RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 TRIM22Q8IYM9 498 aa8.62□□□□□ -1.03
HMGN1P17-201ENST00000513734 ALKBH8Q96BT7 664 aaKnown RBP8.62□□□□□ -1.03
HMGN1P17-201ENST00000513734 MRC1P22897 1456 aa8.62□□□□□ -1.03
HMGN1P17-201ENST00000513734 XYLBO75191 536 aa8.61□□□□□ -1.03
HMGN1P17-201ENST00000513734 HMOX1P09601 288 aa8.61□□□□□ -1.03
HMGN1P17-201ENST00000513734 ITGA6P23229 1130 aa8.61□□□□□ -1.03
HMGN1P17-201ENST00000513734 ZNF438Q7Z4V0 828 aa8.61□□□□□ -1.03
HMGN1P17-201ENST00000513734 SLC16A10Q8TF71 515 aa8.61□□□□□ -1.03
HMGN1P17-201ENST00000513734 SMARCC1Q92922 1105 aaPredicted RBP8.61□□□□□ -1.03
HMGN1P17-201ENST00000513734 KCNH4Q9UQ05 1017 aa8.61□□□□□ -1.03
HMGN1P17-201ENST00000513734 KCPQ6ZWJ8 1503 aa8.6□□□□□ -1.03
HMGN1P17-201ENST00000513734 E9PSI1 815 aa8.6□□□□□ -1.03
HMGN1P17-201ENST00000513734 LCE2BO14633 110 aa8.6□□□□□ -1.03
HMGN1P17-201ENST00000513734 FAM157BP0CG42 384 aa8.6□□□□□ -1.03
HMGN1P17-201ENST00000513734 YBX3P16989 372 aaKnown RBP eCLIP8.6□□□□□ -1.03
HMGN1P17-201ENST00000513734 SFSWAPQ12872 951 aaKnown RBP8.6□□□□□ -1.03
HMGN1P17-201ENST00000513734 UBAP2LQ14157 1087 aaKnown RBP8.6□□□□□ -1.03
HMGN1P17-201ENST00000513734 WWC3Q9ULE0 1092 aa8.6□□□□□ -1.03
HMGN1P17-201ENST00000513734 PLEKHG2Q9H7P9 1386 aa8.6□□□□□ -1.03
HMGN1P17-201ENST00000513734 LDHBP07195 334 aaKnown RBP8.59□□□□□ -1.03
HMGN1P17-201ENST00000513734 POLD1P28340 1107 aa8.59□□□□□ -1.03
HMGN1P17-201ENST00000513734 TNP2Q05952 138 aa8.59□□□□□ -1.03
HMGN1P17-201ENST00000513734 ORC1Q13415 861 aa8.59□□□□□ -1.03
HMGN1P17-201ENST00000513734 PLEKHO1Q53GL0 409 aaPredicted RBP8.59□□□□□ -1.03
HMGN1P17-201ENST00000513734 GTPBP3Q969Y2 492 aaKnown RBP8.59□□□□□ -1.03
HMGN1P17-201ENST00000513734 LGR6Q9HBX8 967 aa8.59□□□□□ -1.03
HMGN1P17-201ENST00000513734 CACNA1SQ13698 1873 aa8.59□□□□□ -1.03
HMGN1P17-201ENST00000513734 CCDC88AQ3V6T2 1871 aa8.58□□□□□ -1.04
HMGN1P17-201ENST00000513734 PNMA6FA0A0J9YX94 578 aa8.58□□□□□ -1.04
HMGN1P17-201ENST00000513734 ERVV-2B6SEH9 535 aa8.58□□□□□ -1.04
HMGN1P17-201ENST00000513734 EFSO43281 561 aa8.58□□□□□ -1.04
HMGN1P17-201ENST00000513734 BNIP3LO60238 219 aa8.58□□□□□ -1.04
HMGN1P17-201ENST00000513734 NEFLP07196 543 aa8.58□□□□□ -1.04
HMGN1P17-201ENST00000513734 MAPTP10636 758 aaKnown RBP8.58□□□□□ -1.04
HMGN1P17-201ENST00000513734 PDE12Q6L8Q7 609 aaKnown RBP8.58□□□□□ -1.04
HMGN1P17-201ENST00000513734 XKR5Q6UX68 686 aa8.58□□□□□ -1.04
HMGN1P17-201ENST00000513734 ZNF837Q96EG3 531 aaPredicted RBP8.58□□□□□ -1.04
HMGN1P17-201ENST00000513734 ABHD17AQ96GS6 310 aa8.58□□□□□ -1.04
HMGN1P17-201ENST00000513734 DCAF5Q96JK2 942 aa8.58□□□□□ -1.04
HMGN1P17-201ENST00000513734 ELP3Q9H9T3 547 aa8.58□□□□□ -1.04
HMGN1P17-201ENST00000513734 FOXD3Q9UJU5 478 aaPredicted RBP8.58□□□□□ -1.04
HMGN1P17-201ENST00000513734 ARFGEF1Q9Y6D6 1849 aa8.58□□□□□ -1.04
HMGN1P17-201ENST00000513734 POTECB2RU33 542 aa8.57□□□□□ -1.04
HMGN1P17-201ENST00000513734 EIF1AYO14602 144 aaKnown RBP8.57□□□□□ -1.04
HMGN1P17-201ENST00000513734 TNFRSF21O75509 655 aa8.57□□□□□ -1.04
HMGN1P17-201ENST00000513734 CABP4P57796 275 aa8.57□□□□□ -1.04
HMGN1P17-201ENST00000513734 ATP2B2Q01814 1243 aa8.57□□□□□ -1.04
HMGN1P17-201ENST00000513734 SLC39A6Q13433 755 aa8.57□□□□□ -1.04
HMGN1P17-201ENST00000513734 ENOX2Q16206 610 aaKnown RBP8.57□□□□□ -1.04
HMGN1P17-201ENST00000513734 GPR162Q16538 588 aa8.57□□□□□ -1.04
HMGN1P17-201ENST00000513734 MTHFSDQ2M296 383 aaKnown RBP8.57□□□□□ -1.04
HMGN1P17-201ENST00000513734 AMOTQ4VCS5 1084 aa8.57□□□□□ -1.04
HMGN1P17-201ENST00000513734 C1orf141Q5JVX7 400 aa8.57□□□□□ -1.04
HMGN1P17-201ENST00000513734 MRRFQ96E11 262 aaKnown RBP8.57□□□□□ -1.04
HMGN1P17-201ENST00000513734 GMCL1Q96IK5 515 aa8.57□□□□□ -1.04
HMGN1P17-201ENST00000513734 CSRNP1Q96S65 589 aa8.57□□□□□ -1.04
HMGN1P17-201ENST00000513734 SETDB2Q96T68 719 aa8.57□□□□□ -1.04
HMGN1P17-201ENST00000513734 TMEM63CQ9P1W3 806 aa8.57□□□□□ -1.04
HMGN1P17-201ENST00000513734 DLEC1Q9Y238 1755 aa8.57□□□□□ -1.04
HMGN1P17-201ENST00000513734 SBF1O95248 1867 aa8.57□□□□□ -1.04
HMGN1P17-201ENST00000513734 ANKRD31Q8N7Z5 1873 aa8.57□□□□□ -1.04
HMGN1P17-201ENST00000513734 NPC1L1Q9UHC9 1359 aa8.57□□□□□ -1.04
HMGN1P17-201ENST00000513734 CDC14CA4D256 554 aa8.56□□□□□ -1.04
HMGN1P17-201ENST00000513734 RNMTO43148 476 aaKnown RBP8.56□□□□□ -1.04
HMGN1P17-201ENST00000513734 PPFIA3O75145 1194 aa8.56□□□□□ -1.04
HMGN1P17-201ENST00000513734 SASH3O75995 380 aa8.56□□□□□ -1.04
HMGN1P17-201ENST00000513734 EGFRP00533 1210 aa8.56□□□□□ -1.04
HMGN1P17-201ENST00000513734 GRIN2CQ14957 1233 aa8.56□□□□□ -1.04
HMGN1P17-201ENST00000513734 KRT25Q7Z3Z0 450 aa8.56□□□□□ -1.04
HMGN1P17-201ENST00000513734 SNX29Q8TEQ0 813 aa8.56□□□□□ -1.04
HMGN1P17-201ENST00000513734 C11orf16Q9NQ32 467 aa8.56□□□□□ -1.04
HMGN1P17-201ENST00000513734 NDFIP2Q9NV92 336 aa8.56□□□□□ -1.04
HMGN1P17-201ENST00000513734 MARK1Q9P0L2 795 aa8.56□□□□□ -1.04
HMGN1P17-201ENST00000513734 NRXN2Q9P2S2 1712 aa8.56□□□□□ -1.04
HMGN1P17-201ENST00000513734 PXDNLA1KZ92 1463 aa8.56□□□□□ -1.04
HMGN1P17-201ENST00000513734 SCN7AQ01118 1682 aa8.56□□□□□ -1.04
HMGN1P17-201ENST00000513734 BCORQ6W2J9 1755 aa8.56□□□□□ -1.04
HMGN1P17-201ENST00000513734 CNTNAP4Q9C0A0 1308 aa8.55□□□□□ -1.04
HMGN1P17-201ENST00000513734 DIAPH1O60610 1272 aaKnown RBP8.55□□□□□ -1.04
HMGN1P17-201ENST00000513734 CPNE3O75131 537 aaKnown RBP8.55□□□□□ -1.04
HMGN1P17-201ENST00000513734 PHACTR2O75167 634 aa8.55□□□□□ -1.04
HMGN1P17-201ENST00000513734 PRPF40AO75400 957 aaKnown RBP8.55□□□□□ -1.04
HMGN1P17-201ENST00000513734 HSP90AB1P08238 724 aaKnown RBP8.55□□□□□ -1.04
HMGN1P17-201ENST00000513734 CD33P20138 364 aa8.55□□□□□ -1.04
HMGN1P17-201ENST00000513734 CRKLP46109 303 aaKnown RBP8.55□□□□□ -1.04
HMGN1P17-201ENST00000513734 LAMC2Q13753 1193 aa8.55□□□□□ -1.04
HMGN1P17-201ENST00000513734 CCINQ13939 588 aa8.55□□□□□ -1.04
HMGN1P17-201ENST00000513734 AKAP4Q5JQC9 854 aa8.55□□□□□ -1.04
HMGN1P17-201ENST00000513734 VWA5B2Q8N398 1253 aa8.55□□□□□ -1.04
HMGN1P17-201ENST00000513734 DUSP9Q99956 384 aaKnown RBP8.55□□□□□ -1.04
HMGN1P17-201ENST00000513734 GSX2Q9BZM3 304 aa8.55□□□□□ -1.04
HMGN1P17-201ENST00000513734 SLC52A2Q9HAB3 445 aa8.55□□□□□ -1.04
HMGN1P17-201ENST00000513734 KIAA1522Q9P206 1035 aaPredicted RBP8.55□□□□□ -1.04
HMGN1P17-201ENST00000513734 SRP68Q9UHB9 627 aaKnown RBP8.55□□□□□ -1.04
HMGN1P17-201ENST00000513734 HCN2Q9UL51 889 aa8.55□□□□□ -1.04
HMGN1P17-201ENST00000513734 COL11A2P13942 1736 aaPredicted RBP8.54□□□□□ -1.04
HMGN1P17-201ENST00000513734 CEP350Q5VT06 3117 aa8.54□□□□□ -1.04
HMGN1P17-201ENST00000513734 GPR25O00155 361 aa8.54□□□□□ -1.04
HMGN1P17-201ENST00000513734 U2SURPO15042 1029 aaKnown RBP8.54□□□□□ -1.04
HMGN1P17-201ENST00000513734 MMP10P09238 476 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms