RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 ZNF112Q9UJU3 913 aa12.1□□□□□ -0.47
CCL28-203ENST00000513525 HPS5Q9UPZ3 1129 aa12.1□□□□□ -0.47
CCL28-203ENST00000513525 RBM19Q9Y4C8 960 aaKnown RBP12.1□□□□□ -0.47
CCL28-203ENST00000513525 ATRNL1Q5VV63 1379 aa12.09□□□□□ -0.47
CCL28-203ENST00000513525 MROH7-TTC4A0A0A0MT08 1334 aa12.09□□□□□ -0.47
CCL28-203ENST00000513525 CCL15-CCL14A0A0B4J2E2 113 aa12.09□□□□□ -0.47
CCL28-203ENST00000513525 ENTPD3O75355 529 aa12.09□□□□□ -0.47
CCL28-203ENST00000513525 ATP8B2P98198 1209 aa12.09□□□□□ -0.47
CCL28-203ENST00000513525 TCP10Q12799 353 aa12.09□□□□□ -0.47
CCL28-203ENST00000513525 PPIL2Q13356 520 aa12.09□□□□□ -0.47
CCL28-203ENST00000513525 CCL15Q16663 113 aa12.09□□□□□ -0.47
CCL28-203ENST00000513525 CENPQQ7L2Z9 268 aaPredicted RBP12.09□□□□□ -0.47
CCL28-203ENST00000513525 DZIP1Q86YF9 867 aaKnown RBP12.09□□□□□ -0.47
CCL28-203ENST00000513525 ZKSCAN4Q969J2 545 aaPredicted RBP12.09□□□□□ -0.47
CCL28-203ENST00000513525 ZCCHC17Q9NP64 241 aaKnown RBP12.09□□□□□ -0.47
CCL28-203ENST00000513525 HMG20BQ9P0W2 317 aa12.09□□□□□ -0.47
CCL28-203ENST00000513525 ABCF2Q9UG63 623 aa12.09□□□□□ -0.47
CCL28-203ENST00000513525 ZBTB7BO15156 539 aaPredicted RBP12.08□□□□□ -0.48
CCL28-203ENST00000513525 RLBP1P12271 317 aa12.08□□□□□ -0.48
CCL28-203ENST00000513525 PPATQ06203 517 aa12.08□□□□□ -0.48
CCL28-203ENST00000513525 ERICH6Q7L0X2 663 aa12.08□□□□□ -0.48
CCL28-203ENST00000513525 SPATA5Q8NB90 893 aa12.08□□□□□ -0.48
CCL28-203ENST00000513525 ERO1AQ96HE7 468 aa12.08□□□□□ -0.48
CCL28-203ENST00000513525 COL2A1P02458 1487 aaPredicted RBP12.08□□□□□ -0.48
CCL28-203ENST00000513525 KIAA0100Q14667 2235 aaKnown RBP12.07□□□□□ -0.48
CCL28-203ENST00000513525 IRF6O14896 467 aa12.07□□□□□ -0.48
CCL28-203ENST00000513525 CETPP11597 493 aa12.07□□□□□ -0.48
CCL28-203ENST00000513525 INPP5BP32019 993 aa12.07□□□□□ -0.48
CCL28-203ENST00000513525 MECOMQ03112 1051 aa12.07□□□□□ -0.48
CCL28-203ENST00000513525 SNAPC2Q13487 334 aa12.07□□□□□ -0.48
CCL28-203ENST00000513525 ARSIQ5FYB1 569 aa12.07□□□□□ -0.48
CCL28-203ENST00000513525 NOL9Q5SY16 702 aaKnown RBP12.07□□□□□ -0.48
CCL28-203ENST00000513525 GORABQ5T7V8 394 aa12.07□□□□□ -0.48
CCL28-203ENST00000513525 MIGA2Q7L4E1 593 aa12.07□□□□□ -0.48
CCL28-203ENST00000513525 OTOP1Q7RTM1 612 aa12.07□□□□□ -0.48
CCL28-203ENST00000513525 ITPRIPQ8IWB1 547 aa12.07□□□□□ -0.48
CCL28-203ENST00000513525 ZNF384Q8TF68 577 aa12.07□□□□□ -0.48
CCL28-203ENST00000513525 MYH7P12883 1935 aa12.07□□□□□ -0.48
CCL28-203ENST00000513525 LOC285556D6RIA3 1793 aa12.07□□□□□ -0.48
CCL28-203ENST00000513525 GPR75-ASB3A0A0A6YYF3 556 aa12.06□□□□□ -0.48
CCL28-203ENST00000513525 WDHD1O75717 1129 aaPredicted RBP12.06□□□□□ -0.48
CCL28-203ENST00000513525 MAP4K4O95819 1239 aaPredicted RBP12.06□□□□□ -0.48
CCL28-203ENST00000513525 UQCRFS1P1P0C7P4 283 aa12.06□□□□□ -0.48
CCL28-203ENST00000513525 MCAMP43121 646 aa12.06□□□□□ -0.48
CCL28-203ENST00000513525 BTDP43251 543 aa12.06□□□□□ -0.48
CCL28-203ENST00000513525 RGS3P49796 1198 aa12.06□□□□□ -0.48
CCL28-203ENST00000513525 SP3Q02447 781 aa12.06□□□□□ -0.48
CCL28-203ENST00000513525 MAP3K10Q02779 954 aa12.06□□□□□ -0.48
CCL28-203ENST00000513525 TAF1CQ15572 869 aaPredicted RBP12.06□□□□□ -0.48
CCL28-203ENST00000513525 TNNI3KQ59H18 835 aa12.06□□□□□ -0.48
CCL28-203ENST00000513525 FAM43AQ8N2R8 423 aa12.06□□□□□ -0.48
CCL28-203ENST00000513525 NSUN4Q96CB9 384 aaKnown RBP12.06□□□□□ -0.48
CCL28-203ENST00000513525 ZFYVE28Q9HCC9 887 aa12.06□□□□□ -0.48
CCL28-203ENST00000513525 NOP58Q9Y2X3 529 aaKnown RBP12.06□□□□□ -0.48
CCL28-203ENST00000513525 TRIM17Q9Y577 477 aa12.06□□□□□ -0.48
CCL28-203ENST00000513525 FPGT-TNNI3KV9GXZ4 949 aa12.06□□□□□ -0.48
CCL28-203ENST00000513525 BRCA2P51587 3418 aa12.06□□□□□ -0.48
CCL28-203ENST00000513525 LDHCP07864 332 aa12.06□□□□□ -0.48
CCL28-203ENST00000513525 RHBDL3P58872 404 aa12.06□□□□□ -0.48
CCL28-203ENST00000513525 GSTO1P78417 241 aa12.06□□□□□ -0.48
CCL28-203ENST00000513525 LSM11P83369 360 aaKnown RBP eCLIP12.06□□□□□ -0.48
CCL28-203ENST00000513525 PI16Q6UXB8 463 aa12.06□□□□□ -0.48
CCL28-203ENST00000513525 ZFPM1Q8IX07 1006 aa12.06□□□□□ -0.48
CCL28-203ENST00000513525 ZNF512BQ96KM6 892 aaPredicted RBP12.06□□□□□ -0.48
CCL28-203ENST00000513525 C1orf115Q9H7X2 142 aa12.06□□□□□ -0.48
CCL28-203ENST00000513525 KCNH4Q9UQ05 1017 aa12.06□□□□□ -0.48
CCL28-203ENST00000513525 BTBD19C9JJ37 291 aa12.05□□□□□ -0.48
CCL28-203ENST00000513525 IGSF3O75054 1194 aa12.05□□□□□ -0.48
CCL28-203ENST00000513525 SURF6O75683 361 aaKnown RBP12.05□□□□□ -0.48
CCL28-203ENST00000513525 SOX10P56693 466 aa12.05□□□□□ -0.48
CCL28-203ENST00000513525 SH3BP5LQ7L8J4 393 aa12.05□□□□□ -0.48
CCL28-203ENST00000513525 CD99L2Q8TCZ2 262 aa12.05□□□□□ -0.48
CCL28-203ENST00000513525 DDX4Q9NQI0 724 aaKnown RBP12.05□□□□□ -0.48
CCL28-203ENST00000513525 DOCK3Q8IZD9 2030 aa12.04□□□□□ -0.48
CCL28-203ENST00000513525 MYH8P13535 1937 aa12.04□□□□□ -0.48
CCL28-203ENST00000513525 DDTLA6NHG4 134 aaPredicted RBP12.04□□□□□ -0.48
CCL28-203ENST00000513525 PHF20L1A8MW92 1017 aa12.04□□□□□ -0.48
CCL28-203ENST00000513525 TLR2O60603 784 aa12.04□□□□□ -0.48
CCL28-203ENST00000513525 OS9Q13438 667 aaPredicted RBP12.04□□□□□ -0.48
CCL28-203ENST00000513525 CCDC158Q5M9N0 1113 aa12.04□□□□□ -0.48
CCL28-203ENST00000513525 CEP85Q6P2H3 762 aa12.04□□□□□ -0.48
CCL28-203ENST00000513525 TBC1D9Q6ZT07 1266 aa12.04□□□□□ -0.48
CCL28-203ENST00000513525 PANK1Q8TE04 598 aa12.04□□□□□ -0.48
CCL28-203ENST00000513525 DBNDD2Q9BQY9 259 aa12.04□□□□□ -0.48
CCL28-203ENST00000513525 EFCC1Q9HA90 598 aa12.04□□□□□ -0.48
CCL28-203ENST00000513525 PTPN22Q9Y2R2 807 aa12.04□□□□□ -0.48
CCL28-203ENST00000513525 TBC1D12O60347 775 aa12.03□□□□□ -0.48
CCL28-203ENST00000513525 CAP1Q01518 475 aa12.03□□□□□ -0.48
CCL28-203ENST00000513525 ARHGEF6Q15052 776 aa12.03□□□□□ -0.48
CCL28-203ENST00000513525 TTC39AQ5SRH9 613 aa12.03□□□□□ -0.48
CCL28-203ENST00000513525 ANKRD23Q86SG2 305 aa12.03□□□□□ -0.48
CCL28-203ENST00000513525 SCYL3Q8IZE3 742 aa12.03□□□□□ -0.48
CCL28-203ENST00000513525 RAI14Q9P0K7 980 aa12.03□□□□□ -0.48
CCL28-203ENST00000513525 NAV1Q8NEY1 1877 aa12.03□□□□□ -0.48
CCL28-203ENST00000513525 DDX60LQ5H9U9 1706 aaKnown RBP12.03□□□□□ -0.48
CCL28-203ENST00000513525 CXCL11O14625 94 aa12.02□□□□□ -0.48
CCL28-203ENST00000513525 PBX2P40425 430 aa12.02□□□□□ -0.48
CCL28-203ENST00000513525 PICALMQ13492 652 aa12.02□□□□□ -0.48
CCL28-203ENST00000513525 MOGSQ13724 837 aa12.02□□□□□ -0.48
CCL28-203ENST00000513525 ZSCAN29Q8IWY8 852 aaPredicted RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms