RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 RSBN1LQ6PCB5 846 aaPredicted RBP17.82■□□□□ 0.44
SCLT1-209ENST00000511426 NSUN7Q8NE18 718 aaKnown RBP17.82■□□□□ 0.44
SCLT1-209ENST00000511426 ZSCAN10Q96SZ4 725 aaPredicted RBP17.82■□□□□ 0.44
SCLT1-209ENST00000511426 HDAC9Q9UKV0 1011 aa17.82■□□□□ 0.44
SCLT1-209ENST00000511426 BRPF3Q9ULD4 1205 aa17.82■□□□□ 0.44
SCLT1-209ENST00000511426 SLC12A7Q9Y666 1083 aa17.82■□□□□ 0.44
SCLT1-209ENST00000511426 TACC3Q9Y6A5 838 aa17.82■□□□□ 0.44
SCLT1-209ENST00000511426 SCN9AQ15858 1988 aa17.81■□□□□ 0.44
SCLT1-209ENST00000511426 ZBTB43O43298 467 aa17.81■□□□□ 0.44
SCLT1-209ENST00000511426 USP17L8P0C7I0 530 aa17.81■□□□□ 0.44
SCLT1-209ENST00000511426 ZSCAN22P10073 491 aaPredicted RBP17.81■□□□□ 0.44
SCLT1-209ENST00000511426 NFXL1Q6ZNB6 911 aa17.81■□□□□ 0.44
SCLT1-209ENST00000511426 MAPKAPK5Q8IW41 473 aa17.81■□□□□ 0.44
SCLT1-209ENST00000511426 FAM184AQ8NB25 1140 aa17.81■□□□□ 0.44
SCLT1-209ENST00000511426 AGBL3Q8NEM8 1001 aa17.81■□□□□ 0.44
SCLT1-209ENST00000511426 ZNF277Q9NRM2 450 aaPredicted RBP17.81■□□□□ 0.44
SCLT1-209ENST00000511426 TCP11L1Q9NUJ3 509 aa17.81■□□□□ 0.44
SCLT1-209ENST00000511426 ZDHHC9Q9Y397 364 aa17.81■□□□□ 0.44
SCLT1-209ENST00000511426 COL2A1P02458 1487 aaPredicted RBP17.81■□□□□ 0.44
SCLT1-209ENST00000511426 PSDA5PKW4 1024 aaPredicted RBP17.8■□□□□ 0.44
SCLT1-209ENST00000511426 F8W031 263 aaPredicted RBP17.8■□□□□ 0.44
SCLT1-209ENST00000511426 CPLX1O14810 134 aa17.8■□□□□ 0.44
SCLT1-209ENST00000511426 CALM1P0DP23 149 aa17.8■□□□□ 0.44
SCLT1-209ENST00000511426 CALM2P0DP24 149 aa17.8■□□□□ 0.44
SCLT1-209ENST00000511426 CALM3P0DP25 149 aa17.8■□□□□ 0.44
SCLT1-209ENST00000511426 METAP2P50579 478 aaKnown RBP eCLIP17.8■□□□□ 0.44
SCLT1-209ENST00000511426 SEC23AQ15436 765 aa17.8■□□□□ 0.44
SCLT1-209ENST00000511426 LARP1BQ659C4 914 aaKnown RBP17.8■□□□□ 0.44
SCLT1-209ENST00000511426 C16orf86Q6ZW13 317 aa17.8■□□□□ 0.44
SCLT1-209ENST00000511426 KIAA0825Q8IV33 1275 aa17.8■□□□□ 0.44
SCLT1-209ENST00000511426 JDP2Q8WYK2 163 aa17.8■□□□□ 0.44
SCLT1-209ENST00000511426 IDI2Q9BXS1 227 aa17.8■□□□□ 0.44
SCLT1-209ENST00000511426 DHX36Q9H2U1 1008 aaKnown RBP17.8■□□□□ 0.44
SCLT1-209ENST00000511426 USP40Q9NVE5 1235 aa17.8■□□□□ 0.44
SCLT1-209ENST00000511426 HPS5Q9UPZ3 1129 aa17.8■□□□□ 0.44
SCLT1-209ENST00000511426 CDK5RAP2Q96SN8 1893 aa17.8■□□□□ 0.44
SCLT1-209ENST00000511426 TNKSO95271 1327 aa17.8■□□□□ 0.44
SCLT1-209ENST00000511426 CYP2D7A0A087X1C5 515 aa17.8■□□□□ 0.44
SCLT1-209ENST00000511426 PTPDC1A2A3K4 754 aa17.8■□□□□ 0.44
SCLT1-209ENST00000511426 RANBP6O60518 1105 aaKnown RBP17.8■□□□□ 0.44
SCLT1-209ENST00000511426 WDHD1O75717 1129 aaPredicted RBP17.8■□□□□ 0.44
SCLT1-209ENST00000511426 PKP1Q13835 747 aa17.8■□□□□ 0.44
SCLT1-209ENST00000511426 CDC42EP5Q6NZY7 148 aa17.8■□□□□ 0.44
SCLT1-209ENST00000511426 KCNQ5Q9NR82 932 aa17.8■□□□□ 0.44
SCLT1-209ENST00000511426 PPP1R1BQ9UD71 204 aaPredicted RBP17.8■□□□□ 0.44
SCLT1-209ENST00000511426 SWAP70Q9UH65 585 aa17.8■□□□□ 0.44
SCLT1-209ENST00000511426 NAP1L2Q9ULW6 460 aaPredicted RBP17.8■□□□□ 0.44
SCLT1-209ENST00000511426 TSPY2A6NKD2 308 aa17.79■□□□□ 0.44
SCLT1-209ENST00000511426 BAG4O95429 457 aaKnown RBP17.79■□□□□ 0.44
SCLT1-209ENST00000511426 SCNN1DP51172 638 aa17.79■□□□□ 0.44
SCLT1-209ENST00000511426 DGKHQ86XP1 1220 aa17.79■□□□□ 0.44
SCLT1-209ENST00000511426 OGFOD1Q8N543 542 aa17.79■□□□□ 0.44
SCLT1-209ENST00000511426 GMLQ99445 158 aa17.79■□□□□ 0.44
SCLT1-209ENST00000511426 MXD3Q9BW11 206 aa17.79■□□□□ 0.44
SCLT1-209ENST00000511426 EHD4Q9H223 541 aa17.79■□□□□ 0.44
SCLT1-209ENST00000511426 MKNK2Q9HBH9 465 aa17.79■□□□□ 0.44
SCLT1-209ENST00000511426 INCENPQ9NQS7 918 aa17.79■□□□□ 0.44
SCLT1-209ENST00000511426 ARFGEF1Q9Y6D6 1849 aa17.79■□□□□ 0.44
SCLT1-209ENST00000511426 DDAH1O94760 285 aa17.78■□□□□ 0.44
SCLT1-209ENST00000511426 HLA-DOAP06340 250 aa17.78■□□□□ 0.44
SCLT1-209ENST00000511426 IFIT1BQ5T764 474 aaKnown RBP17.78■□□□□ 0.44
SCLT1-209ENST00000511426 ZNF444Q8N0Y2 327 aaPredicted RBP17.78■□□□□ 0.44
SCLT1-209ENST00000511426 ANKS1AQ92625 1134 aa17.78■□□□□ 0.44
SCLT1-209ENST00000511426 OSBPL5Q9H0X9 879 aaPredicted RBP17.78■□□□□ 0.44
SCLT1-209ENST00000511426 GPHNQ9NQX3 736 aaPredicted RBP17.78■□□□□ 0.44
SCLT1-209ENST00000511426 NFKBIEO00221 500 aa17.77■□□□□ 0.44
SCLT1-209ENST00000511426 CTDNEP1O95476 244 aa17.77■□□□□ 0.44
SCLT1-209ENST00000511426 CYP2D6P10635 497 aa17.77■□□□□ 0.44
SCLT1-209ENST00000511426 CCT2P78371 535 aaKnown RBP17.77■□□□□ 0.44
SCLT1-209ENST00000511426 NBR1Q14596 966 aa17.77■□□□□ 0.44
SCLT1-209ENST00000511426 TNIP1Q15025 636 aa17.77■□□□□ 0.44
SCLT1-209ENST00000511426 ENAHQ8N8S7 591 aaPredicted RBP17.77■□□□□ 0.44
SCLT1-209ENST00000511426 MTMR14Q8NCE2 650 aa17.77■□□□□ 0.44
SCLT1-209ENST00000511426 MAP3K14Q99558 947 aa17.77■□□□□ 0.44
SCLT1-209ENST00000511426 MTMR6Q9Y217 621 aa17.77■□□□□ 0.44
SCLT1-209ENST00000511426 BCS1LQ9Y276 419 aa17.77■□□□□ 0.44
SCLT1-209ENST00000511426 STK36Q9NRP7 1315 aa17.77■□□□□ 0.44
SCLT1-209ENST00000511426 GOLGA8AA7E2F4 631 aa17.77■□□□□ 0.43
SCLT1-209ENST00000511426 PSMD14O00487 310 aa17.77■□□□□ 0.43
SCLT1-209ENST00000511426 F13A1P00488 732 aa17.77■□□□□ 0.43
SCLT1-209ENST00000511426 RPS12P25398 132 aaKnown RBP17.77■□□□□ 0.43
SCLT1-209ENST00000511426 PLCD1P51178 756 aa17.77■□□□□ 0.43
SCLT1-209ENST00000511426 GABPAQ06546 454 aa17.77■□□□□ 0.43
SCLT1-209ENST00000511426 PPP4R3BQ5MIZ7 849 aa17.77■□□□□ 0.43
SCLT1-209ENST00000511426 CATIPQ7Z7H3 387 aa17.77■□□□□ 0.43
SCLT1-209ENST00000511426 ZNF654Q8IZM8 581 aa17.77■□□□□ 0.43
SCLT1-209ENST00000511426 NKX2-3Q8TAU0 364 aa17.77■□□□□ 0.43
SCLT1-209ENST00000511426 RBM28Q9NW13 759 aaKnown RBP17.77■□□□□ 0.43
SCLT1-209ENST00000511426 PLIN4Q96Q06 1357 aa17.77■□□□□ 0.43
SCLT1-209ENST00000511426 COL4A5P29400 1685 aa17.76■□□□□ 0.43
SCLT1-209ENST00000511426 ENTPD3O75355 529 aa17.76■□□□□ 0.43
SCLT1-209ENST00000511426 SKOR2Q2VWA4 1001 aaPredicted RBP17.76■□□□□ 0.43
SCLT1-209ENST00000511426 CIAPIN1Q6FI81 312 aa17.76■□□□□ 0.43
SCLT1-209ENST00000511426 MICU3Q86XE3 530 aa17.76■□□□□ 0.43
SCLT1-209ENST00000511426 ECM29Q5VYK3 1845 aa17.76■□□□□ 0.43
SCLT1-209ENST00000511426 ATRNL1Q5VV63 1379 aa17.75■□□□□ 0.43
SCLT1-209ENST00000511426 JAK2O60674 1132 aa17.75■□□□□ 0.43
SCLT1-209ENST00000511426 PRDM1O75626 825 aa17.75■□□□□ 0.43
SCLT1-209ENST00000511426 TSPY3P0CV98 308 aa17.75■□□□□ 0.43
SCLT1-209ENST00000511426 TSPY8P0CW00 308 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms