RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 CCDC146Q8IYE0 955 aa8.67□□□□□ -1.02
COPS4-209ENST00000511653 GRAPLQ8TC17 118 aaPredicted RBP8.67□□□□□ -1.02
COPS4-209ENST00000511653 CHPF2Q9P2E5 772 aa8.67□□□□□ -1.02
COPS4-209ENST00000511653 TRMT112Q9UI30 125 aaKnown RBP8.67□□□□□ -1.02
COPS4-209ENST00000511653 AKAP11Q9UKA4 1901 aa8.67□□□□□ -1.02
COPS4-209ENST00000511653 SH3TC1Q8TE82 1336 aa8.67□□□□□ -1.02
COPS4-209ENST00000511653 CDHR2Q9BYE9 1310 aa8.67□□□□□ -1.02
COPS4-209ENST00000511653 BBOX1O75936 387 aa8.66□□□□□ -1.02
COPS4-209ENST00000511653 GDF10P55107 478 aa8.66□□□□□ -1.02
COPS4-209ENST00000511653 TCIRG1Q13488 830 aa8.66□□□□□ -1.02
COPS4-209ENST00000511653 HSP90AB3PQ58FF7 597 aa8.66□□□□□ -1.02
COPS4-209ENST00000511653 DDX46Q7L014 1031 aaKnown RBP8.66□□□□□ -1.02
COPS4-209ENST00000511653 SUPT20HQ8NEM7 779 aa8.66□□□□□ -1.02
COPS4-209ENST00000511653 ZIC5Q96T25 663 aa8.66□□□□□ -1.02
COPS4-209ENST00000511653 HINFPQ9BQA5 517 aa8.66□□□□□ -1.02
COPS4-209ENST00000511653 KLF16Q9BXK1 252 aaPredicted RBP8.66□□□□□ -1.02
COPS4-209ENST00000511653 TMX4Q9H1E5 349 aaPredicted RBP8.66□□□□□ -1.02
COPS4-209ENST00000511653 VPS33BQ9H267 617 aa8.66□□□□□ -1.02
COPS4-209ENST00000511653 ZNF408Q9H9D4 720 aa8.66□□□□□ -1.02
COPS4-209ENST00000511653 PGAP2Q9UHJ9 254 aa8.66□□□□□ -1.02
COPS4-209ENST00000511653 SERTAD1Q9UHV2 236 aa8.66□□□□□ -1.02
COPS4-209ENST00000511653 ZNF646O15015 1829 aaPredicted RBP8.66□□□□□ -1.02
COPS4-209ENST00000511653 MYH3P11055 1940 aa8.66□□□□□ -1.02
COPS4-209ENST00000511653 MKI67P46013 3256 aaKnown RBP8.66□□□□□ -1.02
COPS4-209ENST00000511653 EGFRP00533 1210 aa8.65□□□□□ -1.02
COPS4-209ENST00000511653 SERPINB4P48594 390 aa8.65□□□□□ -1.02
COPS4-209ENST00000511653 DHX9Q08211 1270 aaKnown RBP8.65□□□□□ -1.02
COPS4-209ENST00000511653 CELF1Q92879 486 aaKnown RBP8.65□□□□□ -1.02
COPS4-209ENST00000511653 ITPKCQ96DU7 683 aa8.65□□□□□ -1.02
COPS4-209ENST00000511653 BCL2L13Q9BXK5 485 aa8.65□□□□□ -1.02
COPS4-209ENST00000511653 PNNQ9H307 717 aaKnown RBP8.65□□□□□ -1.02
COPS4-209ENST00000511653 ZFAND3Q9H8U3 227 aa8.65□□□□□ -1.02
COPS4-209ENST00000511653 BABAM1Q9NWV8 329 aa8.65□□□□□ -1.02
COPS4-209ENST00000511653 BRCA2P51587 3418 aa8.65□□□□□ -1.02
COPS4-209ENST00000511653 MAP2K2P36507 400 aa8.65□□□□□ -1.03
COPS4-209ENST00000511653 FAM89AQ96GI7 184 aa8.65□□□□□ -1.03
COPS4-209ENST00000511653 DBNDD1Q9H9R9 158 aa8.65□□□□□ -1.03
COPS4-209ENST00000511653 CXXC1Q9P0U4 656 aaPredicted RBP8.65□□□□□ -1.03
COPS4-209ENST00000511653 CNOT7Q9UIV1 285 aaKnown RBP8.65□□□□□ -1.03
COPS4-209ENST00000511653 GNEQ9Y223 722 aaKnown RBP8.65□□□□□ -1.03
COPS4-209ENST00000511653 RTL9Q8NET4 1388 aa8.65□□□□□ -1.03
COPS4-209ENST00000511653 CCDC85CA6NKD9 419 aa8.64□□□□□ -1.03
COPS4-209ENST00000511653 PSMD14O00487 310 aa8.64□□□□□ -1.03
COPS4-209ENST00000511653 CHL1O00533 1208 aa8.64□□□□□ -1.03
COPS4-209ENST00000511653 EPHA4P54764 986 aa8.64□□□□□ -1.03
COPS4-209ENST00000511653 LMOD3Q0VAK6 560 aa8.64□□□□□ -1.03
COPS4-209ENST00000511653 TNIP1Q15025 636 aa8.64□□□□□ -1.03
COPS4-209ENST00000511653 ISCA1Q9BUE6 129 aa8.64□□□□□ -1.03
COPS4-209ENST00000511653 KCNQ5Q9NR82 932 aa8.64□□□□□ -1.03
COPS4-209ENST00000511653 LAS1LQ9Y4W2 734 aaKnown RBP8.64□□□□□ -1.03
COPS4-209ENST00000511653 USP3Q9Y6I4 520 aa8.64□□□□□ -1.03
COPS4-209ENST00000511653 INHAP05111 366 aa8.63□□□□□ -1.03
COPS4-209ENST00000511653 WEE1P30291 646 aa8.63□□□□□ -1.03
COPS4-209ENST00000511653 GPSM2P81274 684 aa8.63□□□□□ -1.03
COPS4-209ENST00000511653 FKBP5Q13451 457 aaPredicted RBP8.63□□□□□ -1.03
COPS4-209ENST00000511653 TBC1D10BQ4KMP7 808 aaPredicted RBP8.63□□□□□ -1.03
COPS4-209ENST00000511653 TBCELQ5QJ74 424 aa8.63□□□□□ -1.03
COPS4-209ENST00000511653 USP48Q86UV5 1035 aa8.63□□□□□ -1.03
COPS4-209ENST00000511653 PLBD2Q8NHP8 589 aa8.63□□□□□ -1.03
COPS4-209ENST00000511653 SNIP1Q8TAD8 396 aaKnown RBP8.63□□□□□ -1.03
COPS4-209ENST00000511653 HHIPL1Q96JK4 782 aa8.63□□□□□ -1.03
COPS4-209ENST00000511653 AGBL1Q96MI9 1066 aa8.63□□□□□ -1.03
COPS4-209ENST00000511653 MKNK1Q9BUB5 465 aa8.63□□□□□ -1.03
COPS4-209ENST00000511653 ARHGEF10LQ9HCE6 1279 aa8.63□□□□□ -1.03
COPS4-209ENST00000511653 TOR4AQ9NXH8 423 aa8.63□□□□□ -1.03
COPS4-209ENST00000511653 POLLQ9UGP5 575 aa8.63□□□□□ -1.03
COPS4-209ENST00000511653 NSFL1CQ9UNZ2 370 aaKnown RBP8.63□□□□□ -1.03
COPS4-209ENST00000511653 V9GY48 417 aaPredicted RBP8.63□□□□□ -1.03
COPS4-209ENST00000511653 ASTN2O75129 1339 aaPredicted RBP8.63□□□□□ -1.03
COPS4-209ENST00000511653 CEP290O15078 2479 aa8.63□□□□□ -1.03
COPS4-209ENST00000511653 ADM5C9JUS6 153 aa8.62□□□□□ -1.03
COPS4-209ENST00000511653 ECE2O60344 883 aa8.62□□□□□ -1.03
COPS4-209ENST00000511653 IL2RAP01589 272 aa8.62□□□□□ -1.03
COPS4-209ENST00000511653 SMPD1P17405 629 aa8.62□□□□□ -1.03
COPS4-209ENST00000511653 HUNKP57058 714 aa8.62□□□□□ -1.03
COPS4-209ENST00000511653 SF3B3Q15393 1217 aaKnown RBP8.62□□□□□ -1.03
COPS4-209ENST00000511653 CDC37L1Q7L3B6 337 aa8.62□□□□□ -1.03
COPS4-209ENST00000511653 MCOLN1Q9GZU1 580 aa8.62□□□□□ -1.03
COPS4-209ENST00000511653 SEPT3Q9UH03 358 aa8.62□□□□□ -1.03
COPS4-209ENST00000511653 WASF2Q9Y6W5 498 aa8.62□□□□□ -1.03
COPS4-209ENST00000511653 H7C1D1 291 aa8.62□□□□□ -1.03
COPS4-209ENST00000511653 RALBP1Q15311 655 aa8.62□□□□□ -1.03
COPS4-209ENST00000511653 TMCO4Q5TGY1 634 aa8.62□□□□□ -1.03
COPS4-209ENST00000511653 TAS1R3Q7RTX0 852 aa8.62□□□□□ -1.03
COPS4-209ENST00000511653 TMC4Q7Z404 712 aa8.62□□□□□ -1.03
COPS4-209ENST00000511653 TSPAN10Q9H1Z9 355 aaPredicted RBP8.62□□□□□ -1.03
COPS4-209ENST00000511653 RBM19Q9Y4C8 960 aaKnown RBP8.62□□□□□ -1.03
COPS4-209ENST00000511653 MYBBP1AQ9BQG0 1328 aaKnown RBP8.61□□□□□ -1.03
COPS4-209ENST00000511653 FAM155AB1AL88 458 aaPredicted RBP8.61□□□□□ -1.03
COPS4-209ENST00000511653 M0R2N6 131 aa8.61□□□□□ -1.03
COPS4-209ENST00000511653 IRS4O14654 1257 aaPredicted RBP8.61□□□□□ -1.03
COPS4-209ENST00000511653 TIMP2P16035 220 aa8.61□□□□□ -1.03
COPS4-209ENST00000511653 MFAP1P55081 439 aaKnown RBP8.61□□□□□ -1.03
COPS4-209ENST00000511653 KRT26Q7Z3Y9 468 aa8.61□□□□□ -1.03
COPS4-209ENST00000511653 TBC1D16Q8TBP0 767 aa8.61□□□□□ -1.03
COPS4-209ENST00000511653 DPF2Q92785 391 aa8.61□□□□□ -1.03
COPS4-209ENST00000511653 SEC31BQ9NQW1 1179 aa8.61□□□□□ -1.03
COPS4-209ENST00000511653 DBF4Q9UBU7 674 aaPredicted RBP8.61□□□□□ -1.03
COPS4-209ENST00000511653 CA12O43570 354 aa8.6□□□□□ -1.03
COPS4-209ENST00000511653 ZIC2O95409 532 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms