RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 FANCLQ9NW38 375 aa7.89□□□□□ -1.15
HMGB1P47-201ENST00000511281 CORINQ9Y5Q5 1042 aa7.89□□□□□ -1.15
HMGB1P47-201ENST00000511281 CCDC85CA6NKD9 419 aa7.88□□□□□ -1.15
HMGB1P47-201ENST00000511281 DNAJA2O60884 412 aa7.88□□□□□ -1.15
HMGB1P47-201ENST00000511281 CHMP4BP1P59074 171 aa7.88□□□□□ -1.15
HMGB1P47-201ENST00000511281 SQSTM1Q13501 440 aa7.88□□□□□ -1.15
HMGB1P47-201ENST00000511281 NCAPHQ15003 741 aa7.88□□□□□ -1.15
HMGB1P47-201ENST00000511281 PPP2R5EQ16537 467 aa7.88□□□□□ -1.15
HMGB1P47-201ENST00000511281 MTERF2Q49AM1 385 aa7.88□□□□□ -1.15
HMGB1P47-201ENST00000511281 MRM1Q6IN84 353 aaKnown RBP7.88□□□□□ -1.15
HMGB1P47-201ENST00000511281 CHSY3Q70JA7 882 aa7.88□□□□□ -1.15
HMGB1P47-201ENST00000511281 NLRC3Q7RTR2 1065 aa7.88□□□□□ -1.15
HMGB1P47-201ENST00000511281 SYNPOQ8N3V7 929 aa7.88□□□□□ -1.15
HMGB1P47-201ENST00000511281 GALNT11Q8NCW6 608 aa7.88□□□□□ -1.15
HMGB1P47-201ENST00000511281 ZCRB1Q8TBF4 217 aaKnown RBP7.88□□□□□ -1.15
HMGB1P47-201ENST00000511281 PHAXQ9H814 394 aaKnown RBP7.88□□□□□ -1.15
HMGB1P47-201ENST00000511281 OIP5O43482 229 aa7.87□□□□□ -1.15
HMGB1P47-201ENST00000511281 NID1P14543 1247 aa7.87□□□□□ -1.15
HMGB1P47-201ENST00000511281 LIG1P18858 919 aa7.87□□□□□ -1.15
HMGB1P47-201ENST00000511281 PLCG1P19174 1290 aa7.87□□□□□ -1.15
HMGB1P47-201ENST00000511281 CDC25BP30305 580 aa7.87□□□□□ -1.15
HMGB1P47-201ENST00000511281 CCNFP41002 786 aa7.87□□□□□ -1.15
HMGB1P47-201ENST00000511281 LONRF2Q1L5Z9 754 aa7.87□□□□□ -1.15
HMGB1P47-201ENST00000511281 C6orf15Q6UXA7 325 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P47-201ENST00000511281 UNC5AQ6ZN44 842 aa7.87□□□□□ -1.15
HMGB1P47-201ENST00000511281 C16orf86Q6ZW13 317 aa7.87□□□□□ -1.15
HMGB1P47-201ENST00000511281 EDARADDQ8WWZ3 215 aa7.87□□□□□ -1.15
HMGB1P47-201ENST00000511281 ELMO3Q96BJ8 720 aa7.87□□□□□ -1.15
HMGB1P47-201ENST00000511281 WDR89Q96FK6 387 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P47-201ENST00000511281 BTBD6Q96KE9 485 aa7.87□□□□□ -1.15
HMGB1P47-201ENST00000511281 WDR18Q9BV38 432 aa7.87□□□□□ -1.15
HMGB1P47-201ENST00000511281 CARD10Q9BWT7 1032 aa7.87□□□□□ -1.15
HMGB1P47-201ENST00000511281 WNT10AQ9GZT5 417 aa7.87□□□□□ -1.15
HMGB1P47-201ENST00000511281 EPN3Q9H201 632 aa7.87□□□□□ -1.15
HMGB1P47-201ENST00000511281 ZMYM5Q9UJ78 669 aa7.87□□□□□ -1.15
HMGB1P47-201ENST00000511281 LTBP3Q9NS15 1303 aa7.86□□□□□ -1.15
HMGB1P47-201ENST00000511281 ESYT3A0FGR9 886 aa7.86□□□□□ -1.15
HMGB1P47-201ENST00000511281 ADAM11O75078 769 aa7.86□□□□□ -1.15
HMGB1P47-201ENST00000511281 DDAH1O94760 285 aa7.86□□□□□ -1.15
HMGB1P47-201ENST00000511281 KRT76Q01546 638 aa7.86□□□□□ -1.15
HMGB1P47-201ENST00000511281 PDE3AQ14432 1141 aa7.86□□□□□ -1.15
HMGB1P47-201ENST00000511281 EEPD1Q7L9B9 569 aa7.86□□□□□ -1.15
HMGB1P47-201ENST00000511281 SLFN12Q8IYM2 578 aa7.86□□□□□ -1.15
HMGB1P47-201ENST00000511281 FEZ1Q99689 392 aa7.86□□□□□ -1.15
HMGB1P47-201ENST00000511281 B2RBV5 119 aa7.85□□□□□ -1.15
HMGB1P47-201ENST00000511281 FANCGO15287 622 aa7.85□□□□□ -1.15
HMGB1P47-201ENST00000511281 AOC2O75106 756 aa7.85□□□□□ -1.15
HMGB1P47-201ENST00000511281 ADAMTS2O95450 1211 aa7.85□□□□□ -1.15
HMGB1P47-201ENST00000511281 SLFN14P0C7P3 912 aa7.85□□□□□ -1.15
HMGB1P47-201ENST00000511281 SLURP2P0DP57 97 aa7.85□□□□□ -1.15
HMGB1P47-201ENST00000511281 ZYXQ15942 572 aaKnown RBP7.85□□□□□ -1.15
HMGB1P47-201ENST00000511281 FOXD4L6Q3SYB3 417 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P47-201ENST00000511281 FOXD4L3Q6VB84 417 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P47-201ENST00000511281 Q6ZNB5 142 aa7.85□□□□□ -1.15
HMGB1P47-201ENST00000511281 C8orf86Q6ZUL3 223 aa7.85□□□□□ -1.15
HMGB1P47-201ENST00000511281 SLC9A7Q96T83 725 aa7.85□□□□□ -1.15
HMGB1P47-201ENST00000511281 NOP58Q9Y2X3 529 aaKnown RBP7.85□□□□□ -1.15
HMGB1P47-201ENST00000511281 MEGF11A6BM72 1044 aa7.84□□□□□ -1.15
HMGB1P47-201ENST00000511281 DCDC2CA8MYV0 355 aa7.84□□□□□ -1.15
HMGB1P47-201ENST00000511281 DNAJC6O75061 913 aa7.84□□□□□ -1.15
HMGB1P47-201ENST00000511281 DLGAP3O95886 979 aa7.84□□□□□ -1.15
HMGB1P47-201ENST00000511281 GRK4P32298 578 aa7.84□□□□□ -1.15
HMGB1P47-201ENST00000511281 NTF4P34130 210 aa7.84□□□□□ -1.15
HMGB1P47-201ENST00000511281 CD68P34810 354 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P47-201ENST00000511281 CAP2P40123 477 aa7.84□□□□□ -1.15
HMGB1P47-201ENST00000511281 ZC3H12BQ5HYM0 836 aaKnown RBP7.84□□□□□ -1.15
HMGB1P47-201ENST00000511281 ZBTB37Q5TC79 503 aa7.84□□□□□ -1.15
HMGB1P47-201ENST00000511281 SPATC1Q76KD6 591 aa7.84□□□□□ -1.15
HMGB1P47-201ENST00000511281 MCATQ8IVS2 390 aaKnown RBP7.84□□□□□ -1.15
HMGB1P47-201ENST00000511281 MRPL41Q8IXM3 137 aaKnown RBP7.84□□□□□ -1.15
HMGB1P47-201ENST00000511281 GALNT6Q8NCL4 622 aa7.84□□□□□ -1.15
HMGB1P47-201ENST00000511281 ACSF2Q96CM8 615 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P47-201ENST00000511281 SLKQ9H2G2 1235 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P47-201ENST00000511281 SPC25Q9HBM1 224 aa7.84□□□□□ -1.15
HMGB1P47-201ENST00000511281 IFT57Q9NWB7 429 aa7.84□□□□□ -1.15
HMGB1P47-201ENST00000511281 ZNF214Q9UL59 606 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P47-201ENST00000511281 HIF3AQ9Y2N7 669 aa7.84□□□□□ -1.15
HMGB1P47-201ENST00000511281 LEMD3Q9Y2U8 911 aa7.84□□□□□ -1.15
HMGB1P47-201ENST00000511281 ERBB4Q15303 1308 aa7.83□□□□□ -1.16
HMGB1P47-201ENST00000511281 KDM2BQ8NHM5 1336 aa7.83□□□□□ -1.16
HMGB1P47-201ENST00000511281 DIAPH1O60610 1272 aaKnown RBP7.83□□□□□ -1.16
HMGB1P47-201ENST00000511281 DEAF1O75398 565 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P47-201ENST00000511281 PGRP06401 933 aa7.83□□□□□ -1.16
HMGB1P47-201ENST00000511281 IBSPP21815 317 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P47-201ENST00000511281 NLRP12P59046 1061 aa7.83□□□□□ -1.16
HMGB1P47-201ENST00000511281 EXOSC6Q5RKV6 272 aaKnown RBP7.83□□□□□ -1.16
HMGB1P47-201ENST00000511281 VHLLQ6RSH7 139 aa7.83□□□□□ -1.16
HMGB1P47-201ENST00000511281 KLHL6Q8WZ60 621 aa7.83□□□□□ -1.16
HMGB1P47-201ENST00000511281 USP26Q9BXU7 913 aa7.83□□□□□ -1.16
HMGB1P47-201ENST00000511281 TMPRSS13Q9BYE2 586 aa7.83□□□□□ -1.16
HMGB1P47-201ENST00000511281 CRIM1Q9NZV1 1036 aa7.83□□□□□ -1.16
HMGB1P47-201ENST00000511281 hCG_2014768A0A024R1R8 64 aa7.82□□□□□ -1.16
HMGB1P47-201ENST00000511281 SHISA8B8ZZ34 492 aa7.82□□□□□ -1.16
HMGB1P47-201ENST00000511281 TMPRSS2O15393 492 aa7.82□□□□□ -1.16
HMGB1P47-201ENST00000511281 BCRP11274 1271 aa7.82□□□□□ -1.16
HMGB1P47-201ENST00000511281 HOXB4P17483 251 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P47-201ENST00000511281 ZNF143P52747 638 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P47-201ENST00000511281 IGBP1P78318 339 aa7.82□□□□□ -1.16
HMGB1P47-201ENST00000511281 ID3Q02535 119 aa7.82□□□□□ -1.16
HMGB1P47-201ENST00000511281 SSRP1Q08945 709 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms