RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 BCL7CQ8WUZ0 217 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-208ENST00000511439 FANCD2OSQ96PS1 177 aa6.07□□□□□ -1.44
TOPBP1-208ENST00000511439 MKNK2Q9HBH9 465 aa6.07□□□□□ -1.44
TOPBP1-208ENST00000511439 TOP2AP11388 1531 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-208ENST00000511439 ASXL2Q76L83 1435 aa6.07□□□□□ -1.44
TOPBP1-208ENST00000511439 ARID1BQ8NFD5 2236 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-208ENST00000511439 P4HBP07237 508 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-208ENST00000511439 MAPK8P45983 427 aa6.06□□□□□ -1.44
TOPBP1-208ENST00000511439 ZNF157P51786 506 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-208ENST00000511439 FCGRTP55899 365 aa6.06□□□□□ -1.44
TOPBP1-208ENST00000511439 FAAP100Q0VG06 881 aa6.06□□□□□ -1.44
TOPBP1-208ENST00000511439 PLCL1Q15111 1095 aa6.06□□□□□ -1.44
TOPBP1-208ENST00000511439 ENOX2Q16206 610 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-208ENST00000511439 FBXO33Q7Z6M2 555 aa6.06□□□□□ -1.44
TOPBP1-208ENST00000511439 NETO1Q8TDF5 533 aa6.06□□□□□ -1.44
TOPBP1-208ENST00000511439 EPS8L3Q8TE67 593 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-208ENST00000511439 EMILIN2Q9BXX0 1053 aa6.06□□□□□ -1.44
TOPBP1-208ENST00000511439 LGR6Q9HBX8 967 aa6.06□□□□□ -1.44
TOPBP1-208ENST00000511439 PCOLCE2Q9UKZ9 415 aa6.06□□□□□ -1.44
TOPBP1-208ENST00000511439 YEATS2Q9ULM3 1422 aa6.06□□□□□ -1.44
TOPBP1-208ENST00000511439 ADAMTS12P58397 1594 aa6.06□□□□□ -1.44
TOPBP1-208ENST00000511439 PNMA6FA0A0J9YX94 578 aa6.05□□□□□ -1.44
TOPBP1-208ENST00000511439 ZNF862O60290 1169 aa6.05□□□□□ -1.44
TOPBP1-208ENST00000511439 RNGTTO60942 597 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-208ENST00000511439 FAM87AP0C7U9 286 aa6.05□□□□□ -1.44
TOPBP1-208ENST00000511439 EAPPQ56P03 285 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-208ENST00000511439 ARHGAP27Q6ZUM4 889 aa6.05□□□□□ -1.44
TOPBP1-208ENST00000511439 WDR89Q96FK6 387 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-208ENST00000511439 KRTAP9-9Q9BYP9 154 aa6.05□□□□□ -1.44
TOPBP1-208ENST00000511439 KRTAP9-4Q9BYQ2 154 aa6.05□□□□□ -1.44
TOPBP1-208ENST00000511439 ZC3H12CQ9C0D7 883 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-208ENST00000511439 DISC1Q9NRI5 854 aa6.05□□□□□ -1.44
TOPBP1-208ENST00000511439 PCDHGC5Q9Y5F6 944 aa6.05□□□□□ -1.44
TOPBP1-208ENST00000511439 CFAP43Q8NDM7 1665 aa6.04□□□□□ -1.44
TOPBP1-208ENST00000511439 ABCA5Q8WWZ7 1642 aa6.04□□□□□ -1.44
TOPBP1-208ENST00000511439 CDK5R2Q13319 367 aa6.04□□□□□ -1.44
TOPBP1-208ENST00000511439 TTLL4Q14679 1199 aa6.04□□□□□ -1.44
TOPBP1-208ENST00000511439 OGFOD2Q6N063 350 aa6.04□□□□□ -1.44
TOPBP1-208ENST00000511439 POU5F2Q8N7G0 328 aa6.04□□□□□ -1.44
TOPBP1-208ENST00000511439 KCNB2Q92953 911 aa6.04□□□□□ -1.44
TOPBP1-208ENST00000511439 BCO2Q9BYV7 579 aa6.04□□□□□ -1.44
TOPBP1-208ENST00000511439 VAV3Q9UKW4 847 aa6.04□□□□□ -1.44
TOPBP1-208ENST00000511439 BCORL1Q5H9F3 1711 aa6.04□□□□□ -1.44
TOPBP1-208ENST00000511439 ABCC2Q92887 1545 aa6.04□□□□□ -1.44
TOPBP1-208ENST00000511439 LTBP4Q8N2S1 1624 aa6.03□□□□□ -1.44
TOPBP1-208ENST00000511439 PTPRTO14522 1441 aa6.03□□□□□ -1.44
TOPBP1-208ENST00000511439 LDHBP07195 334 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-208ENST00000511439 NME2P22392 152 aa6.03□□□□□ -1.44
TOPBP1-208ENST00000511439 ARNTP27540 789 aa6.03□□□□□ -1.44
TOPBP1-208ENST00000511439 ERVK-24P63145 666 aa6.03□□□□□ -1.44
TOPBP1-208ENST00000511439 PRKCQQ04759 706 aa6.03□□□□□ -1.44
TOPBP1-208ENST00000511439 IFI16Q16666 785 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-208ENST00000511439 ALG1LQ6GMV1 187 aa6.03□□□□□ -1.44
TOPBP1-208ENST00000511439 PDZD3Q86UT5 571 aa6.03□□□□□ -1.44
TOPBP1-208ENST00000511439 SULF2Q8IWU5 870 aa6.03□□□□□ -1.44
TOPBP1-208ENST00000511439 SETDB2Q96T68 719 aa6.03□□□□□ -1.44
TOPBP1-208ENST00000511439 SRCIN1Q9C0H9 1055 aa6.03□□□□□ -1.44
TOPBP1-208ENST00000511439 SSU72Q9NP77 194 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-208ENST00000511439 WWC3Q9ULE0 1092 aa6.03□□□□□ -1.44
TOPBP1-208ENST00000511439 SAMM50Q9Y512 469 aa6.03□□□□□ -1.44
TOPBP1-208ENST00000511439 RIMS1Q86UR5 1692 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-208ENST00000511439 EPRSP07814 1512 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-208ENST00000511439 TMEM265A0A087WTH1 108 aa6.02□□□□□ -1.45
TOPBP1-208ENST00000511439 PRPF40AO75400 957 aaKnown RBP6.02□□□□□ -1.45
TOPBP1-208ENST00000511439 HCLS1P14317 486 aaPredicted RBP6.02□□□□□ -1.45
TOPBP1-208ENST00000511439 FZD5Q13467 585 aa6.02□□□□□ -1.45
TOPBP1-208ENST00000511439 ZNF792Q3KQV3 632 aa6.02□□□□□ -1.45
TOPBP1-208ENST00000511439 PLD6Q8N2A8 252 aaKnown RBP6.02□□□□□ -1.45
TOPBP1-208ENST00000511439 RNF214Q8ND24 703 aa6.02□□□□□ -1.45
TOPBP1-208ENST00000511439 FBF1Q8TES7 1133 aa6.02□□□□□ -1.45
TOPBP1-208ENST00000511439 BCL2L13Q9BXK5 485 aa6.02□□□□□ -1.45
TOPBP1-208ENST00000511439 AKAP2Q9Y2D5 859 aa6.02□□□□□ -1.45
TOPBP1-208ENST00000511439 KRTAP4-8A0A0G2JLE6 195 aa6.01□□□□□ -1.45
TOPBP1-208ENST00000511439 FUT4P22083 530 aa6.01□□□□□ -1.45
TOPBP1-208ENST00000511439 FGD1P98174 961 aa6.01□□□□□ -1.45
TOPBP1-208ENST00000511439 ATP2B2Q01814 1243 aa6.01□□□□□ -1.45
TOPBP1-208ENST00000511439 TAGLNQ01995 201 aaKnown RBP6.01□□□□□ -1.45
TOPBP1-208ENST00000511439 ZC3H12AQ5D1E8 599 aaKnown RBP6.01□□□□□ -1.45
TOPBP1-208ENST00000511439 ATG4DQ86TL0 474 aaPredicted RBP6.01□□□□□ -1.45
TOPBP1-208ENST00000511439 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.01□□□□□ -1.45
TOPBP1-208ENST00000511439 ACSBG1Q96GR2 724 aa6.01□□□□□ -1.45
TOPBP1-208ENST00000511439 DUSP23Q9BVJ7 150 aa6.01□□□□□ -1.45
TOPBP1-208ENST00000511439 CEP44Q9C0F1 390 aa6.01□□□□□ -1.45
TOPBP1-208ENST00000511439 RBM47A0AV96 593 aaKnown RBP6□□□□□ -1.45
TOPBP1-208ENST00000511439 PAPLNO95428 1278 aa6□□□□□ -1.45
TOPBP1-208ENST00000511439 CEACAM5P06731 702 aa6□□□□□ -1.45
TOPBP1-208ENST00000511439 GSTT1P30711 240 aa6□□□□□ -1.45
TOPBP1-208ENST00000511439 HSPA1LP34931 641 aa6□□□□□ -1.45
TOPBP1-208ENST00000511439 LARP7Q4G0J3 582 aaKnown RBP eCLIP6□□□□□ -1.45
TOPBP1-208ENST00000511439 MAP1SQ66K74 1059 aaPredicted RBP6□□□□□ -1.45
TOPBP1-208ENST00000511439 SCARA3Q6AZY7 606 aa6□□□□□ -1.45
TOPBP1-208ENST00000511439 ZNF574Q6ZN55 896 aaPredicted RBP6□□□□□ -1.45
TOPBP1-208ENST00000511439 SPRED2Q7Z698 418 aa6□□□□□ -1.45
TOPBP1-208ENST00000511439 FAM181AQ8N9Y4 354 aa6□□□□□ -1.45
TOPBP1-208ENST00000511439 GIPC2Q8TF65 315 aa6□□□□□ -1.45
TOPBP1-208ENST00000511439 HRASLS5Q96KN8 279 aa6□□□□□ -1.45
TOPBP1-208ENST00000511439 GTF2IRD1Q9UHL9 959 aa6□□□□□ -1.45
TOPBP1-208ENST00000511439 PPM1HQ9ULR3 514 aa6□□□□□ -1.45
TOPBP1-208ENST00000511439 SNX11Q9Y5W9 270 aa6□□□□□ -1.45
TOPBP1-208ENST00000511439 FHAD1B1AJZ9 1412 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms