RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 METTL24Q5JXM2 366 aa15.1■□□□□ 0.01
COPS4-210ENST00000511708 TRMT44Q8IYL2 757 aaKnown RBP15.1■□□□□ 0.01
COPS4-210ENST00000511708 USP38Q8NB14 1042 aa15.1■□□□□ 0.01
COPS4-210ENST00000511708 SOCS4Q8WXH5 440 aa15.1■□□□□ 0.01
COPS4-210ENST00000511708 USP6NLQ92738 828 aa15.1■□□□□ 0.01
COPS4-210ENST00000511708 NUDT12Q9BQG2 462 aa15.1■□□□□ 0.01
COPS4-210ENST00000511708 ASCC2Q9H1I8 757 aaPredicted RBP15.1■□□□□ 0.01
COPS4-210ENST00000511708 MYO9BQ13459 2157 aa15.09■□□□□ 0.01
COPS4-210ENST00000511708 TMEM265A0A087WTH1 108 aa15.09■□□□□ 0.01
COPS4-210ENST00000511708 DDTLA6NHG4 134 aaPredicted RBP15.09■□□□□ 0.01
COPS4-210ENST00000511708 ZKSCAN1P17029 563 aaPredicted RBP15.09■□□□□ 0.01
COPS4-210ENST00000511708 SUCLG2Q96I99 432 aa15.09■□□□□ 0.01
COPS4-210ENST00000511708 SENP6Q9GZR1 1112 aaPredicted RBP15.09■□□□□ 0.01
COPS4-210ENST00000511708 SPP2Q13103 211 aa15.08■□□□□ 0
COPS4-210ENST00000511708 PABPC4Q13310 644 aaKnown RBP eCLIP15.08■□□□□ 0
COPS4-210ENST00000511708 C9orf78Q9NZ63 289 aaPredicted RBP15.08■□□□□ 0
COPS4-210ENST00000511708 PIEZO1Q92508 2521 aa15.08■□□□□ 0
COPS4-210ENST00000511708 ALDH1L1O75891 902 aa15.07■□□□□ 0
COPS4-210ENST00000511708 IFIT1P09914 478 aaKnown RBP15.07■□□□□ 0
COPS4-210ENST00000511708 HMGCS2P54868 508 aa15.07■□□□□ 0
COPS4-210ENST00000511708 CCL14Q16627 93 aa15.07■□□□□ 0
COPS4-210ENST00000511708 RABL6Q3YEC7 729 aaPredicted RBP15.07■□□□□ 0
COPS4-210ENST00000511708 SH3D19Q5HYK7 790 aa15.07■□□□□ 0
COPS4-210ENST00000511708 PRKAG2Q9UGJ0 569 aa15.07■□□□□ 0
COPS4-210ENST00000511708 TBC1D12O60347 775 aa15.06■□□□□ 0
COPS4-210ENST00000511708 RTP1P59025 263 aa15.06■□□□□ 0
COPS4-210ENST00000511708 PUM3Q15397 648 aaKnown RBP15.06■□□□□ 0
COPS4-210ENST00000511708 MORN1Q5T089 497 aa15.06■□□□□ 0
COPS4-210ENST00000511708 ZNF280CQ8ND82 737 aa15.06■□□□□ 0
COPS4-210ENST00000511708 TBC1D2Q9BYX2 928 aa15.06■□□□□ 0
COPS4-210ENST00000511708 TXNRD2Q9NNW7 524 aa15.06■□□□□ 0
COPS4-210ENST00000511708 DDX4Q9NQI0 724 aaKnown RBP15.06■□□□□ 0
COPS4-210ENST00000511708 GAKO14976 1311 aa15.06■□□□□ 0
COPS4-210ENST00000511708 SALL1Q9NSC2 1324 aa15.06■□□□□ 0
COPS4-210ENST00000511708 PEX10O60683 326 aa15.05■□□□□ -0
COPS4-210ENST00000511708 VAMP4O75379 141 aa15.05■□□□□ -0
COPS4-210ENST00000511708 LDHBP07195 334 aaKnown RBP15.05■□□□□ -0
COPS4-210ENST00000511708 ZEB1P37275 1124 aaPredicted RBP15.05■□□□□ -0
COPS4-210ENST00000511708 ATN1P54259 1190 aaPredicted RBP15.05■□□□□ -0
COPS4-210ENST00000511708 MAP3K12Q12852 859 aa15.05■□□□□ -0
COPS4-210ENST00000511708 ZSCAN29Q8IWY8 852 aaPredicted RBP15.05■□□□□ -0
COPS4-210ENST00000511708 OSBPL5Q9H0X9 879 aaPredicted RBP15.05■□□□□ -0
COPS4-210ENST00000511708 UTYO14607 1347 aa15.05■□□□□ -0
COPS4-210ENST00000511708 CHD9Q3L8U1 2897 aa15.05■□□□□ -0
COPS4-210ENST00000511708 NBPF7P0C2Y1 421 aaPredicted RBP15.04■□□□□ -0
COPS4-210ENST00000511708 MAPK4P31152 587 aa15.04■□□□□ -0
COPS4-210ENST00000511708 RGS2P41220 211 aa15.04■□□□□ -0
COPS4-210ENST00000511708 GRIN2CQ14957 1233 aa15.04■□□□□ -0
COPS4-210ENST00000511708 ANKRD44Q8N8A2 993 aa15.04■□□□□ -0
COPS4-210ENST00000511708 APBA2Q99767 749 aa15.04■□□□□ -0
COPS4-210ENST00000511708 BICC1Q9H694 974 aaKnown RBP15.04■□□□□ -0
COPS4-210ENST00000511708 SYNGAP1Q96PV0 1343 aa15.03■□□□□ -0
COPS4-210ENST00000511708 DNM1LO00429 736 aa15.03■□□□□ -0
COPS4-210ENST00000511708 HOXA7P31268 230 aaPredicted RBP15.03■□□□□ -0
COPS4-210ENST00000511708 PDE3AQ14432 1141 aa15.03■□□□□ -0
COPS4-210ENST00000511708 CCDC27Q2M243 656 aa15.03■□□□□ -0
COPS4-210ENST00000511708 GPRC5AQ8NFJ5 357 aa15.03■□□□□ -0
COPS4-210ENST00000511708 ATXN2LQ8WWM7 1075 aaKnown RBP15.03■□□□□ -0
COPS4-210ENST00000511708 LPAR1Q92633 364 aa15.03■□□□□ -0
COPS4-210ENST00000511708 BADQ92934 168 aa15.03■□□□□ -0
COPS4-210ENST00000511708 P2RX7Q99572 595 aaKnown RBP15.03■□□□□ -0
COPS4-210ENST00000511708 PORCNQ9H237 461 aa15.03■□□□□ -0
COPS4-210ENST00000511708 IL16Q14005 1332 aa15.02■□□□□ -0
COPS4-210ENST00000511708 FAM196BA6NMK8 535 aa15.02■□□□□ -0
COPS4-210ENST00000511708 HERVK_113P62684 666 aa15.02■□□□□ -0
COPS4-210ENST00000511708 IRX3P78415 501 aaPredicted RBP15.02■□□□□ -0
COPS4-210ENST00000511708 RRP1BQ14684 758 aaKnown RBP15.02■□□□□ -0
COPS4-210ENST00000511708 Q3C1V9 767 aa15.02■□□□□ -0
COPS4-210ENST00000511708 GPR142Q7Z601 462 aa15.02■□□□□ -0
COPS4-210ENST00000511708 WWC1Q8IX03 1113 aa15.02■□□□□ -0
COPS4-210ENST00000511708 KLHDC4Q8TBB5 520 aa15.02■□□□□ -0
COPS4-210ENST00000511708 LPIN2Q92539 896 aa15.02■□□□□ -0
COPS4-210ENST00000511708 RBPJLQ9UBG7 517 aa15.02■□□□□ -0
COPS4-210ENST00000511708 DDX20Q9UHI6 824 aaKnown RBP15.02■□□□□ -0
COPS4-210ENST00000511708 ATP11BQ9Y2G3 1177 aa15.02■□□□□ -0
COPS4-210ENST00000511708 REV3LO60673 3130 aa15.01□□□□□ -0.01
COPS4-210ENST00000511708 USP17L5A8MUK1 530 aa15.01□□□□□ -0.01
COPS4-210ENST00000511708 ZBTB22O15209 634 aa15.01□□□□□ -0.01
COPS4-210ENST00000511708 MSCO60682 206 aa15.01□□□□□ -0.01
COPS4-210ENST00000511708 SLC5A1P13866 664 aa15.01□□□□□ -0.01
COPS4-210ENST00000511708 CAP2P40123 477 aa15.01□□□□□ -0.01
COPS4-210ENST00000511708 SNX17Q15036 470 aa15.01□□□□□ -0.01
COPS4-210ENST00000511708 POTEEQ6S8J3 1075 aa15.01□□□□□ -0.01
COPS4-210ENST00000511708 ADAMTS19Q8TE59 1207 aa15.01□□□□□ -0.01
COPS4-210ENST00000511708 FAM163AQ96GL9 167 aaPredicted RBP15.01□□□□□ -0.01
COPS4-210ENST00000511708 SRCIN1Q9C0H9 1055 aa15.01□□□□□ -0.01
COPS4-210ENST00000511708 PDLIM7Q9NR12 457 aa15.01□□□□□ -0.01
COPS4-210ENST00000511708 FANCIQ9NVI1 1328 aa15□□□□□ -0.01
COPS4-210ENST00000511708 NPM3O75607 178 aaKnown RBP15□□□□□ -0.01
COPS4-210ENST00000511708 ERVK-9P63128 1117 aa15□□□□□ -0.01
COPS4-210ENST00000511708 ERVK-24P63145 666 aa15□□□□□ -0.01
COPS4-210ENST00000511708 PICALMQ13492 652 aa15□□□□□ -0.01
COPS4-210ENST00000511708 SLC39A5Q6ZMH5 540 aa15□□□□□ -0.01
COPS4-210ENST00000511708 PLEKHH3Q7Z736 793 aa15□□□□□ -0.01
COPS4-210ENST00000511708 ASB2Q96Q27 587 aa15□□□□□ -0.01
COPS4-210ENST00000511708 WDR18Q9BV38 432 aa15□□□□□ -0.01
COPS4-210ENST00000511708 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15□□□□□ -0.01
COPS4-210ENST00000511708 FLRT1Q9NZU1 646 aa15□□□□□ -0.01
COPS4-210ENST00000511708 ARIH1Q9Y4X5 557 aaPredicted RBP15□□□□□ -0.01
COPS4-210ENST00000511708 SIPA1L1O43166 1804 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms