RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 USP2O75604 605 aaPredicted RBP19.69■□□□□ 0.74
HMGCL-209ENST00000513148 CHMLP26374 656 aa19.69■□□□□ 0.74
HMGCL-209ENST00000513148 FKBP1BP68106 108 aa19.69■□□□□ 0.74
HMGCL-209ENST00000513148 PAXIP1Q6ZW49 1069 aaPredicted RBP19.69■□□□□ 0.74
HMGCL-209ENST00000513148 EPB41L4AQ9HCS5 686 aaPredicted RBP19.69■□□□□ 0.74
HMGCL-209ENST00000513148 CEP350Q5VT06 3117 aa19.69■□□□□ 0.74
HMGCL-209ENST00000513148 CYP2D6P10635 497 aa19.68■□□□□ 0.74
HMGCL-209ENST00000513148 IREB2P48200 963 aaKnown RBP19.68■□□□□ 0.74
HMGCL-209ENST00000513148 CRACR2BQ8N4Y2 399 aaPredicted RBP19.68■□□□□ 0.74
HMGCL-209ENST00000513148 WRNIP1Q96S55 665 aa19.68■□□□□ 0.74
HMGCL-209ENST00000513148 IL25Q9H293 177 aa19.68■□□□□ 0.74
HMGCL-209ENST00000513148 PI4KBQ9UBF8 816 aa19.68■□□□□ 0.74
HMGCL-209ENST00000513148 CYP2D7A0A087X1C5 515 aa19.68■□□□□ 0.74
HMGCL-209ENST00000513148 TDO2P48775 406 aa19.68■□□□□ 0.74
HMGCL-209ENST00000513148 PLCD1P51178 756 aa19.68■□□□□ 0.74
HMGCL-209ENST00000513148 GRM1Q13255 1194 aa19.68■□□□□ 0.74
HMGCL-209ENST00000513148 TRIM34Q9BYJ4 488 aa19.68■□□□□ 0.74
HMGCL-209ENST00000513148 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.68■□□□□ 0.74
HMGCL-209ENST00000513148 PATL2C9JE40 543 aaKnown RBP19.67■□□□□ 0.74
HMGCL-209ENST00000513148 USP17L12C9JPN9 530 aa19.67■□□□□ 0.74
HMGCL-209ENST00000513148 USP17L21D6R901 530 aa19.67■□□□□ 0.74
HMGCL-209ENST00000513148 ZNF341Q9BYN7 854 aa19.67■□□□□ 0.74
HMGCL-209ENST00000513148 LAMB1P07942 1786 aa19.67■□□□□ 0.74
HMGCL-209ENST00000513148 TTC6Q86TZ1 520 aa19.66■□□□□ 0.74
HMGCL-209ENST00000513148 KLRG1Q96E93 195 aa19.66■□□□□ 0.74
HMGCL-209ENST00000513148 SMIM22K7EJ46 135 aa19.66■□□□□ 0.74
HMGCL-209ENST00000513148 FOXP2O15409 715 aa19.66■□□□□ 0.74
HMGCL-209ENST00000513148 L1TD1Q5T7N2 865 aaKnown RBP19.66■□□□□ 0.74
HMGCL-209ENST00000513148 CTR9Q6PD62 1173 aa19.66■□□□□ 0.74
HMGCL-209ENST00000513148 AMOTL1Q8IY63 956 aa19.66■□□□□ 0.74
HMGCL-209ENST00000513148 IFNL3Q8IZI9 196 aa19.66■□□□□ 0.74
HMGCL-209ENST00000513148 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.66■□□□□ 0.74
HMGCL-209ENST00000513148 ZKSCAN4Q969J2 545 aaPredicted RBP19.66■□□□□ 0.74
HMGCL-209ENST00000513148 CLMNQ96JQ2 1002 aa19.66■□□□□ 0.74
HMGCL-209ENST00000513148 NACAP1Q9BZK3 213 aa19.66■□□□□ 0.74
HMGCL-209ENST00000513148 MFAP1P55081 439 aaKnown RBP19.65■□□□□ 0.74
HMGCL-209ENST00000513148 MAP3K11Q16584 847 aa19.65■□□□□ 0.74
HMGCL-209ENST00000513148 RUFY2Q8WXA3 655 aa19.65■□□□□ 0.74
HMGCL-209ENST00000513148 NAPBQ9H115 298 aa19.65■□□□□ 0.74
HMGCL-209ENST00000513148 DNAJC18Q9H819 358 aa19.65■□□□□ 0.74
HMGCL-209ENST00000513148 SERPINB13Q9UIV8 391 aa19.65■□□□□ 0.74
HMGCL-209ENST00000513148 MINDY4BA8MYZ0 360 aa19.64■□□□□ 0.74
HMGCL-209ENST00000513148 HSPD1P10809 573 aaKnown RBP19.64■□□□□ 0.74
HMGCL-209ENST00000513148 INPP5BP32019 993 aa19.64■□□□□ 0.74
HMGCL-209ENST00000513148 DEFB115Q30KQ5 88 aa19.64■□□□□ 0.74
HMGCL-209ENST00000513148 STK11IPQ8N1F8 1099 aa19.64■□□□□ 0.74
HMGCL-209ENST00000513148 ARPP21Q9UBL0 812 aaPredicted RBP19.64■□□□□ 0.74
HMGCL-209ENST00000513148 HERC5Q9UII4 1024 aaKnown RBP19.64■□□□□ 0.74
HMGCL-209ENST00000513148 ZNF157P51786 506 aaPredicted RBP19.64■□□□□ 0.73
HMGCL-209ENST00000513148 VGLL4Q14135 290 aa19.64■□□□□ 0.73
HMGCL-209ENST00000513148 CYP4F22Q6NT55 531 aa19.64■□□□□ 0.73
HMGCL-209ENST00000513148 GIMAP6Q6P9H5 292 aa19.64■□□□□ 0.73
HMGCL-209ENST00000513148 ANKRD13AQ8IZ07 590 aa19.64■□□□□ 0.73
HMGCL-209ENST00000513148 RASSF10A6NK89 507 aa19.63■□□□□ 0.73
HMGCL-209ENST00000513148 MAP3K9P80192 1104 aa19.63■□□□□ 0.73
HMGCL-209ENST00000513148 LDLRAD1Q5T700 205 aa19.63■□□□□ 0.73
HMGCL-209ENST00000513148 C12orf60Q5U649 245 aa19.63■□□□□ 0.73
HMGCL-209ENST00000513148 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.63■□□□□ 0.73
HMGCL-209ENST00000513148 DYNLL2Q96FJ2 89 aa19.63■□□□□ 0.73
HMGCL-209ENST00000513148 CSADQ9Y600 493 aa19.63■□□□□ 0.73
HMGCL-209ENST00000513148 RAD50Q92878 1312 aa19.63■□□□□ 0.73
HMGCL-209ENST00000513148 MYH8P13535 1937 aa19.63■□□□□ 0.73
HMGCL-209ENST00000513148 PHF20L1A8MW92 1017 aa19.63■□□□□ 0.73
HMGCL-209ENST00000513148 TBC1D12O60347 775 aa19.63■□□□□ 0.73
HMGCL-209ENST00000513148 CDC45O75419 566 aa19.63■□□□□ 0.73
HMGCL-209ENST00000513148 RGMBQ6NW40 437 aa19.63■□□□□ 0.73
HMGCL-209ENST00000513148 FOXP4Q8IVH2 680 aaPredicted RBP19.63■□□□□ 0.73
HMGCL-209ENST00000513148 SLC44A5Q8NCS7 719 aa19.63■□□□□ 0.73
HMGCL-209ENST00000513148 ELP3Q9H9T3 547 aa19.63■□□□□ 0.73
HMGCL-209ENST00000513148 ATAD5Q96QE3 1844 aa19.62■□□□□ 0.73
HMGCL-209ENST00000513148 MAP3K10Q02779 954 aa19.62■□□□□ 0.73
HMGCL-209ENST00000513148 EHD4Q9H223 541 aa19.62■□□□□ 0.73
HMGCL-209ENST00000513148 DOCK1Q14185 1865 aa19.62■□□□□ 0.73
HMGCL-209ENST00000513148 SGSM2O43147 1006 aa19.61■□□□□ 0.73
HMGCL-209ENST00000513148 MKRN3Q13064 507 aaKnown RBP19.61■□□□□ 0.73
HMGCL-209ENST00000513148 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.61■□□□□ 0.73
HMGCL-209ENST00000513148 ZNF112Q9UJU3 913 aa19.61■□□□□ 0.73
HMGCL-209ENST00000513148 RRP9O43818 475 aaKnown RBP19.61■□□□□ 0.73
HMGCL-209ENST00000513148 RRP1BQ14684 758 aaKnown RBP19.61■□□□□ 0.73
HMGCL-209ENST00000513148 CASC1Q6TDU7 716 aa19.61■□□□□ 0.73
HMGCL-209ENST00000513148 METTL16Q86W50 562 aaKnown RBP19.61■□□□□ 0.73
HMGCL-209ENST00000513148 SLC10A4Q96EP9 437 aa19.61■□□□□ 0.73
HMGCL-209ENST00000513148 SNCAIPQ9Y6H5 919 aa19.61■□□□□ 0.73
HMGCL-209ENST00000513148 GDF11O95390 407 aa19.6■□□□□ 0.73
HMGCL-209ENST00000513148 FGAP02671 866 aa19.6■□□□□ 0.73
HMGCL-209ENST00000513148 SBK1Q52WX2 424 aa19.6■□□□□ 0.73
HMGCL-209ENST00000513148 CNKSR2Q8WXI2 1034 aa19.6■□□□□ 0.73
HMGCL-209ENST00000513148 HHIPL1Q96JK4 782 aa19.6■□□□□ 0.73
HMGCL-209ENST00000513148 CAPNS2Q96L46 248 aa19.6■□□□□ 0.73
HMGCL-209ENST00000513148 ESYT1Q9BSJ8 1104 aa19.6■□□□□ 0.73
HMGCL-209ENST00000513148 PCNTO95613 3336 aa19.6■□□□□ 0.73
HMGCL-209ENST00000513148 GABPAQ06546 454 aa19.59■□□□□ 0.73
HMGCL-209ENST00000513148 SHROOM1Q2M3G4 852 aaPredicted RBP19.59■□□□□ 0.73
HMGCL-209ENST00000513148 RASAL3Q86YV0 1011 aa19.59■□□□□ 0.73
HMGCL-209ENST00000513148 SHMT1P34896 483 aa19.59■□□□□ 0.73
HMGCL-209ENST00000513148 VEGFBP49765 207 aa19.59■□□□□ 0.73
HMGCL-209ENST00000513148 PPARAQ07869 468 aa19.59■□□□□ 0.73
HMGCL-209ENST00000513148 HAND2P61296 217 aa19.58■□□□□ 0.73
HMGCL-209ENST00000513148 SCYL3Q8IZE3 742 aa19.58■□□□□ 0.73
HMGCL-209ENST00000513148 OPTNQ96CV9 577 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms