RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 POLR3DP05423 398 aaPredicted RBP15.41■□□□□ 0.06
COL6A6-203ENST00000511332 MAP3K10Q02779 954 aa15.41■□□□□ 0.06
COL6A6-203ENST00000511332 NMIQ13287 307 aaPredicted RBP15.41■□□□□ 0.06
COL6A6-203ENST00000511332 MCMDC2Q4G0Z9 681 aa15.41■□□□□ 0.06
COL6A6-203ENST00000511332 BMP2KLQ5H9B9 411 aa15.41■□□□□ 0.06
COL6A6-203ENST00000511332 CCDC102AQ96A19 550 aa15.41■□□□□ 0.06
COL6A6-203ENST00000511332 CAPNS2Q96L46 248 aa15.41■□□□□ 0.06
COL6A6-203ENST00000511332 FAM227BQ96M60 508 aa15.41■□□□□ 0.06
COL6A6-203ENST00000511332 SEC62Q99442 399 aaKnown RBP15.41■□□□□ 0.06
COL6A6-203ENST00000511332 NACAP1Q9BZK3 213 aa15.41■□□□□ 0.06
COL6A6-203ENST00000511332 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.41■□□□□ 0.06
COL6A6-203ENST00000511332 TAOK2Q9UL54 1235 aa15.41■□□□□ 0.06
COL6A6-203ENST00000511332 RAD50Q92878 1312 aa15.41■□□□□ 0.06
COL6A6-203ENST00000511332 SLC10A3P09131 477 aa15.4■□□□□ 0.06
COL6A6-203ENST00000511332 MAP3K9P80192 1104 aa15.4■□□□□ 0.06
COL6A6-203ENST00000511332 VGLL4Q14135 290 aa15.4■□□□□ 0.06
COL6A6-203ENST00000511332 RASAL3Q86YV0 1011 aa15.4■□□□□ 0.06
COL6A6-203ENST00000511332 FOXP4Q8IVH2 680 aaPredicted RBP15.4■□□□□ 0.06
COL6A6-203ENST00000511332 SERPINB13Q9UIV8 391 aa15.4■□□□□ 0.06
COL6A6-203ENST00000511332 ZNF112Q9UJU3 913 aa15.4■□□□□ 0.06
COL6A6-203ENST00000511332 CCDC171Q6TFL3 1326 aa15.4■□□□□ 0.06
COL6A6-203ENST00000511332 WDR33Q9C0J8 1336 aaKnown RBP15.4■□□□□ 0.06
COL6A6-203ENST00000511332 GSG1L2A8MUP6 293 aa15.39■□□□□ 0.05
COL6A6-203ENST00000511332 APPP05067 770 aa15.39■□□□□ 0.05
COL6A6-203ENST00000511332 TDO2P48775 406 aa15.39■□□□□ 0.05
COL6A6-203ENST00000511332 NOGQ13253 232 aa15.39■□□□□ 0.05
COL6A6-203ENST00000511332 GRM1Q13255 1194 aa15.39■□□□□ 0.05
COL6A6-203ENST00000511332 SLC4A8Q2Y0W8 1093 aa15.39■□□□□ 0.05
COL6A6-203ENST00000511332 NOL9Q5SY16 702 aaKnown RBP15.39■□□□□ 0.05
COL6A6-203ENST00000511332 CYP4F22Q6NT55 531 aa15.39■□□□□ 0.05
COL6A6-203ENST00000511332 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.39■□□□□ 0.05
COL6A6-203ENST00000511332 METTL16Q86W50 562 aaKnown RBP15.39■□□□□ 0.05
COL6A6-203ENST00000511332 SKAP1Q86WV1 359 aa15.39■□□□□ 0.05
COL6A6-203ENST00000511332 RUFY2Q8WXA3 655 aa15.39■□□□□ 0.05
COL6A6-203ENST00000511332 ROBO3Q96MS0 1386 aa15.38■□□□□ 0.05
COL6A6-203ENST00000511332 PATL2C9JE40 543 aaKnown RBP15.38■□□□□ 0.05
COL6A6-203ENST00000511332 ZBTB48P10074 688 aaPredicted RBP15.38■□□□□ 0.05
COL6A6-203ENST00000511332 VEGFBP49765 207 aa15.38■□□□□ 0.05
COL6A6-203ENST00000511332 CWC27Q6UX04 472 aaKnown RBP15.38■□□□□ 0.05
COL6A6-203ENST00000511332 CCDC129Q6ZRS4 1044 aa15.38■□□□□ 0.05
COL6A6-203ENST00000511332 DNAJC5GQ8N7S2 189 aa15.38■□□□□ 0.05
COL6A6-203ENST00000511332 SLC10A4Q96EP9 437 aa15.38■□□□□ 0.05
COL6A6-203ENST00000511332 CLMNQ96JQ2 1002 aa15.38■□□□□ 0.05
COL6A6-203ENST00000511332 SNCAIPQ9Y6H5 919 aa15.38■□□□□ 0.05
COL6A6-203ENST00000511332 ZMYM6O95789 1325 aa15.38■□□□□ 0.05
COL6A6-203ENST00000511332 FAM196BA6NMK8 535 aa15.37■□□□□ 0.05
COL6A6-203ENST00000511332 PHF20L1A8MW92 1017 aa15.37■□□□□ 0.05
COL6A6-203ENST00000511332 FAM155AB1AL88 458 aaPredicted RBP15.37■□□□□ 0.05
COL6A6-203ENST00000511332 CTNND1O60716 968 aaKnown RBP15.37■□□□□ 0.05
COL6A6-203ENST00000511332 INPP5BP32019 993 aa15.37■□□□□ 0.05
COL6A6-203ENST00000511332 SBK1Q52WX2 424 aa15.37■□□□□ 0.05
COL6A6-203ENST00000511332 ZNF589Q86UQ0 364 aaPredicted RBP15.37■□□□□ 0.05
COL6A6-203ENST00000511332 SCYL3Q8IZE3 742 aa15.37■□□□□ 0.05
COL6A6-203ENST00000511332 ZKSCAN4Q969J2 545 aaPredicted RBP15.37■□□□□ 0.05
COL6A6-203ENST00000511332 NAPBQ9H115 298 aa15.37■□□□□ 0.05
COL6A6-203ENST00000511332 DNAJC18Q9H819 358 aa15.37■□□□□ 0.05
COL6A6-203ENST00000511332 ELP3Q9H9T3 547 aa15.37■□□□□ 0.05
COL6A6-203ENST00000511332 EPB41L4AQ9HCS5 686 aaPredicted RBP15.37■□□□□ 0.05
COL6A6-203ENST00000511332 PICK1Q9NRD5 415 aa15.37■□□□□ 0.05
COL6A6-203ENST00000511332 SWAP70Q9UH65 585 aa15.37■□□□□ 0.05
COL6A6-203ENST00000511332 GREB1LQ9C091 1923 aaPredicted RBP15.37■□□□□ 0.05
COL6A6-203ENST00000511332 LOC285556D6RIA3 1793 aa15.36■□□□□ 0.05
COL6A6-203ENST00000511332 CEP350Q5VT06 3117 aa15.36■□□□□ 0.05
COL6A6-203ENST00000511332 SPDYE5A6NIY4 337 aa15.36■□□□□ 0.05
COL6A6-203ENST00000511332 USP17L12C9JPN9 530 aa15.36■□□□□ 0.05
COL6A6-203ENST00000511332 USP17L21D6R901 530 aa15.36■□□□□ 0.05
COL6A6-203ENST00000511332 CHMLP26374 656 aa15.36■□□□□ 0.05
COL6A6-203ENST00000511332 PLCD1P51178 756 aa15.36■□□□□ 0.05
COL6A6-203ENST00000511332 C12orf60Q5U649 245 aa15.36■□□□□ 0.05
COL6A6-203ENST00000511332 CTR9Q6PD62 1173 aa15.36■□□□□ 0.05
COL6A6-203ENST00000511332 ERO1BQ86YB8 467 aa15.36■□□□□ 0.05
COL6A6-203ENST00000511332 IFNL3Q8IZI9 196 aa15.36■□□□□ 0.05
COL6A6-203ENST00000511332 OPTNQ96CV9 577 aa15.36■□□□□ 0.05
COL6A6-203ENST00000511332 WNK4Q96J92 1243 aa15.36■□□□□ 0.05
COL6A6-203ENST00000511332 CYP2D6P10635 497 aa15.35■□□□□ 0.05
COL6A6-203ENST00000511332 MAP2K2P36507 400 aa15.35■□□□□ 0.05
COL6A6-203ENST00000511332 GABPAQ06546 454 aa15.35■□□□□ 0.05
COL6A6-203ENST00000511332 SPRYD7Q5W111 196 aa15.35■□□□□ 0.05
COL6A6-203ENST00000511332 CASC1Q6TDU7 716 aa15.35■□□□□ 0.05
COL6A6-203ENST00000511332 GINM1Q9NU53 330 aa15.35■□□□□ 0.05
COL6A6-203ENST00000511332 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.35■□□□□ 0.05
COL6A6-203ENST00000511332 SLURP2P0DP57 97 aa15.34■□□□□ 0.05
COL6A6-203ENST00000511332 HSPD1P10809 573 aaKnown RBP15.34■□□□□ 0.05
COL6A6-203ENST00000511332 CAP2P40123 477 aa15.34■□□□□ 0.05
COL6A6-203ENST00000511332 PPATQ06203 517 aa15.34■□□□□ 0.05
COL6A6-203ENST00000511332 PPIL2Q13356 520 aa15.34■□□□□ 0.05
COL6A6-203ENST00000511332 ALX1Q15699 326 aa15.34■□□□□ 0.05
COL6A6-203ENST00000511332 VPS53Q5VIR6 699 aa15.34■□□□□ 0.05
COL6A6-203ENST00000511332 TATDN1Q6P1N9 297 aa15.34■□□□□ 0.05
COL6A6-203ENST00000511332 C16orf86Q6ZW13 317 aa15.34■□□□□ 0.05
COL6A6-203ENST00000511332 REM2Q8IYK8 340 aaPredicted RBP15.34■□□□□ 0.05
COL6A6-203ENST00000511332 OTUD5Q96G74 571 aa15.34■□□□□ 0.05
COL6A6-203ENST00000511332 TBC1D2Q9BYX2 928 aa15.34■□□□□ 0.05
COL6A6-203ENST00000511332 ZNF287Q9HBT7 754 aa15.34■□□□□ 0.05
COL6A6-203ENST00000511332 MYH4Q9Y623 1939 aa15.33■□□□□ 0.05
COL6A6-203ENST00000511332 CYP2D7A0A087X1C5 515 aa15.33■□□□□ 0.04
COL6A6-203ENST00000511332 MINDY4BA8MYZ0 360 aa15.33■□□□□ 0.04
COL6A6-203ENST00000511332 FOXP2O15409 715 aa15.33■□□□□ 0.04
COL6A6-203ENST00000511332 AOC2O75106 756 aa15.33■□□□□ 0.04
COL6A6-203ENST00000511332 SLC3A2P08195 630 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms