RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.13□□□□□ -0.47
COPS4-211ENST00000511891 DOCK2Q92608 1830 aa12.12□□□□□ -0.47
COPS4-211ENST00000511891 MLLT1Q03111 559 aaPredicted RBP12.12□□□□□ -0.47
COPS4-211ENST00000511891 CCDC84Q86UT8 332 aaPredicted RBP12.12□□□□□ -0.47
COPS4-211ENST00000511891 TEX11Q8IYF3 940 aa12.12□□□□□ -0.47
COPS4-211ENST00000511891 ERO1AQ96HE7 468 aa12.12□□□□□ -0.47
COPS4-211ENST00000511891 ZNF512BQ96KM6 892 aaPredicted RBP12.12□□□□□ -0.47
COPS4-211ENST00000511891 ZBTB40Q9NUA8 1239 aa12.12□□□□□ -0.47
COPS4-211ENST00000511891 AATFQ9NY61 560 aaKnown RBP eCLIP12.12□□□□□ -0.47
COPS4-211ENST00000511891 KCNH4Q9UQ05 1017 aa12.12□□□□□ -0.47
COPS4-211ENST00000511891 ECM2O94769 699 aaPredicted RBP12.11□□□□□ -0.47
COPS4-211ENST00000511891 PTPRAP18433 802 aa12.11□□□□□ -0.47
COPS4-211ENST00000511891 MAP3K10Q02779 954 aa12.11□□□□□ -0.47
COPS4-211ENST00000511891 MOGSQ13724 837 aa12.11□□□□□ -0.47
COPS4-211ENST00000511891 ERC1Q8IUD2 1116 aa12.11□□□□□ -0.47
COPS4-211ENST00000511891 SCYL3Q8IZE3 742 aa12.11□□□□□ -0.47
COPS4-211ENST00000511891 RHPN1Q8TCX5 695 aa12.11□□□□□ -0.47
COPS4-211ENST00000511891 NOL10Q9BSC4 688 aaKnown RBP12.11□□□□□ -0.47
COPS4-211ENST00000511891 OSBPL5Q9H0X9 879 aaPredicted RBP12.11□□□□□ -0.47
COPS4-211ENST00000511891 ANTXR1Q9H6X2 564 aa12.11□□□□□ -0.47
COPS4-211ENST00000511891 DDX19BQ9UMR2 479 aa12.11□□□□□ -0.47
COPS4-211ENST00000511891 ZHX2Q9Y6X8 837 aa12.11□□□□□ -0.47
COPS4-211ENST00000511891 MYO5AQ9Y4I1 1855 aaKnown RBP12.1□□□□□ -0.47
COPS4-211ENST00000511891 PDHXO00330 501 aa12.1□□□□□ -0.47
COPS4-211ENST00000511891 TLR2O60603 784 aa12.1□□□□□ -0.47
COPS4-211ENST00000511891 IDH1O75874 414 aaKnown RBP12.1□□□□□ -0.47
COPS4-211ENST00000511891 DYNLL1P63167 89 aaKnown RBP12.1□□□□□ -0.47
COPS4-211ENST00000511891 TGFBRAP1Q8WUH2 860 aa12.1□□□□□ -0.47
COPS4-211ENST00000511891 ARHGAP39Q9C0H5 1083 aa12.1□□□□□ -0.47
COPS4-211ENST00000511891 EFCC1Q9HA90 598 aa12.1□□□□□ -0.47
COPS4-211ENST00000511891 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.1□□□□□ -0.47
COPS4-211ENST00000511891 PICK1Q9NRD5 415 aa12.1□□□□□ -0.47
COPS4-211ENST00000511891 BMP2KQ9NSY1 1161 aaPredicted RBP12.1□□□□□ -0.47
COPS4-211ENST00000511891 TRPC6Q9Y210 931 aa12.1□□□□□ -0.47
COPS4-211ENST00000511891 PTPN22Q9Y2R2 807 aa12.1□□□□□ -0.47
COPS4-211ENST00000511891 CTNND1O60716 968 aaKnown RBP12.09□□□□□ -0.47
COPS4-211ENST00000511891 BAG3O95817 575 aa12.09□□□□□ -0.47
COPS4-211ENST00000511891 MAP4K4O95819 1239 aaPredicted RBP12.09□□□□□ -0.47
COPS4-211ENST00000511891 CYP7A1P22680 504 aa12.09□□□□□ -0.47
COPS4-211ENST00000511891 PPP4CP60510 307 aa12.09□□□□□ -0.47
COPS4-211ENST00000511891 RRP1BQ14684 758 aaKnown RBP12.09□□□□□ -0.47
COPS4-211ENST00000511891 HSP90AB4PQ58FF6 505 aa12.09□□□□□ -0.47
COPS4-211ENST00000511891 GPAT2Q6NUI2 795 aa12.09□□□□□ -0.47
COPS4-211ENST00000511891 ANKRD23Q86SG2 305 aa12.09□□□□□ -0.47
COPS4-211ENST00000511891 MAPKAPK5Q8IW41 473 aa12.09□□□□□ -0.47
COPS4-211ENST00000511891 RPAP2Q8IXW5 612 aaPredicted RBP12.09□□□□□ -0.47
COPS4-211ENST00000511891 KIF12Q96FN5 646 aa12.09□□□□□ -0.47
COPS4-211ENST00000511891 ZCCHC17Q9NP64 241 aaKnown RBP12.09□□□□□ -0.47
COPS4-211ENST00000511891 CPA4Q9UI42 421 aa12.09□□□□□ -0.47
COPS4-211ENST00000511891 MAST2Q6P0Q8 1798 aa12.09□□□□□ -0.47
COPS4-211ENST00000511891 TRIM75PA6NK02 468 aa12.08□□□□□ -0.48
COPS4-211ENST00000511891 CXCL11O14625 94 aa12.08□□□□□ -0.48
COPS4-211ENST00000511891 TBC1D12O60347 775 aa12.08□□□□□ -0.48
COPS4-211ENST00000511891 HMMRO75330 724 aa12.08□□□□□ -0.48
COPS4-211ENST00000511891 SLC4A8Q2Y0W8 1093 aa12.08□□□□□ -0.48
COPS4-211ENST00000511891 MAGEB6Q8N7X4 407 aa12.08□□□□□ -0.48
COPS4-211ENST00000511891 MIGA1Q8NAN2 632 aa12.08□□□□□ -0.48
COPS4-211ENST00000511891 SAP30BPQ9UHR5 308 aaKnown RBP12.08□□□□□ -0.48
COPS4-211ENST00000511891 AFG3L2Q9Y4W6 797 aa12.08□□□□□ -0.48
COPS4-211ENST00000511891 ZSWIM8A7E2V4 1837 aa12.08□□□□□ -0.48
COPS4-211ENST00000511891 A0A0G2JLL6 359 aaPredicted RBP12.07□□□□□ -0.48
COPS4-211ENST00000511891 CYP2C8P10632 490 aa12.07□□□□□ -0.48
COPS4-211ENST00000511891 PLCG2P16885 1265 aa12.07□□□□□ -0.48
COPS4-211ENST00000511891 C17orf99Q6UX52 265 aa12.07□□□□□ -0.48
COPS4-211ENST00000511891 GADL1Q6ZQY3 521 aa12.07□□□□□ -0.48
COPS4-211ENST00000511891 PRRT2Q7Z6L0 340 aaPredicted RBP12.07□□□□□ -0.48
COPS4-211ENST00000511891 CLASRPQ8N2M8 674 aaKnown RBP12.07□□□□□ -0.48
COPS4-211ENST00000511891 KIF1BPQ96EK5 621 aa12.07□□□□□ -0.48
COPS4-211ENST00000511891 PALD1Q9ULE6 856 aa12.07□□□□□ -0.48
COPS4-211ENST00000511891 COL2A1P02458 1487 aaPredicted RBP12.07□□□□□ -0.48
COPS4-211ENST00000511891 FLT1P17948 1338 aa12.07□□□□□ -0.48
COPS4-211ENST00000511891 ADGRA2Q96PE1 1338 aa12.07□□□□□ -0.48
COPS4-211ENST00000511891 DOCK1Q14185 1865 aa12.06□□□□□ -0.48
COPS4-211ENST00000511891 IFIT2P09913 472 aaKnown RBP12.06□□□□□ -0.48
COPS4-211ENST00000511891 CTGFP29279 349 aa12.06□□□□□ -0.48
COPS4-211ENST00000511891 LACTBP83111 547 aaPredicted RBP12.06□□□□□ -0.48
COPS4-211ENST00000511891 PDE3AQ14432 1141 aa12.06□□□□□ -0.48
COPS4-211ENST00000511891 SHROOM1Q2M3G4 852 aaPredicted RBP12.06□□□□□ -0.48
COPS4-211ENST00000511891 DNAJC18Q9H819 358 aa12.06□□□□□ -0.48
COPS4-211ENST00000511891 PTCH2Q9Y6C5 1203 aa12.06□□□□□ -0.48
COPS4-211ENST00000511891 SIPA1L1O43166 1804 aa12.05□□□□□ -0.48
COPS4-211ENST00000511891 PHIPQ8WWQ0 1821 aa12.05□□□□□ -0.48
COPS4-211ENST00000511891 SMARCA5O60264 1052 aaPredicted RBP12.05□□□□□ -0.48
COPS4-211ENST00000511891 RAB11FIP3O75154 756 aa12.05□□□□□ -0.48
COPS4-211ENST00000511891 CAP2P40123 477 aa12.05□□□□□ -0.48
COPS4-211ENST00000511891 JAG1P78504 1218 aa12.05□□□□□ -0.48
COPS4-211ENST00000511891 MAP3K12Q12852 859 aa12.05□□□□□ -0.48
COPS4-211ENST00000511891 KIF22Q14807 665 aa12.05□□□□□ -0.48
COPS4-211ENST00000511891 FASTKD5Q7L8L6 764 aaKnown RBP12.05□□□□□ -0.48
COPS4-211ENST00000511891 EDC3Q96F86 508 aaKnown RBP12.05□□□□□ -0.48
COPS4-211ENST00000511891 PARK7Q99497 189 aaKnown RBP12.05□□□□□ -0.48
COPS4-211ENST00000511891 DNAJC2Q99543 621 aaKnown RBP12.05□□□□□ -0.48
COPS4-211ENST00000511891 DHX36Q9H2U1 1008 aaKnown RBP12.05□□□□□ -0.48
COPS4-211ENST00000511891 CHMP4BQ9H444 224 aaKnown RBP12.05□□□□□ -0.48
COPS4-211ENST00000511891 PI4KBQ9UBF8 816 aa12.05□□□□□ -0.48
COPS4-211ENST00000511891 CDK5RAP2Q96SN8 1893 aa12.04□□□□□ -0.48
COPS4-211ENST00000511891 GOLIM4O00461 696 aa12.04□□□□□ -0.48
COPS4-211ENST00000511891 GDF11O95390 407 aa12.04□□□□□ -0.48
COPS4-211ENST00000511891 MYCP01106 439 aaPredicted RBP12.04□□□□□ -0.48
COPS4-211ENST00000511891 PSMC4P43686 418 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms