15□□□□□ -0.01
PTPN20-229ENST00000513756 NPM3O75607 178 aaKnown RBP15□□□□□ -0.01
PTPN20-229ENST00000513756 SLURP2P0DP57 97 aa15□□□□□ -0.01
PTPN20-229ENST00000513756 MAPK4P31152 587 aa15□□□□□ -0.01
PTPN20-229ENST00000513756 RGS2P41220 211 aa15□□□□□ -0.01
PTPN20-229ENST00000513756 BTDP43251 543 aa15□□□□□ -0.01
PTPN20-229ENST00000513756 LHX8Q68G74 356 aa15□□□□□ -0.01
PTPN20-229ENST00000513756 MAFAQ8NHW3 353 aaPredicted RBP15□□□□□ -0.01
PTPN20-229ENST00000513756 CDX2Q99626 313 aaPredicted RBP15□□□□□ -0.01
PTPN20-229ENST00000513756 SALL2Q9Y467 1007 aaPredicted RBP15□□□□□ -0.01
PTPN20-229ENST00000513756 PLXNB2O15031 1838 aa15□□□□□ -0.01
PTPN20-229ENST00000513756 PRUNE2Q8WUY3 3088 aa14.99□□□□□ -0.01
PTPN20-229ENST00000513756 MAP4K4O95819 1239 aaPredicted RBP14.99□□□□□ -0.01
PTPN20-229ENST00000513756 CAP2P40123 477 aa14.99□□□□□ -0.01
PTPN20-229ENST00000513756 RFX5P48382 616 aaPredicted RBP14.99□□□□□ -0.01
PTPN20-229ENST00000513756 ATG9AQ7Z3C6 839 aa14.99□□□□□ -0.01
PTPN20-229ENST00000513756 TMOD4Q9NZQ9 345 aa14.99□□□□□ -0.01
PTPN20-229ENST00000513756 ABCF2Q9UG63 623 aa14.99□□□□□ -0.01
PTPN20-229ENST00000513756 MROH7-TTC4A0A0A0MT08 1334 aa14.98□□□□□ -0.01
PTPN20-229ENST00000513756 CIAO1O76071 339 aa14.98□□□□□ -0.01
PTPN20-229ENST00000513756 CCND3P30281 292 aaPredicted RBP14.98□□□□□ -0.01
PTPN20-229ENST00000513756 HOXA7P31268 230 aaPredicted RBP14.98□□□□□ -0.01
PTPN20-229ENST00000513756 PHKA1P46020 1223 aa14.98□□□□□ -0.01
PTPN20-229ENST00000513756 GTF3C2Q8WUA4 911 aaPredicted RBP14.98□□□□□ -0.01
PTPN20-229ENST00000513756 SENP6Q9GZR1 1112 aaPredicted RBP14.98□□□□□ -0.01
PTPN20-229ENST00000513756 USP44Q9H0E7 712 aa14.98□□□□□ -0.01
PTPN20-229ENST00000513756 SEMA6BQ9H3T3 888 aa14.98□□□□□ -0.01
PTPN20-229ENST00000513756 PDS5AQ29RF7 1337 aaKnown RBP14.97□□□□□ -0.01
PTPN20-229ENST00000513756 GPR75-ASB3A0A0A6YYF3 556 aa14.97□□□□□ -0.01
PTPN20-229ENST00000513756 USP6NLQ92738 828 aa14.97□□□□□ -0.01
PTPN20-229ENST00000513756 P2RX7Q99572 595 aaKnown RBP14.97□□□□□ -0.01
PTPN20-229ENST00000513756 APBA2Q99767 749 aa14.97□□□□□ -0.01
PTPN20-229ENST00000513756 WDR18Q9BV38 432 aa14.97□□□□□ -0.01
PTPN20-229ENST00000513756 CWC22Q9HCG8 908 aaKnown RBP14.97□□□□□ -0.01
PTPN20-229ENST00000513756 HERC5Q9UII4 1024 aaKnown RBP14.97□□□□□ -0.01
PTPN20-229ENST00000513756 PTPRCP08575 1304 aa14.96□□□□□ -0.01
PTPN20-229ENST00000513756 FAM196BA6NMK8 535 aa14.96□□□□□ -0.01
PTPN20-229ENST00000513756 MSCO60682 206 aa14.96□□□□□ -0.01
PTPN20-229ENST00000513756 BACE1P56817 501 aa14.96□□□□□ -0.01
PTPN20-229ENST00000513756 HERVK_113P62684 666 aa14.96□□□□□ -0.01
PTPN20-229ENST00000513756 MORN1Q5T089 497 aa14.96□□□□□ -0.01
PTPN20-229ENST00000513756 CCDC102BQ68D86 513 aa14.96□□□□□ -0.01
PTPN20-229ENST00000513756 ERICH6Q7L0X2 663 aa14.96□□□□□ -0.01
PTPN20-229ENST00000513756 PLEKHH3Q7Z736 793 aa14.96□□□□□ -0.01
PTPN20-229ENST00000513756 SIL1Q9H173 461 aa14.96□□□□□ -0.01
PTPN20-229ENST00000513756 ATAD5Q96QE3 1844 aa14.95□□□□□ -0.02
PTPN20-229ENST00000513756 C19orf81C9J6K1 198 aa14.95□□□□□ -0.02
PTPN20-229ENST00000513756 GLRX3O76003 335 aaKnown RBP14.95□□□□□ -0.02
PTPN20-229ENST00000513756 LDHCP07864 332 aa14.95□□□□□ -0.02
PTPN20-229ENST00000513756 IL15P40933 162 aaPredicted RBP14.95□□□□□ -0.02
PTPN20-229ENST00000513756 RHBDL3P58872 404 aa14.95□□□□□ -0.02
PTPN20-229ENST00000513756 ERVK-9P63128 1117 aa14.95□□□□□ -0.02
PTPN20-229ENST00000513756 ERVK-24P63145 666 aa14.95□□□□□ -0.02
PTPN20-229ENST00000513756 GSTO1P78417 241 aa14.95□□□□□ -0.02
PTPN20-229ENST00000513756 MTMR2Q13614 643 aa14.95□□□□□ -0.02
PTPN20-229ENST00000513756 MFSD14CQ5VZR4 134 aa14.95□□□□□ -0.02
PTPN20-229ENST00000513756 GPR142Q7Z601 462 aa14.95□□□□□ -0.02
PTPN20-229ENST00000513756 TXNRD2Q9NNW7 524 aa14.95□□□□□ -0.02
PTPN20-229ENST00000513756 ASNSP08243 561 aa14.94□□□□□ -0.02
PTPN20-229ENST00000513756 FOSL2P15408 326 aa14.94□□□□□ -0.02
PTPN20-229ENST00000513756 SMAD3P84022 425 aaKnown RBP14.94□□□□□ -0.02
PTPN20-229ENST00000513756 MECOMQ03112 1051 aa14.94□□□□□ -0.02
PTPN20-229ENST00000513756 RASGRF1Q13972 1273 aa14.94□□□□□ -0.02
PTPN20-229ENST00000513756 CCL14Q16627 93 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms