RNA–Protein interactions for RNA: ENST00000512985.1

CDK7-209, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 261 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-209ENST00000512985 VGLL4Q14135 290 aa15.3■□□□□ 0.04
CDK7-209ENST00000512985 MCMDC2Q4G0Z9 681 aa15.3■□□□□ 0.04
CDK7-209ENST00000512985 SH3BP5LQ7L8J4 393 aa15.3■□□□□ 0.04
CDK7-209ENST00000512985 STRBPQ96SI9 672 aaKnown RBP15.3■□□□□ 0.04
CDK7-209ENST00000512985 DCP1AQ9NPI6 582 aaPredicted RBP15.3■□□□□ 0.04
CDK7-209ENST00000512985 GINM1Q9NU53 330 aa15.3■□□□□ 0.04
CDK7-209ENST00000512985 ARPP21Q9UBL0 812 aaPredicted RBP15.3■□□□□ 0.04
CDK7-209ENST00000512985 SERPINB13Q9UIV8 391 aa15.3■□□□□ 0.04
CDK7-209ENST00000512985 PALD1Q9ULE6 856 aa15.3■□□□□ 0.04
CDK7-209ENST00000512985 NOL9Q5SY16 702 aaKnown RBP15.29■□□□□ 0.04
CDK7-209ENST00000512985 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.29■□□□□ 0.04
CDK7-209ENST00000512985 ERO1BQ86YB8 467 aa15.29■□□□□ 0.04
CDK7-209ENST00000512985 SDR42E1Q8WUS8 393 aa15.29■□□□□ 0.04
CDK7-209ENST00000512985 RUFY2Q8WXA3 655 aa15.29■□□□□ 0.04
CDK7-209ENST00000512985 TBC1D2Q9BYX2 928 aa15.29■□□□□ 0.04
CDK7-209ENST00000512985 ELP3Q9H9T3 547 aa15.29■□□□□ 0.04
CDK7-209ENST00000512985 ZNF287Q9HBT7 754 aa15.29■□□□□ 0.04
CDK7-209ENST00000512985 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.29■□□□□ 0.04
CDK7-209ENST00000512985 FZD1Q9UP38 647 aa15.29■□□□□ 0.04
CDK7-209ENST00000512985 MANSC4A6NHS7 340 aaPredicted RBP15.28■□□□□ 0.04
CDK7-209ENST00000512985 FAM155AB1AL88 458 aaPredicted RBP15.28■□□□□ 0.04
CDK7-209ENST00000512985 PATL2C9JE40 543 aaKnown RBP15.28■□□□□ 0.04
CDK7-209ENST00000512985 CA12O43570 354 aa15.28■□□□□ 0.04
CDK7-209ENST00000512985 SDSP20132 328 aa15.28■□□□□ 0.04
CDK7-209ENST00000512985 TDO2P48775 406 aa15.28■□□□□ 0.04
CDK7-209ENST00000512985 PPATQ06203 517 aa15.28■□□□□ 0.04
CDK7-209ENST00000512985 SPRYD7Q5W111 196 aa15.28■□□□□ 0.04
CDK7-209ENST00000512985 OTUD7BQ6GQQ9 843 aa15.28■□□□□ 0.04
CDK7-209ENST00000512985 METTL16Q86W50 562 aaKnown RBP15.28■□□□□ 0.04
CDK7-209ENST00000512985 SCYL3Q8IZE3 742 aa15.28■□□□□ 0.04
CDK7-209ENST00000512985 ZKSCAN4Q969J2 545 aaPredicted RBP15.28■□□□□ 0.04
CDK7-209ENST00000512985 OPTNQ96CV9 577 aa15.28■□□□□ 0.04
CDK7-209ENST00000512985 WNK4Q96J92 1243 aa15.28■□□□□ 0.04
CDK7-209ENST00000512985 SWAP70Q9UH65 585 aa15.28■□□□□ 0.04
CDK7-209ENST00000512985 NAV1Q8NEY1 1877 aa15.27■□□□□ 0.04
CDK7-209ENST00000512985 CDK5RAP2Q96SN8 1893 aa15.27■□□□□ 0.04
CDK7-209ENST00000512985 SLC3A2P08195 630 aaKnown RBP15.27■□□□□ 0.04
CDK7-209ENST00000512985 GTF2A2P52657 109 aa15.27■□□□□ 0.04
CDK7-209ENST00000512985 SLFNL1Q499Z3 407 aa15.27■□□□□ 0.04
CDK7-209ENST00000512985 CLMNQ96JQ2 1002 aa15.27■□□□□ 0.04
CDK7-209ENST00000512985 CEP350Q5VT06 3117 aa15.27■□□□□ 0.03
CDK7-209ENST00000512985 MYH1P12882 1939 aa15.26■□□□□ 0.03
CDK7-209ENST00000512985 SPDYE5A6NIY4 337 aa15.26■□□□□ 0.03
CDK7-209ENST00000512985 PHF20L1A8MW92 1017 aa15.26■□□□□ 0.03
CDK7-209ENST00000512985 M0R2C6 588 aa15.26■□□□□ 0.03
CDK7-209ENST00000512985 PRKAB2O43741 272 aa15.26■□□□□ 0.03
CDK7-209ENST00000512985 AOC2O75106 756 aa15.26■□□□□ 0.03
CDK7-209ENST00000512985 ASNSP08243 561 aa15.26■□□□□ 0.03
CDK7-209ENST00000512985 INPP5BP32019 993 aa15.26■□□□□ 0.03
CDK7-209ENST00000512985 PPIL2Q13356 520 aa15.26■□□□□ 0.03
CDK7-209ENST00000512985 PIAS4Q8N2W9 510 aaPredicted RBP15.26■□□□□ 0.03
CDK7-209ENST00000512985 OTUD5Q96G74 571 aa15.26■□□□□ 0.03
CDK7-209ENST00000512985 NAPBQ9H115 298 aa15.26■□□□□ 0.03
CDK7-209ENST00000512985 AS3MTQ9HBK9 375 aa15.26■□□□□ 0.03
CDK7-209ENST00000512985 CABP5Q9NP86 173 aa15.26■□□□□ 0.03
CDK7-209ENST00000512985 SNCAIPQ9Y6H5 919 aa15.26■□□□□ 0.03
CDK7-209ENST00000512985 THSD7BQ9C0I4 1608 aa15.25■□□□□ 0.03
CDK7-209ENST00000512985 GSG1L2A8MUP6 293 aa15.25■□□□□ 0.03
CDK7-209ENST00000512985 USP17L12C9JPN9 530 aa15.25■□□□□ 0.03
CDK7-209ENST00000512985 USP17L21D6R901 530 aa15.25■□□□□ 0.03
CDK7-209ENST00000512985 ALDH1A1P00352 501 aa15.25■□□□□ 0.03
CDK7-209ENST00000512985 CHGBP05060 677 aa15.25■□□□□ 0.03
CDK7-209ENST00000512985 CAP2P40123 477 aa15.25■□□□□ 0.03
CDK7-209ENST00000512985 KIF23Q02241 960 aaPredicted RBP15.25■□□□□ 0.03
CDK7-209ENST00000512985 SNAPC2Q13487 334 aa15.25■□□□□ 0.03
CDK7-209ENST00000512985 SLC4A8Q2Y0W8 1093 aa15.25■□□□□ 0.03
CDK7-209ENST00000512985 CERKLQ49MI3 558 aaPredicted RBP15.25■□□□□ 0.03
CDK7-209ENST00000512985 SBK1Q52WX2 424 aa15.25■□□□□ 0.03
CDK7-209ENST00000512985 CASC1Q6TDU7 716 aa15.25■□□□□ 0.03
CDK7-209ENST00000512985 CCDC171Q6TFL3 1326 aa15.24■□□□□ 0.03
CDK7-209ENST00000512985 RAD50Q92878 1312 aa15.24■□□□□ 0.03
CDK7-209ENST00000512985 CETPP11597 493 aa15.24■□□□□ 0.03
CDK7-209ENST00000512985 GSPT1P15170 499 aaKnown RBP15.24■□□□□ 0.03
CDK7-209ENST00000512985 MKRN3Q13064 507 aaKnown RBP15.24■□□□□ 0.03
CDK7-209ENST00000512985 NMIQ13287 307 aaPredicted RBP15.24■□□□□ 0.03
CDK7-209ENST00000512985 C12orf60Q5U649 245 aa15.24■□□□□ 0.03
CDK7-209ENST00000512985 CWC27Q6UX04 472 aaKnown RBP15.24■□□□□ 0.03
CDK7-209ENST00000512985 IFNL3Q8IZI9 196 aa15.24■□□□□ 0.03
CDK7-209ENST00000512985 FAM227BQ96M60 508 aa15.24■□□□□ 0.03
CDK7-209ENST00000512985 SEC62Q99442 399 aaKnown RBP15.24■□□□□ 0.03
CDK7-209ENST00000512985 OTOFQ9HC10 1997 aa15.24■□□□□ 0.03
CDK7-209ENST00000512985 A0A0D9SFI3 127 aa15.23■□□□□ 0.03
CDK7-209ENST00000512985 FAM196BA6NMK8 535 aa15.23■□□□□ 0.03
CDK7-209ENST00000512985 USP17L5A8MUK1 530 aa15.23■□□□□ 0.03
CDK7-209ENST00000512985 CXCL11O14625 94 aa15.23■□□□□ 0.03
CDK7-209ENST00000512985 PTPRAP18433 802 aa15.23■□□□□ 0.03
CDK7-209ENST00000512985 TM4SF4P48230 202 aa15.23■□□□□ 0.03
CDK7-209ENST00000512985 PLCD1P51178 756 aa15.23■□□□□ 0.03
CDK7-209ENST00000512985 PDE4BQ07343 736 aa15.23■□□□□ 0.03
CDK7-209ENST00000512985 BMP2KLQ5H9B9 411 aa15.23■□□□□ 0.03
CDK7-209ENST00000512985 TATDN1Q6P1N9 297 aa15.23■□□□□ 0.03
CDK7-209ENST00000512985 CTR9Q6PD62 1173 aa15.23■□□□□ 0.03
CDK7-209ENST00000512985 CCDC17Q96LX7 622 aa15.23■□□□□ 0.03
CDK7-209ENST00000512985 SAGE1Q9NXZ1 904 aa15.23■□□□□ 0.03
CDK7-209ENST00000512985 DDX60LQ5H9U9 1706 aaKnown RBP15.23■□□□□ 0.03
CDK7-209ENST00000512985 MINDY4BA8MYZ0 360 aa15.22■□□□□ 0.03
CDK7-209ENST00000512985 GABPAQ06546 454 aa15.22■□□□□ 0.03
CDK7-209ENST00000512985 ABCB5Q2M3G0 1257 aa15.22■□□□□ 0.03
CDK7-209ENST00000512985 MKNK2Q9HBH9 465 aa15.22■□□□□ 0.03
CDK7-209ENST00000512985 WBP1LQ9NX94 342 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms